Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0001100 | OGI:03002090 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:769048-778327 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atcgtctctctctcttctcttcctcgtttcagtcaccagtccacccgcggtctcgtacgcgcgacacgagtcaacgaccgacggcgatcgccggaggtggggggcggcacggcggggggtctctgctcagcgtggggggtggggccaccatggtgaggagcgggagtgtgcggcggacggccgcgtcgtcgtcgcccgccgcggcggcggtgccgacggccttcaccgcctcgtccggcgactaccgccttctggaggaggtcggctacggcgcgaacgccgtcgtgtaccgggcggtgttcctgccatccaaccggaccgtcgccgtcaagtgcctggatctcgatcgtgtcaacagtaacctcgtgagctttctctccccctctctctctctcgatcgaaactccctcactcgttcgtgtcctagggattccggtggtgatcgctgttttgatcgggggatatgcggtcgtgcaggggaggattcgatgcagttgagctgtgtgtgttgtgtcaagttgggacaatttgatccaattaaagttgtttattctattgatcagtattgacgtggtaccaacttaagaattaggttgtggtaactgtgctttgcggagtcgggatttagctccactcacttatgctattcattttagcaaatttttagttcgatcgttcgtattgttcattttgtcggttactttttattaggttttgtggctatatcgagacaacgtggggttccttatccatgggcactttaattcatcctcggcctaacttcatagatagtggatggttaacttcacaaaggcctacatttaattcttccgggcagtgcatttgcggcttataggatgacatgcagttgtcttgggttactgatccagtaaattagatgtataggacgttgtggtatagcttgtttgcttgtagtacttttcacctttgttgcattggatcatgaatgcgtctatttttctttctatcttaatgctaagtagtaggattcatgaatattacctgcagtaaattaattatatacatttactgttataggctgatgtttgaggtctcttaatgatcctctccccaagttcaataatgtatttagcatctcatagtggtatatatacatattgtacccaggatgatataagaaaagaggcacaaacgatgagcttgatagatcaccctaatgtcatcagggcttactgctcatttgttgtggatcataacctctgggtgataatgccattcatgtcagagggttcatgtttacacctgatgaaggttgcatatcctgatggttttgaggagcctgttatcgcctctatcctaaaggaaacacttaaggctctagagtacctccatcggcaaggacatatccatagggatgtcaaggttagcttctacagtagtattcattttagctaactttgtcagttgctttgctcagcgtaatattatacaggcgggtaatatccttatggacagtcctggtatagtgaaacttggggactttggtgtctctgcttgtatgtttgatagaggtgatagacaaagatccaggaatacattcgtgggaacaccatgctggtaactggagttttcttacgttttctctgttgtatgtacaataagtgttctgcaaacctttaaacgtgttttctgctgtcatttggtctttaggatggctccagaagttctccagcctggagcaggatataatttcaagtacgttggtaatatcataaccttgttccgttagctaccagtatcctggttattttgaaaaagttaatttcaatatttagatattaatttcaatatttagataaaattgtgtttcttaaaatattttaccaggAaatatgcttcaaaccatttgtttaccaacttaatttggttatttaaaatttccttaagggtaagaactctaactaccataaaaatactgggaataaggtatattttggtatcaaatgcttcagtgaaccattggcagataactaaaacattctttctttcttctgtcgttgcactcaacatgtaactgcagtgctgcttgtgttcaaacattctgtattttctactatatatgtctttatattttacttggttgctattgtactgttgaggtgcacagtgcgctcacaactatttgtccttgtacagagctgacatatggtcttttggaataactgcactggagctagcacatggccatgctcccttctcgaagtatcctcccatgaaggcaatgaattattttatcttttgcaaattgaaacctttttattaaaagaaaaagagtgacagtctaattaacaagtgcatggtcagccaaatatctatgtgtcttatattcaaattttcacatggttagtgtttgctgccagggatgatgtttttgtgatttttgtatgtcatgttgggctagaaaacatatgtactttgcacttgcaatacatgttctgtcatttgtatacaatcccatatactacatgcacatacattcttctcgtgaaattacttgttcggactttaaagttactgccgatgaacagcgttatccatgcagttagcaatatgcctgtagaacattcttgttcatagaaaacaatcttgggtttaggatcctacaaatacaaactttctgctgaactgaggatgtttatgttttgccagaatctgaggatgtttatgtggtctgtaggttcttctcatgacccttcaaaatgcaccaccaggccttgactatgaccgtgataaaagattctcaaaggtagtactagtcctttcagctaattcttggctagcgagtctatgttttatggcagtatctgcttgttttagcctcaatgtttacctcctaatgaaggcttttcagttgtaatcagtctttcaaggaaatggttgcaatgtgcctggtcaaagatcaaacaaagaggccaacggctgaaaagttactaaagcactcatttttcaagaacgcaaaacctccagagctgactgttaagagtattttaactgatttgCcccctctgtgggatcgtgtaaaagcgctccaggTtttgctagtttactttccttttgtttttacttaatgatggaaacattatgccttaattaattcctgttatcctgtgcatttgcagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacaggaggcactttctatggtttgtgattttgatgtttcttttaagttccactttgttttgtgctgttctttcatttgagttcatgaaaatatgctagctagtttattttacccacaaacttctgaaataggctttatggtggtattatatatattcattttacaggcaaatcttctgctttgtttttaatttattatcactgaccataccagtcttaatgattttggtcagtagatgcagcttaaaaacaaatttgtagagggccagggtcaatttgcagtaacacaaatcccagcccttgcaaaatgaagttagaactgtggtattactttcatgcatggatatgttattggttgaacaaggactagcacagaatgatttaagatcccagcatattagactaatgtttgatgcttttttaatttaaaaattaaaatgacgttaaatttttttatcacttgtatgctatggtgtcactatatttatgctaagaatatgatgtctaagacacatttcagccaacgcaatgatttgtacgagagatcactttagctagtccaccttacaggcagtagctaacttctatttttctttcacttgttagctccatggacgtaataccctaatgatttttgcacttctgttccacatacaaactaatattcatgataaacatagtttggtttattatagatatgtttgcacttttatttcacttacatgatagtttccttatcatctgaattatctaatagagtgagtaccaaagaggcgtaagcgcatggaacttcgatattgaggatttaaaggctcaagcatcattggtaaaacaaccagtttctttagttctatatcgaaatgctacattgctctctgattcattctgttacattgctaagatgtaaaatgactgtaatttagtcttataagtgagatttccaacctttttgcagattcatgatgatgatccacctgaaataaaggaagatgttgacaatgatagaataaatgaagctgataaggttagctgctctcgacttgattttgtttcagacgtaggcttgcgttctggtaagacagggtaataactgtagctagatgggatcatgagaaaactttatctagtgtgtcaaatagaagaagtatcacacatgtttaacttcaaagcacagaaaagagcttgccgtttatcaaatttgaaaagtcagggtcatttgtaatgccacaaatgcttctgtttaaatctggaagatgcttatgttctgatcctgttattgtttctcgctaattctgagtgctgcagaaacatttgcacaccatgttgtcatagcttattgatttcttgtaagtaagacaaaattatgtaccaaatatgattctgtttcaagtcatttatgattgctctgtttgcaggagccgttttctggcaatcattttggacaaccaaaaattttgagtggaaagcacttcaggttgaatcagtatgcaatatttttttgtggcaatgttttctttaaaagatatagatgttctatattgttccctagcttgtgattctcaacatcaccaatcgaagtatataggattcaagttttattttatgtggtgtagggtgaaattttggtcttataaattaaaacaagcgaaagattcagtgagccttgatgcatgcttttctgtgttactggtagtgtgttcataatgttccactcttttgttacatttcagtgaacaaacttgtgtcactgcagtaagtccaggtgggaatatgcatgagacaagcagaggattggtttctgaacctggtgatgctgatagtgaaaggaaagttgatggatatagaaaacaagggtcagaaaacgaatcgttaccctctacatcaaaacatgattctgaaggacaaaacagtagtagtgaagttaaacaaaaagaaaggacttgctctggcccaattccgtgttctggtgtacataataaatcaataactgaaagcagccgcatttttgataggtaagcctaacaattttcactgtttttttttcctattccaattttaatattacttggctgctacaatgttgtgcataccaataatttaatgcatgttttttttggactttcctgtttgaaatattacatatgaatatgcctcagaaatgaaacggtacagtttaagatgcttttttCccccttaaaatcggctaatatttgagctttcaagtgtcgttagttcttaaatgtttgacttaggtcatgcaataattgattttatagaaacaaattagtagttattcttcttgaatttgtatacctgagtttcctgtgagtactgttatgaagttaggaggtttcataatttttttgctgaaacaaattgctcaaaaaggcatttgcatacctgagtttcctgtgagtactgttatgaagttaggaggtttcataatttttttgctgaaacaaattgctcaaaaaggcgtttgcattttaaaagcacttttggttattgttattccttgctgcagggaagcggcagttaagttggcatctgataaacaaaagagttgtacaaaaagaaccacaaatctcagtggtcctcttgcactccctactcgtgcttctgcaaatagtctgtctgctcctattcggtcttctggaggtaggaagcagccagtacttttttggatgcacatgataagcagcagtcacgtgttaatattattaacatagcaaatgaccacatttaaggtttacagacttttgtaacataaattagatcatttgaattcactgtggttatgaactgaaggaaagtatatgattatctgcctgttatttgcaggctatgtgggctccttgggagataagtctaagcgtagtgtggtggagataaaaggacgtttttcagtgacatctgagaatgtggatcttgcaaaggtaggtttcgttctgagcatacacttcaataggttgtgctccagactgagcaagatcactacaagggatactaattaaaatcttacttgacaggttcaggaagttccaacaagcggcatttcacgcaaattacaggaggtaagaatttgtgccctatccattttattgaaagctctgttgtactctacagtctacactacttcaaaacccacatccagccatcaagtgtcatgacttgagttgctcagggatcttcactgagaaaatcagccagcgttggtcattggccggtggatgctaagccaatggtaagcttttcaatgtcaataatgtaccaacttgtagaaactaattacttactgtgatttggtattcagacaaaaacTGttttttttttcttggagagaatgctggttgggaatttcttagtgaaatgtttcctgcatctgaataaaaccttacaagttttgaatactagggtttgattaagggcattgttctgtacttctgtttctattgtcatgtcattgtctggatcttaatgttttctgaaaatactagtagtatattcttcatatcatttaagacacttatctccgatttttgagccactagatgatttagaaaggcaaccaagtttcaacccttttaacatatcattttagtattttcttttcagtgacacttgctacagaactatatatctctggctagtgcagctcatgcaattgcaatggccttcttgttcttatacagtttccactgcccttgtgccttctccatgctttaagattgttcacaatagataacatttttcccccatcgatgctgcagtcgaatagtcatcagcggaaggaactctgcaatggttcagtatctgcgtccgttctgattccccatctacggaatcttgtacagcagaccacatttcagcaagtatgggagtagcttaatctagtgacctctaagtatgggcagtataattaattgcagtattttgagttttttgcaaactaaacattctccatttccttcacttaggatctcatcacaaacctcctaagtagcttgcaacagaatgagaaagctgacggtaaatactttcctctgtatttgctgaaagtttttttcgcctttatttacgattaaatcgtttgttttctccagcaacacagtatagacttggtaatatggatggtgatacagaggtaagaagcttattagcttggtgtcaaaatttttcccacatatcattcttttctattagtctgtacatagtctgtacaaagaattctcaatactgctaccaaatgttcattaactcaaagtttgctcacaatcatttggcaggttgaaacgtctatttccgagggagaacggtcattacttgtcaaaatatttgaattgcaatctaggtaggtttgttacttgcaactgatatttaggggtggtaattgcatccttacatccgtggtgcttatgcccattcctctaccgtaaccatgctttcccagtcgtcacggactcaggtcaccaccttgtaccattgaagtacaagtgaatttcttagttttcctcatcaacttaagctttatattaagctggctggtgcatgcaactcataagtcatatgcaactcaacatgtgtgaatccaaagggagcctccacgttagagaggggtgcatggattgaagcatttgtgaagagttcattgttctccatcagtttaatcttttggatgaatttccaacctggtattcaatgttaccagctaccaaaacattgccttgtattcataactcaaccaaactggcaaacctcaaactattggatatagctgccatagtattatgtttatgctctgttttatgctcaaatcaagacttgaacatgacatgtgtttaaggcagtgggagtagtctagatagtgatgcttgctttagcgccgccggtgtaaatcgcggcgagctgtaaaatgtgcaggtccttagtctgtaggatgaccgaccagggcaagttgcctcaacaactctgttgttgttcgtaacatggctctccttccatcttaataaaaattgatcggcatttattccgctggcctggcgaaagaaaaaatggcgcgtgttattagaacatctatttttcatgccaatggttgcctgatgatcaatgcagtaacatacctttctaccttgcagaatgatttcattaaccgacgaactgatcacaacaaaactgcaacatgtccaggtcagtaagtcatgtctgtttagttttcttcactgtattgacacctgaggtcacctacaataaggatcattctatttagaccatatggtactttactAaaaatgccaaattgtgggggagggggcaaaacctattttataaatatataggacaatagtgaacattaaacatggcacccatgaagttagtcaattttaatcctaacatggacaccatgtacatttgataatcattatatatgatggatctctatcatcactttcagctacaagaagagctaaaaatactgtactgtcacgaagaaataatcgacactagggaggtggacaatgcttgacatgttaaggttgagccagattctttttattagtacaagcagtattcaggcgactaaaagttttgcctgcactggctcatgcctggaggcttggctaatcggattccaacaaggtgtttgaggtgcgctgttaggaagggaggaaaactgagaggtgccatggattcgtcttgggaatctgcatcgaactgttgaggagatgagagctctttgagatgcatagcaagaaaggctgctcgatgatggccagcttgggtttatgtatgtttgtgtatatttgttcgatctacttaattacttgggattatatttatttattcgggggactagtgtaaggtggttatgagagactgcggtatccatatagtatttcgggccgcgcttatcattaagaattgagatggccatggatgccaatcttggccaatatagtatagaaccaatgagctgcgagactggattattgtatttatagaccaccagaatatattgtttatatgttgttaattagtacagtgtcagtattatagctaaatttgccctttcttc
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| CDS seq | atggtgaggagcgggagtgtgcggcggacggccgcgtcgtcgtcgcccgccgcggcggcggtgccgacggccttcaccgcctcgtccggcgactaccgccttctggaggaggtcggctacggcgcgaacgccgtcgtgtaccgggcggtgttcctgccatccaaccggaccgtcgccgtcaagtgcctggatctcgatcgtgtcaacagtaacctcgatgatataagaaaagaggcacaaacgatgagcttgatagatcaccctaatgtcatcagggcttactgctcatttgttgtggatcataacctctgggtgataatgccattcatgtcagagggttcatgtttacacctgatgaaggttgcatatcctgatggttttgaggagcctgttatcgcctctatcctaaaggaaacacttaaggctctagagtacctccatcggcaaggacatatccatagggatgtcaaggcgggtaatatccttatggacagtcctggtatagtgaaacttggggactttggtgtctctgcttgtatgtttgatagaggtgatagacaaagatccaggaatacattcgtgggaacaccatgctggatggctccagaagttcttctcatgacccttcaaaatgcaccaccaggccttgactatgaccgtgataaaagattctcaaagtctttcaaggaaatggttgcaatgtgcctggtcaaagatcaaacaaagaggccaacggctgaaaagttactaaagcactcatttttcaagaacgcaaaacctccagagctgactgttaagagtattttaactgatttgCcccctctgtgggatcgtgtaaaagcgctccagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacaggaggcactttctatgagtgagtaccaaagaggcgtaagcgcatggaacttcgatattgaggatttaaaggctcaagcatcattgattcatgatgatgatccacctgaaataaaggaagatgttgacaatgatagaataaatgaagctgataaggagccgttttctggcaatcattttggacaaccaaaaattttgagtggaaagcacttcagtgaacaaacttgtgtcactgcagtaagtccaggtgggaatatgcatgagacaagcagaggattggtttctgaacctggtgatgctgatagtgaaaggaaagttgatggatatagaaaacaagggtcagaaaacgaatcgttaccctctacatcaaaacatgattctgaaggacaaaacagtagtagtgaagttaaacaaaaagaaaggacttgctctggcccaattccgtgttctggtgtacataataaatcaataactgaaagcagccgcatttttgatagggaagcggcagttaagttggcatctgataaacaaaagagttgtacaaaaagaaccacaaatctcagtggtcctcttgcactccctactcgtgcttctgcaaatagtctgtctgctcctattcggtcttctggaggctatgtgggctccttgggagataagtctaagcgtagtgtggtggagataaaaggacgtttttcagtgacatctgagaatgtggatcttgcaaaggttcaggaagttccaacaagcggcatttcacgcaaattacaggagggatcttcactgagaaaatcagccagcgttggtcattggccggtggatgctaagccaatgtcgaatagtcatcagcggaaggaactctgcaatggttcagtatctgcgtccgttctgattccccatctacggaatcttgtacagcagaccacatttcagcaagatctcatcacaaacctcctaagtagcttgcaacagaatgagaaagctgacgcaacacagtatagacttggtaatatggatggtgatacagaggttgaaacgtctatttccgagggagaacggtcattacttgtcaaaatatttgaattgcaatctagaatgatttcattaaccgacgaactgatcacaacaaaactgcaacatgtccagctacaagaagagctaaaaatactgtactgtcacgaagaaataatcgacactagggaggtggacaatgcttga
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| Protein seq | MVRSGSVRRTAASSSPAAAAVPTAFTASSGDYRLLEEVGYGANAVVYRAVFLPSNRTVAVKCLDLDRVNSNLDDIRKEAQTMSLIDHPNVIRAYCSFVVDHNLWVIMPFMSEGSCLHLMKVAYPDGFEEPVIASILKETLKALEYLHRQGHIHRDVKAGNILMDSPGIVKLGDFGVSACMFDRGDRQRSRNTFVGTPCWMAPEVLLMTLQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPELTVKSILTDLPPLWDRVKALQLKDAAQLALKKMPSSEQEALSMSEYQRGVSAWNFDIEDLKAQASLIHDDDPPEIKEDVDNDRINEADKEPFSGNHFGQPKILSGKHFSEQTCVTAVSPGGNMHETSRGLVSEPGDADSERKVDGYRKQGSENESLPSTSKHDSEGQNSSSEVKQKERTCSGPIPCSGVHNKSITESSRIFDREAAVKLASDKQKSCTKRTTNLSGPLALPTRASANSLSAPIRSSGGYVGSLGDKSKRSVVEIKGRFSVTSENVDLAKVQEVPTSGISRKLQEGSSLRKSASVGHWPVDAKPMSNSHQRKELCNGSVSASVLIPHLRNLVQQTTFQQDLITNLLSSLQQNEKADATQYRLGNMDGDTEVETSISEGERSLLVKIFELQSRMISLTDELITTKLQHVQLQEELKILYCHEEIIDTREVDNA |
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| Function | Serine/threonine-protein kinase fray2 [UniProtKB/Swiss-Prot:Q551H4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0001100 | OsNaBo_03g0001100.01 | Chr03 | 769054 | 778310 | + | NAM | ||
| CDS seq | atggtgaggagcgggagtgtgcggcggacggccgcgtcgtcgtcgcccgccgcggcggcggtgccgacggccttcaccgcctcgtccggcgactaccgccttctggaggaggtcggctacggcgcgaacgccgtcgtgtaccgggcggtgttcctgccatccaaccggaccgtcgccgtcaagtgcctggatctcgatcgtgtcaacagtaacctcgatgatataagaaaagaggcacaaacgatgagcttgatagatcaccctaatgtcatcagggcttactgctcatttgttgtggatcataacctctgggtgataatgccattcatgtcagagggttcatgtttacacctgatgaaggttgcatatcctgatggttttgaggagcctgttatcgcctctatcctaaaggaaacacttaaggctctagagtacctccatcggcaaggacatatccatagggatgtcaaggcgggtaatatccttatggacagtcctggtatagtgaaacttggggactttggtgtctctgcttgtatgtttgatagaggtgatagacaaagatccaggaatacattcgtgggaacaccatgctggatggctccagaagttcttctcatgacccttcaaaatgcaccaccaggccttgactatgaccgtgataaaagattctcaaagtctttcaaggaaatggttgcaatgtgcctggtcaaagatcaaacaaagaggccaacggctgaaaagttactaaagcactcatttttcaagaacgcaaaacctccagagctgactgttaagagtattttaactgatttgCcccctctgtgggatcgtgtaaaagcgctccagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacaggaggcactttctatgagtgagtaccaaagaggcgtaagcgcatggaacttcgatattgaggatttaaaggctcaagcatcattgattcatgatgatgatccacctgaaataaaggaagatgttgacaatgatagaataaatgaagctgataaggagccgttttctggcaatcattttggacaaccaaaaattttgagtggaaagcacttcagtgaacaaacttgtgtcactgcagtaagtccaggtgggaatatgcatgagacaagcagaggattggtttctgaacctggtgatgctgatagtgaaaggaaagttgatggatatagaaaacaagggtcagaaaacgaatcgttaccctctacatcaaaacatgattctgaaggacaaaacagtagtagtgaagttaaacaaaaagaaaggacttgctctggcccaattccgtgttctggtgtacataataaatcaataactgaaagcagccgcatttttgatagggaagcggcagttaagttggcatctgataaacaaaagagttgtacaaaaagaaccacaaatctcagtggtcctcttgcactccctactcgtgcttctgcaaatagtctgtctgctcctattcggtcttctggaggctatgtgggctccttgggagataagtctaagcgtagtgtggtggagataaaaggacgtttttcagtgacatctgagaatgtggatcttgcaaaggttcaggaagttccaacaagcggcatttcacgcaaattacaggagggatcttcactgagaaaatcagccagcgttggtcattggccggtggatgctaagccaatgtcgaatagtcatcagcggaaggaactctgcaatggttcagtatctgcgtccgttctgattccccatctacggaatcttgtacagcagaccacatttcagcaagatctcatcacaaacctcctaagtagcttgcaacagaatgagaaagctgacgcaacacagtatagacttggtaatatggatggtgatacagaggttgaaacgtctatttccgagggagaacggtcattacttgtcaaaatatttgaattgcaatctagaatgatttcattaaccgacgaactgatcacaacaaaactgcaacatgtccagctacaagaagagctaaaaatactgtactgtcacgaagaaataatcgacactagggaggtggacaatgcttga
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| Protein seq | MVRSGSVRRTAASSSPAAAAVPTAFTASSGDYRLLEEVGYGANAVVYRAVFLPSNRTVAVKCLDLDRVNSNLDDIRKEAQTMSLIDHPNVIRAYCSFVVDHNLWVIMPFMSEGSCLHLMKVAYPDGFEEPVIASILKETLKALEYLHRQGHIHRDVKAGNILMDSPGIVKLGDFGVSACMFDRGDRQRSRNTFVGTPCWMAPEVLLMTLQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPELTVKSILTDLPPLWDRVKALQLKDAAQLALKKMPSSEQEALSMSEYQRGVSAWNFDIEDLKAQASLIHDDDPPEIKEDVDNDRINEADKEPFSGNHFGQPKILSGKHFSEQTCVTAVSPGGNMHETSRGLVSEPGDADSERKVDGYRKQGSENESLPSTSKHDSEGQNSSSEVKQKERTCSGPIPCSGVHNKSITESSRIFDREAAVKLASDKQKSCTKRTTNLSGPLALPTRASANSLSAPIRSSGGYVGSLGDKSKRSVVEIKGRFSVTSENVDLAKVQEVPTSGISRKLQEGSSLRKSASVGHWPVDAKPMSNSHQRKELCNGSVSASVLIPHLRNLVQQTTFQQDLITNLLSSLQQNEKADATQYRLGNMDGDTEVETSISEGERSLLVKIFELQSRMISLTDELITTKLQHVQLQEELKILYCHEEIIDTREVDNA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0001100 | OsNaBo_03g0001100.02 | Chr03 | 769048 | 778327 | + | IsoSeq | ||
| CDS seq | tcgtctctctctcttctcttcctcgtttcagtcaccagtccacccgcggtctcgtacgcgcgacacgagtcaacgaccgacggcgatcgccggaggtggggggcggcacggcggggggtctctgctcagcgtggggggtggggccaccatggtgaggagcgggagtgtgcggcggacggccgcgtcgtcgtcgcccgccgcggcggcggtgccgacggccttcaccgcctcgtccggcgactaccgccttctggaggaggtcggctacggcgcgaacgccgtcgtgtaccgggcggtgttcctgccatccaaccggaccgtcgccgtcaagtgcctggatctcgatcgtgtcaa
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| Protein seq | SSLSLLFLVSVTSPPAVSYARHESTTDGDRRRWGAARRGVSAQRGGWGHHGEERECAADGRVVVARRGGGADGLHRLVRRLPPSGGGRLRRERRRVPGGVPAIQPDRRRQVPGSRSCQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr03 | 773728 | 774008 | + | OsNaBo_03g0001100.01 | OsNaBo_03g0001100.01,OsNaBo_03g0001100.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.712140 | 33.032021 | 13.268733 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0114300 | RBH | 1.387228 | 0.994340 | 7.575572 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g02320 | RBH | 0.976499 | 0.652905 | 2.026262 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0114300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0001210 | RBH | 0.777044 | 17.086143 | 7.216916 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0001190 | RBH | 0.226079 | 8.041684 | 3.673242 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0001210 | RBH | 2.222706 | 12.134805 | 14.389498 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0001200 | RBH | 0.153479 | 0.417510 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0001220 | RBH | 10.871791 | 21.138678 | 19.536688 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0012800 | RBH | 4.6409795 | 26.8685165 | 10.0585135 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0001200 | RBH | 0.228625 | 1.256065 | 1.940464 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0012300 | RBH | 6.6714175 | 25.1504995 | 10.4789375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0001250 | RBH | 0.170474 | 0.564795 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0001270 | RBH | 0.453697 | 14.660518 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0001220 | RBH | 4.827790 | 71.169258 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0001230 | RBH | 0.760337 | 3.458165 | 1.925440 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0001240 | RBH | 0.250390 | 7.138045 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G001250 | RBH | 0.343173 | 4.405288 | 3.163935 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017380 | RBH | 1.633839 | 45.257668 | 11.966325 |
