Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0025410 | OGI:08052770 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:26814540-26815046 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggattcagattctctcaaccttgcaattcgaataatgttCcaacaagaagttgagagatttcacAacacaaactaccttggttggaggcatttcattaaccaagattttggggtaacattgcatgcaataaacaatatatttctttcatcaataaaaatataaattcaatgattctttctgtattgtcagatgtacgcgctagctggtgaggaattttgggaagctagccatcaacttgcacacttctcgggcccagaggtagtatagatgtttcagaaagccccctggtgagtacaaattgcagttcgtagattgtagaaactcttgtaaacaacagtacagaagtagtcccactgaaaaacctaaactttgcatatactgattcctgttcacctattcaatcattacgtgctgtacgtatttaacatggagagcaagaagttatcggtgcttgattcactaacacagaagatccactcggggaatcacgttccccaggcatga
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| CDS seq | atggattcagattctctcaaccttgcaattcgaataatgttCcaacaagaagttgagagatttcacAacacaaactaccttggttggaggcatttcattaaccaagattttgggatgtacgcgctagctggtgaggaattttgggaagctagccatcaacttgcacacttctcgggcccagagagcaagaagttatcggtgcttgattcactaacacagaagatccactcggggaatcacgttccccaggcatga |
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| Protein seq | MDSDSLNLAIRIMFQQEVERFHNTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHFSGPESKKLSVLDSLTQKIHSGNHVPQA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0025410 | OsNaBo_02g0025410.01 | Chr02 | 26814540 | 26815046 | + | NAM | ||
| CDS seq | atggattcagattctctcaaccttgcaattcgaataatgttCcaacaagaagttgagagatttcacAacacaaactaccttggttggaggcatttcattaaccaagattttgggatgtacgcgctagctggtgaggaattttgggaagctagccatcaacttgcacacttctcgggcccagagagcaagaagttatcggtgcttgattcactaacacagaagatccactcggggaatcacgttccccaggcatga
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| Protein seq | MDSDSLNLAIRIMFQQEVERFHNTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHFSGPESKKLSVLDSLTQKIHSGNHVPQA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g40940 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0025570 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025720 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0040250 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0039720 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025240 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0312300 | SBH | 0.7616705 | 0.4634385 | 0.0556815 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025080 | SBH | 0.0 | 0.0 | 0.049902 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0320600 | SBH | 0.027595 | 0.081159 | 0.0302005 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0013370 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0033130 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0025430 | SBH | 0.453954 | 2.551353 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025330 | SBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0013460 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025500 | SBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0014680 | RBH | 0.0 | 0.0 | 0.0 |
