Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0009690 | OGI:02021740 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:7402331-7403408 | ||||||||
| Gene Symbol | ERF38, OsERF#038, OsERF038, OsERF38, AP2/EREBP#082, AP2/EREBP82, OsDREB4-1 | ||||||||||
| DNA seq | atgccggagctggaggtgtgtagccctgcgtcgtcgggtggggcgtcgccgccggagtcgccggtggaggggaggaggggaggaggaggaggggagaagagggggagatcaggggatggcgggaggcacccgtcgtaccgcggcgtgcggatgcgggcgtgggggaagtgggtgtcggagatcagggagccccggaagaagtcgcgcatctggctcggcacgttcccgacgccggagatggccgcgcgcgcccacgacgccgccgcactcgtcgtcaagggccccgccgccgtcctcaacttcccggacatggccgcctcgctcccgcgcgcggcctccgcctccccgtgcgacgtccaggccgccgccgcccgcgccgccgccatggagcccccccagccgccgccgtcgtcgctcaccgtgcaggccgactccgccgccgccgcattcctgacgcccaagaacggcggtgtcagcggcgccggcgcggcggacgacgagctcgaggcgatcgtcgagctgccgcggctcgacgagctggacgccgccgagctcgtgttcggcgccgcgttccaggacacggcggcggaacacccgtggtgcgaccccgtctggatcgacggcggctacgcggcggccgcggcggcggcggcggcggccgcggcgcacgacgacctgttcggcctcgacgccgaccaccatggatgggcccagtcggttggtgccctcttatggaacctgtgattcgatcataataataattaatctctaattaattaccaagtaattaacagctctagcttctttaattttaatctctccttttttttccagcttcctaaatctgtacataggtttccagttttttttcttctttttttaatcttttttcaggcaggcttaatatatatttctgcttgattttttcccctttcgtttcaagtgtcctgtagctttgcctttttgttcagtttggggctcttgtcttctgaatttgtcttccctcttgcctagtggctctacctgcagagtgtcaactaagctaagtcattaatgacttaattatgtataataaaaa
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| CDS seq | atgccggagctggaggtgtgtagccctgcgtcgtcgggtggggcgtcgccgccggagtcgccggtggaggggaggaggggaggaggaggaggggagaagagggggagatcaggggatggcgggaggcacccgtcgtaccgcggcgtgcggatgcgggcgtgggggaagtgggtgtcggagatcagggagccccggaagaagtcgcgcatctggctcggcacgttcccgacgccggagatggccgcgcgcgcccacgacgccgccgcactcgtcgtcaagggccccgccgccgtcctcaacttcccggacatggccgcctcgctcccgcgcgcggcctccgcctccccgtgcgacgtccaggccgccgccgcccgcgccgccgccatggagcccccccagccgccgccgtcgtcgctcaccgtgcaggccgactccgccgccgccgcattcctgacgcccaagaacggcggtgtcagcggcgccggcgcggcggacgacgagctcgaggcgatcgtcgagctgccgcggctcgacgagctggacgccgccgagctcgtgttcggcgccgcgttccaggacacggcggcggaacacccgtggtgcgaccccgtctggatcgacggcggctacgcggcggccgcggcggcggcggcggcggccgcggcgcacgacgacctgttcggcctcgacgccgaccaccatggatgggcccagtcggttggtgccctcttatggaacctgtga
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| Protein seq | MPELEVCSPASSGGASPPESPVEGRRGGGGGEKRGRSGDGGRHPSYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPDMAASLPRAASASPCDVQAAAARAAAMEPPQPPPSSLTVQADSAAAAFLTPKNGGVSGAGAADDELEAIVELPRLDELDAAELVFGAAFQDTAAEHPWCDPVWIDGGYAAAAAAAAAAAAHDDLFGLDADHHGWAQSVGALLWNL |
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| Function | Dehydration-responsive element-binding protein 3 [UniProtKB/Swiss-Prot:Q9LYD3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0009690 | OsNaBo_02g0009690.01 | Chr02 | 7402331 | 7403408 | + | NAM | ||
| CDS seq | atgccggagctggaggtgtgtagccctgcgtcgtcgggtggggcgtcgccgccggagtcgccggtggaggggaggaggggaggaggaggaggggagaagagggggagatcaggggatggcgggaggcacccgtcgtaccgcggcgtgcggatgcgggcgtgggggaagtgggtgtcggagatcagggagccccggaagaagtcgcgcatctggctcggcacgttcccgacgccggagatggccgcgcgcgcccacgacgccgccgcactcgtcgtcaagggccccgccgccgtcctcaacttcccggacatggccgcctcgctcccgcgcgcggcctccgcctccccgtgcgacgtccaggccgccgccgcccgcgccgccgccatggagcccccccagccgccgccgtcgtcgctcaccgtgcaggccgactccgccgccgccgcattcctgacgcccaagaacggcggtgtcagcggcgccggcgcggcggacgacgagctcgaggcgatcgtcgagctgccgcggctcgacgagctggacgccgccgagctcgtgttcggcgccgcgttccaggacacggcggcggaacacccgtggtgcgaccccgtctggatcgacggcggctacgcggcggccgcggcggcggcggcggcggccgcggcgcacgacgacctgttcggcctcgacgccgaccaccatggatgggcccagtcggttggtgccctcttatggaacctgtga
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| Protein seq | MPELEVCSPASSGGASPPESPVEGRRGGGGGEKRGRSGDGGRHPSYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPDMAASLPRAASASPCDVQAAAARAAAMEPPQPPPSSLTVQADSAAAAFLTPKNGGVSGAGAADDELEAIVELPRLDELDAAELVFGAAFQDTAAEHPWCDPVWIDGGYAAAAAAAAAAAAHDDLFGLDADHHGWAQSVGALLWNL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 17.327295 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0231000 | RBH | 0.772607 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g13710 | RBH | 0.138046 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0231000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009780 | RBH | 0.0 | 8.501273 | 0.950097 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009850 | RBH | 0.0 | 6.742017 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0009730 | RBH | 0.0 | 13.044825 | 0.557179 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0009580 | RBH | 0.0 | 0.351021 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0009720 | RBH | 0.125832 | 2.134631 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0123600 | RBH | 4.1816275 | 41.5943835 | 0.053566 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0027130 | SBH | 0.0 | 0.0 | 0.094586 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0126600 | RBH | 4.6854585 | 0.8209225 | 0.1383565 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009970 | RBH | 0.076214 | 0.243926 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0009650 | RBH | 0.0 | 17.282848 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009960 | RBH | 0.0 | 11.628438 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0009980 | RBH | 0.669361 | 1.496540 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0009670 | RBH | 0.0 | 3.553291 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G009870 | RBH | 0.0 | 0.811411 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0019210 | RBH | 0.0 | 2.216065 | 0.0 |
