Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_02g0009580 OGI:02021740 | 15/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr02:7245174-7246371
Gene Symbol ERF38, OsERF#038, OsERF038, OsERF38, AP2/EREBP#082, AP2/EREBP82, OsDREB4-1
DNA seq

CCGCCCACTACTACTAAAACGGGCAACTCATCCACCTCCTCGACGCAGCCTCACTCCTCCTCCATTGCTACCTCAAGCTCCAGCTCGAGCTCGAGGCTTTGCTTTGGCCGCAATGCCGGAGCTGGAGGTGTGTAGCCCTGCGTCGTCGGGTGGGGCGTCGCCGCCGGAGTCGCCGGTGGAGGGGAGGAGGGGAGGAGGAGGAGGGGAGAAGAGGGGGAGATCAGGGGATGGCGGGAGGCACCCGTCGTACCGCGGCGTGCGGATGCGGGCGTGGGGGAAGTGGGTGTCGGAGATCAGGGAGCCCCGGAAGAAGTCGCGCATCTGGCTCGGCACGTTCCCGACGCCGGAGATGGCCGCGCGCGCCCACGACGCCGCCGCACTCGTCGTCAAGGGCCCCGCCGCCGTCCTCAACTTCCCGGACATGGCCGCCTCGCTCCCGCGCCCGGCCTCCGCCTCCCCGCGCGACGTCCAGGCCGCCGCCGCCCGCGCCGCCGCCATGGAGCCCCCCCAGCCGCCGCCGTCGTCGCTCACCGTGCAGGCCGACTCCGCCGCCGCCGCATTCCTGACGCCCAAGAACGGCGGTGTCAGCGGCGCCGGCGCGGCGGACGACGAGCTCGAGGCGATCGTCGAGCTGCCGCGGCTCGACGAGCTGGACGCCGCCGAGCTCGTGTTCGGCGCCGCGTTCCAGGACACGGCGGCGGAACACCCGTGGTGCGACCCCGTCTGGATCGACGGCGGCTACGCGGCGGCCGCCGCGGCGGCGGCGGCGGCCGCGGCGCACGACGACCTGTTCGGCCTCGACGCCGACCACCATGGATGGGCCCAGTCGGTTGGTGCCCTCTTATGGAACCTGTGATTCGATCATAATAATAATTAATCTCTAATTAATTACCAAGTAATTAACAGCTCTAGCTTCTTTAATTTTAATCTCTCCTTTTTTTTCCAGCTTCCTAAATCTGTACATAGGTTTCCAGTTTTTTTTCTTCTTTTTTTAATCTTTTTTCAGGCAGGCTTAATATATATTTCTGCTTGATTTTTTCCCCTTTCGTTTCAAGTGTCCTGTAGCTTTGCCTTTTTGTTCAGTTTGGGGCTCTTGTCTTCTGAATTTGTCTTCCCTCTTGCCTAGTGGCTCTACCTGCAGAGTGTCAACTAAGCTAAGTCATTAATGACTTAATTATGTATAATAAAAATCTTTACA

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CDS seq

ATGCCGGAGCTGGAGGTGTGTAGCCCTGCGTCGTCGGGTGGGGCGTCGCCGCCGGAGTCGCCGGTGGAGGGGAGGAGGGGAGGAGGAGGAGGGGAGAAGAGGGGGAGATCAGGGGATGGCGGGAGGCACCCGTCGTACCGCGGCGTGCGGATGCGGGCGTGGGGGAAGTGGGTGTCGGAGATCAGGGAGCCCCGGAAGAAGTCGCGCATCTGGCTCGGCACGTTCCCGACGCCGGAGATGGCCGCGCGCGCCCACGACGCCGCCGCACTCGTCGTCAAGGGCCCCGCCGCCGTCCTCAACTTCCCGGACATGGCCGCCTCGCTCCCGCGCCCGGCCTCCGCCTCCCCGCGCGACGTCCAGGCCGCCGCCGCCCGCGCCGCCGCCATGGAGCCCCCCCAGCCGCCGCCGTCGTCGCTCACCGTGCAGGCCGACTCCGCCGCCGCCGCATTCCTGACGCCCAAGAACGGCGGTGTCAGCGGCGCCGGCGCGGCGGACGACGAGCTCGAGGCGATCGTCGAGCTGCCGCGGCTCGACGAGCTGGACGCCGCCGAGCTCGTGTTCGGCGCCGCGTTCCAGGACACGGCGGCGGAACACCCGTGGTGCGACCCCGTCTGGATCGACGGCGGCTACGCGGCGGCCGCCGCGGCGGCGGCGGCGGCCGCGGCGCACGACGACCTGTTCGGCCTCGACGCCGACCACCATGGATGGGCCCAGTCGGTTGGTGCCCTCTTATGGAACCTGTGA

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Protein seq

MPELEVCSPASSGGASPPESPVEGRRGGGGGEKRGRSGDGGRHPSYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPDMAASLPRPASASPRDVQAAAARAAAMEPPQPPPSSLTVQADSAAAAFLTPKNGGVSGAGAADDELEAIVELPRLDELDAAELVFGAAFQDTAAEHPWCDPVWIDGGYAAAAAAAAAAAAHDDLFGLDADHHGWAQSVGALLWNL

Function Dehydration-responsive element-binding protein 3 [UniProtKB/Swiss-Prot:Q9LYD3]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_02g0009580 OsARC_02g0009580.01 Chr02 7245174 7246371 + NAM
CDS seq

ATGCCGGAGCTGGAGGTGTGTAGCCCTGCGTCGTCGGGTGGGGCGTCGCCGCCGGAGTCGCCGGTGGAGGGGAGGAGGGGAGGAGGAGGAGGGGAGAAGAGGGGGAGATCAGGGGATGGCGGGAGGCACCCGTCGTACCGCGGCGTGCGGATGCGGGCGTGGGGGAAGTGGGTGTCGGAGATCAGGGAGCCCCGGAAGAAGTCGCGCATCTGGCTCGGCACGTTCCCGACGCCGGAGATGGCCGCGCGCGCCCACGACGCCGCCGCACTCGTCGTCAAGGGCCCCGCCGCCGTCCTCAACTTCCCGGACATGGCCGCCTCGCTCCCGCGCCCGGCCTCCGCCTCCCCGCGCGACGTCCAGGCCGCCGCCGCCCGCGCCGCCGCCATGGAGCCCCCCCAGCCGCCGCCGTCGTCGCTCACCGTGCAGGCCGACTCCGCCGCCGCCGCATTCCTGACGCCCAAGAACGGCGGTGTCAGCGGCGCCGGCGCGGCGGACGACGAGCTCGAGGCGATCGTCGAGCTGCCGCGGCTCGACGAGCTGGACGCCGCCGAGCTCGTGTTCGGCGCCGCGTTCCAGGACACGGCGGCGGAACACCCGTGGTGCGACCCCGTCTGGATCGACGGCGGCTACGCGGCGGCCGCCGCGGCGGCGGCGGCGGCCGCGGCGCACGACGACCTGTTCGGCCTCGACGCCGACCACCATGGATGGGCCCAGTCGGTTGGTGCCCTCTTATGGAACCTGTGA

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Protein seq

MPELEVCSPASSGGASPPESPVEGRRGGGGGEKRGRSGDGGRHPSYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPDMAASLPRPASASPRDVQAAAARAAAMEPPQPPPSSLTVQADSAAAAFLTPKNGGVSGAGAADDELEAIVELPRLDELDAAELVFGAAFQDTAAEHPWCDPVWIDGGYAAAAAAAAAAAAHDDLFGLDADHHGWAQSVGALLWNL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.351021 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0231000 RBH 0.772607 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g13710 RBH 0.138046 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os02g0231000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0009780 RBH 0.0 8.501273 0.950097
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0009850 RBH 0.0 6.742017 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0009730 RBH 0.0 13.044825 0.557179
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0019050 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0009720 RBH 0.125832 2.134631 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0123600 RBH 4.1816275 41.5943835 0.053566
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0027130 SBH 0.0 0.0 0.094586
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0126600 RBH 4.6854585 0.8209225 0.1383565
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0009970 RBH 0.076214 0.243926 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0009650 RBH 0.0 17.282848 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0009960 RBH 0.0 11.628438 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0009980 RBH 0.669361 1.496540 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0009670 RBH 0.0 3.553291 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G009870 RBH 0.0 0.811411 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0009690 RBH 0.0 17.327295 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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