Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0008170 | OGI:02017570 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:5878106-5879002 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgtataggttggataaaagaatatacgaagaacgtcaggaaacaaaattattcaacgacatgatccaaaaggtacccaagtacttgttcgaggtcggccatggcctggaggactccggcaagccgttcatctgggtggtgaaggtgacggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaggcgcgcgtggcggggcgcggcgtcgtggtccgcgggtgggcgccgcagctcgccatcctgtcgcaccgcgccgtaGgtggcttcgtcacccattgtggctgtaactcgattctggaGgacatCAcccatggcgtgccggtcgtaacgtggccgcacatctccgaccagttcctaaacgagcggctcgccgtcgacgtgccggtcggcgccacggcgtgcatgatgctgtactatatttccaattattactactatattgtggttgtatattggacattgtttgtttctttaacttcgacggatgtgaatttcataaattttgagtggcttattcttattttcaacaattttgctagttaactaattaattagtgatatatgccacataaTttttaatttttaaaatagcttaaatttctgggttgtttcaagttacaagtagcactataggattttacttattttgggacaaaatttagatcgagaactgcacttaTtttacgattgatatatcataagacataaaatcgatcttgaatatcacaatttaaccatttatttattttataaattattatcaacaacAacaaactttagatcatatgaaactcaatagttgtttttgctaccaaaccgctataggaagcacgactgcctgtggtaactgttgttaagatAaacccttatctctactggtactag
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| CDS seq | atgtataggttggataaaagaatatacgaagaacgtcaggaaacaaaattattcaacgacatgatccaaaaggtacccaagtacttgttcgaggtcggccatggcctggaggactccggcaagccgttcatctgggtggtgaaggtgacggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaggcgcgcgtggcggggcgcggcgtcgtggtccgcgggtgggcgccgcagctcgccatcctgtcgcaccgcgccgtaGgtggcttcgtcacccattgtggctgtaactcgattctggaGgacatCAcccatggcgtgccggtcgtaacgtggccgcacatctccgaccagttcctaaacgagcggctcgccgtcgacgtgccggtcggcgccacggcgtgcatgatgctgtactatatttccaattattactactatattgtggaagcacgactgcctgtggtaactgttgttaagatAaacccttatctctactggtactag
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| Protein seq | MYRLDKRIYEERQETKLFNDMIQKVPKYLFEVGHGLEDSGKPFIWVVKVTEVATPEVQEWLSALEARVAGRGVVVRGWAPQLAILSHRAVGGFVTHCGCNSILEDITHGVPVVTWPHISDQFLNERLAVDVPVGATACMMLYYISNYYYYIVEARLPVVTVVKINPYLYWY |
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| Function | UDP-glycosyltransferase 73D1 [UniProtKB/Swiss-Prot:Q9SCP6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0008170 | OsNaBo_02g0008170.01 | Chr02 | 5878106 | 5879002 | + | NAM | ||
| CDS seq | atgtataggttggataaaagaatatacgaagaacgtcaggaaacaaaattattcaacgacatgatccaaaaggtacccaagtacttgttcgaggtcggccatggcctggaggactccggcaagccgttcatctgggtggtgaaggtgacggaggtggccacgccggaggtgcaagaatggctgtccgcgctggaggcgcgcgtggcggggcgcggcgtcgtggtccgcgggtgggcgccgcagctcgccatcctgtcgcaccgcgccgtaGgtggcttcgtcacccattgtggctgtaactcgattctggaGgacatCAcccatggcgtgccggtcgtaacgtggccgcacatctccgaccagttcctaaacgagcggctcgccgtcgacgtgccggtcggcgccacggcgtgcatgatgctgtactatatttccaattattactactatattgtggaagcacgactgcctgtggtaactgttgttaagatAaacccttatctctactggtactag
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| Protein seq | MYRLDKRIYEERQETKLFNDMIQKVPKYLFEVGHGLEDSGKPFIWVVKVTEVATPEVQEWLSALEARVAGRGVVVRGWAPQLAILSHRAVGGFVTHCGCNSILEDITHGVPVVTWPHISDQFLNERLAVDVPVGATACMMLYYISNYYYYIVEARLPVVTVVKINPYLYWY |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0206700 | SBH | 0.959043 | 1.701500 | 7.476883 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11670 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0206700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008150 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008260 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008050 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008000 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008060 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0100400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0007990 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0104100 | RBH | 0 | 0 | 0.100756 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008410 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008030 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008310 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008310 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008060 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008170 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0021150 | SBH | 0.303831 | 0.0 | 1.510420 |
