Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0026060 | OGI:01079630 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:26430145-26433977 | ||||||||
| Gene Symbol | SDRLP-4 | ||||||||||
| DNA seq | atggaggcctccttgggcgcgttgatatttccgtgttttcttctgctgatatgcgcgcgggcagacgacaccgtctcccggaatcggccgctctccggcggccaaaggcttatctcgtccggcggacttttcgcgctggggttcttccagcctggtacgtggatatacatgagctaataattcagccctatcatccacttcaaaaacttcagcctatttcgtttgtattttttatagcaactactgtagcaagtaacaagtgatatagagattagagacatattgtaaacttcagctattagtttatcttgcctctgctttatattccaattctcatcgggtttcattaagtacaaaaggtttcagaaagctttcacccacatttctgcatgtttcgtcatagttctatgcttcttccagtccttcaagaaaccttttttccccggaaatacctaaattttatatGtataattgcagtaaggacaatatggtttgatcaaaaaccaaaacaaaaaataaaacgaggtacatatagttttgttaggcgtatgcatgtttcagtgagtcttaatttaaatagttcaatcaatttctatgcatgttttggctatatgcctatatatcctggatgtagaggctagattgacttctactatcgaaaaaatgttttatgcaagttccgtacaagatttcatggggtaatgttttataggggatacaagatgggatatcgtaaggatgatattccattctgtcgttagcatatatcttgtataatgttttacagacttaacacgattaatatgttttttttttcaaaagtactgttcatggcaattttatagttttacagtgtgccatccttgtattgcaatagtaattacaaaccaaattgatgttttgaacatgttatgtgcaaagcttattgcaccccaagatagtacaatactccctccgtcccaaaatataaatgattttggagggatgtgacactatctagtattacgatattgtgttacatcccttcAaaaccctatgtctagatttgtagtactatgttgtattacatcccttcaaaatcccttatattatgggatgaaggaaataTtttatattgatataatagAaaaagaatagtataaaactatagccttGGggggctataattaggggaaaaaaagaaactacaagccacgccacatgtttccttttattttacttgatactttcaggttggaggtgaatatctggctagtgccctagtaggcatatttttgtgagaaagaaataggtgagttcttgaaatccacaaggaaggcttccgaaatatgctcgtttcatggcataattcttttccttctttttgttactttcccaCAAGctttaaattttaacttatatgaaagatggaaatataagagagaaaatattataatttgtagaagaagatatttccatgtacaacaaatgaatcatgcagcagttagcatttgttgaagatgtgaagcaagacctatcttcgttatttctttctagatacacatactagtctctaagctctagaagtctttgtctagtgcattcttgaaaactattataatctcagtggttaacaattcagatgatagagcgcctaacagatggtaccttgctatttggtacaacaagatctcaaagaccacacccgtctggatagcaaatcgggcgactccaatctctgatccaaacttatcacagttgacagcatcagaagatggcaatttggcattgttcgaccaggccaggtctttgatctgggccacaaatatcactaataacgtcaactccacagttggagttatccttgattcaggcaacttagtgttagctcctgcctccaatacctccaatttcctatggcagagttttgatgaaccgaccaatgtgtggctccctggggccaagcttggacggaacaaaattactggccaaatcacaagatttatctcatggaaaagctctgttgatccatcacctgggtattatacgcttgagattgacccgaatggtggcgaccagttcatccatctatggaacaattctgccatctactgggaaacgggcaaatggattggtaatatgtttactggaattcctgagatggcattgtatcctaaagaagttttaagctacaaatttaccgttaacaaccaagagagctactttgtgtaccgaactaatgcatccattgccacagcgatgtttattatggaaatttcaggccaggtaaaaacagtagtatggatggagagcAaaaaagactgggtgcccttcttggcactgccaaaagcacagtgcgccgtgtacttcctttgtggttcttttgccatgtgcactgagaacgccgtcactttctgcagttgtctcaggggtttcagcaagcagtacaacggcgagtggcgatatggtaatcccagtggaggttgcatgagAaacacTAAgctacaatatgatggcaatagctctagcaagacaacagctgatgaattctatgcactagctgttgctaagttgcctgacaaagcctggggtttggcaactggtacagatggatgtaagcaggcttgtctgaacaattgctcttgtaccgcttattcctacgctggtggttgttctttgtggtatggagatttaatcaatctagtggctcctgctgatggttcagtggggcatagcatccatatccggctcgctgcatcagagttctccagctaacgaggaaggcaactgttattggggcttcaactgctggagctatccttgtcaccctcattgtgatcattggcatacttctgattctcaggaagaggaatttgagtgaagcgaacaaagtggagggttcgttggtcgtattcaggtataggttcctacagcatgtgacaaaaaacttctctgagaggttgggcaaaggttcttttggtcctgtatttaagggaacgttacctgatgggacactaattgctgtaaagaaacttgatggtgtttctcagggagaaaagcagttccgagctgaagtcagcacaattggcacaattcagcatgtgaatttaatccggttgctgggattttgctcagagAGGTccatgaagatgctagtctatgagttcatgccaaatgggtcgttggatcgttacctatttggaagcactccattgactttgagctggaagacaAGatatcagattgctcttggaattgccaagggattagcttacttgcatgagaaatgcaggagcctcatcatacactgtgatatAaagccagagaatgtactcctaggtgctgatttcatgccaaagatcgcggattttggacttgccaagctcctcggaagggatttcagcagagttttgacaaccatgagaggcactatagggtatcttgccccagaatggataagcggcacagctatcaccacaaaggcagatgttttcagctatgggatgatgcttttcgagatcatatcaggaaacagaaatgcagattggcatcggcaaggtgagcaaggtgcagggacattcttcccagtgctagtggcgatgagactccctgaagggaagattcaagacttgctaggttcagaactaagtgcagatgctaacttagaagaggtggagagggcttgcaaggtggcttgctggtgcatacaagatgatgagaacacaagaccaacgatgggagagattgtccagattctagaaggattggtcgatgtcagctttcctcctgtccTttggtatctacatgttcttgcccagcgctccaacttctccaccgaggaaacgtcacattag
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| CDS seq | atggaggcctccttgggcgcgttgatatttccgtgttttcttctgctgatatgcgcgcgggcagacgacaccgtctcccggaatcggccgctctccggcggccaaaggcttatctcgtccggcggacttttcgcgctggggttcttccagcctgatgatagagcgcctaacagatggtaccttgctatttggtacaacaagatctcaaagaccacacccgtctggatagcaaatcgggcgactccaatctctgatccaaacttatcacagttgacagcatcagaagatggcaatttggcattgttcgaccaggccaggtctttgatctgggccacaaatatcactaataacgtcaactccacagttggagttatccttgattcaggcaacttagtgttagctcctgcctccaatacctccaatttcctatggcagagttttgatgaaccgaccaatgtgtggctccctggggccaagcttggacggaacaaaattactggccaaatcacaagatttatctcatggaaaagctctgttgatccatcacctgggtattatacgcttgagattgacccgaatggtggcgaccagttcatccatctatggaacaattctgccatctactgggaaacgggcaaatggattggtaatatgtttactggaattcctgagatggcattgtatcctaaagaagttttaagctacaaatttaccgttaacaaccaagagagctactttgtgtaccgaactaatgcatccattgccacagcgatgtttattatggaaatttcaggccaggtaaaaacagtagtatggatggagagcAaaaaagactgggtgcccttcttggcactgccaaaagcacagtgcgccgtgtacttcctttgtggttcttttgccatgtgcactgagaacgccgtcactttctgcagttgtctcaggggtttcagcaagcagtacaacggcgagtggcgatatggtaatcccagtggaggttgcatgagAaacacTAAgctacaatatgatggcaatagctctagcaagacaacagctgatgaattctatgcactagctgttgctaagttgcctgacaaagcctggggtttggcaactggtacagatggatgtaagcaggcttgtctgaacaattgctcttgtaccgcttattcctacgctggtggttgttctttgtggtatggagatttaatcaatctagtggctcctgctgatggttcacatccatatccggctcgctgcatcagagttctccagctaacgaggaaggcaactgttattggggcttcaactgctggagctatccttgtcaccctcattgtgatcattggcatacttctgattctcaggaagaggaatttgagtgaagcgaacaaagtggagggttcgttggtcgtattcaggtataggttcctacagcatgtgacaaaaaacttctctgagaggttgggcaaaggttcttttggtcctgtatttaagggaacgttacctgatgggacactaattgctgtaaagaaacttgatggtgtttctcagggagaaaagcagttccgagctgaagtcagcacaattggcacaattcagcatgtgaatttaatccggttgctgggattttgctcagagAGGTccatgaagatgctagtctatgagttcatgccaaatgggtcgttggatcatgttttcagctatgggatgatgcttttcgagatcatatcaggaaacagaaatgcagattggcatcggcaaggtgagcaaggtgcagggacattcttcccagtgctagtggcgatgagactccctgaagggaagattcaagacttgctaggttcagaactaagtgcagatgctaacttagaagaggtggagagggcttgcaaggtggcttgctggtgcatacaagatgatgagaacacaagaccaacgatgggagagattgtccagattctagaaggattggtcgatgtcagctttcctcctgtccTttggtatctacatgttcttgcccagcgctccaacttctccaccgaggaaacgtcacattag
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| Protein seq | MEASLGALIFPCFLLLICARADDTVSRNRPLSGGQRLISSGGLFALGFFQPDDRAPNRWYLAIWYNKISKTTPVWIANRATPISDPNLSQLTASEDGNLALFDQARSLIWATNITNNVNSTVGVILDSGNLVLAPASNTSNFLWQSFDEPTNVWLPGAKLGRNKITGQITRFISWKSSVDPSPGYYTLEIDPNGGDQFIHLWNNSAIYWETGKWIGNMFTGIPEMALYPKEVLSYKFTVNNQESYFVYRTNASIATAMFIMEISGQVKTVVWMESKKDWVPFLALPKAQCAVYFLCGSFAMCTENAVTFCSCLRGFSKQYNGEWRYGNPSGGCMRNTKLQYDGNSSSKTTADEFYALAVAKLPDKAWGLATGTDGCKQACLNNCSCTAYSYAGGCSLWYGDLINLVAPADGSHPYPARCIRVLQLTRKATVIGASTAGAILVTLIVIIGILLILRKRNLSEANKVEGSLVVFRYRFLQHVTKNFSERLGKGSFGPVFKGTLPDGTLIAVKKLDGVSQGEKQFRAEVSTIGTIQHVNLIRLLGFCSERSMKMLVYEFMPNGSLDHVFSYGMMLFEIISGNRNADWHRQGEQGAGTFFPVLVAMRLPEGKIQDLLGSELSADANLEEVERACKVACWCIQDDENTRPTMGEIVQILEGLVDVSFPPVLWYLHVLAQRSNFSTEETSH |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0026060 | OsNaBo_01g0026060.01 | Chr01 | 26430145 | 26433977 | + | NAM | ||
| CDS seq | atggaggcctccttgggcgcgttgatatttccgtgttttcttctgctgatatgcgcgcgggcagacgacaccgtctcccggaatcggccgctctccggcggccaaaggcttatctcgtccggcggacttttcgcgctggggttcttccagcctgatgatagagcgcctaacagatggtaccttgctatttggtacaacaagatctcaaagaccacacccgtctggatagcaaatcgggcgactccaatctctgatccaaacttatcacagttgacagcatcagaagatggcaatttggcattgttcgaccaggccaggtctttgatctgggccacaaatatcactaataacgtcaactccacagttggagttatccttgattcaggcaacttagtgttagctcctgcctccaatacctccaatttcctatggcagagttttgatgaaccgaccaatgtgtggctccctggggccaagcttggacggaacaaaattactggccaaatcacaagatttatctcatggaaaagctctgttgatccatcacctgggtattatacgcttgagattgacccgaatggtggcgaccagttcatccatctatggaacaattctgccatctactgggaaacgggcaaatggattggtaatatgtttactggaattcctgagatggcattgtatcctaaagaagttttaagctacaaatttaccgttaacaaccaagagagctactttgtgtaccgaactaatgcatccattgccacagcgatgtttattatggaaatttcaggccaggtaaaaacagtagtatggatggagagcAaaaaagactgggtgcccttcttggcactgccaaaagcacagtgcgccgtgtacttcctttgtggttcttttgccatgtgcactgagaacgccgtcactttctgcagttgtctcaggggtttcagcaagcagtacaacggcgagtggcgatatggtaatcccagtggaggttgcatgagAaacacTAAgctacaatatgatggcaatagctctagcaagacaacagctgatgaattctatgcactagctgttgctaagttgcctgacaaagcctggggtttggcaactggtacagatggatgtaagcaggcttgtctgaacaattgctcttgtaccgcttattcctacgctggtggttgttctttgtggtatggagatttaatcaatctagtggctcctgctgatggttcacatccatatccggctcgctgcatcagagttctccagctaacgaggaaggcaactgttattggggcttcaactgctggagctatccttgtcaccctcattgtgatcattggcatacttctgattctcaggaagaggaatttgagtgaagcgaacaaagtggagggttcgttggtcgtattcaggtataggttcctacagcatgtgacaaaaaacttctctgagaggttgggcaaaggttcttttggtcctgtatttaagggaacgttacctgatgggacactaattgctgtaaagaaacttgatggtgtttctcagggagaaaagcagttccgagctgaagtcagcacaattggcacaattcagcatgtgaatttaatccggttgctgggattttgctcagagAGGTccatgaagatgctagtctatgagttcatgccaaatgggtcgttggatcatgttttcagctatgggatgatgcttttcgagatcatatcaggaaacagaaatgcagattggcatcggcaaggtgagcaaggtgcagggacattcttcccagtgctagtggcgatgagactccctgaagggaagattcaagacttgctaggttcagaactaagtgcagatgctaacttagaagaggtggagagggcttgcaaggtggcttgctggtgcatacaagatgatgagaacacaagaccaacgatgggagagattgtccagattctagaaggattggtcgatgtcagctttcctcctgtccTttggtatctacatgttcttgcccagcgctccaacttctccaccgaggaaacgtcacattag
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| Protein seq | MEASLGALIFPCFLLLICARADDTVSRNRPLSGGQRLISSGGLFALGFFQPDDRAPNRWYLAIWYNKISKTTPVWIANRATPISDPNLSQLTASEDGNLALFDQARSLIWATNITNNVNSTVGVILDSGNLVLAPASNTSNFLWQSFDEPTNVWLPGAKLGRNKITGQITRFISWKSSVDPSPGYYTLEIDPNGGDQFIHLWNNSAIYWETGKWIGNMFTGIPEMALYPKEVLSYKFTVNNQESYFVYRTNASIATAMFIMEISGQVKTVVWMESKKDWVPFLALPKAQCAVYFLCGSFAMCTENAVTFCSCLRGFSKQYNGEWRYGNPSGGCMRNTKLQYDGNSSSKTTADEFYALAVAKLPDKAWGLATGTDGCKQACLNNCSCTAYSYAGGCSLWYGDLINLVAPADGSHPYPARCIRVLQLTRKATVIGASTAGAILVTLIVIIGILLILRKRNLSEANKVEGSLVVFRYRFLQHVTKNFSERLGKGSFGPVFKGTLPDGTLIAVKKLDGVSQGEKQFRAEVSTIGTIQHVNLIRLLGFCSERSMKMLVYEFMPNGSLDHVFSYGMMLFEIISGNRNADWHRQGEQGAGTFFPVLVAMRLPEGKIQDLLGSELSADANLEEVERACKVACWCIQDDENTRPTMGEIVQILEGLVDVSFPPVLWYLHVLAQRSNFSTEETSH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.577317 | 1.920816 | 0.337810 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0642801 | RBH | 0.770379 | 0.000000 | 1.170033 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g45520 | RBH | 0.352248 | 0.000000 | 0.084022 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0642801 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0026960 | RBH | 0.352319 | 0.000000 | 1.453171 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0026460 | RBH | 0.0 | 0.000000 | 0.241739 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0026880 | RBH | 0.177132 | 0.0 | 1.770695 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0026140 | RBH | 0.000000 | 0.021038 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0025910 | RBH | 0.0 | 1.765458 | 1.998078 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0434800 | RBH | 0.567015 | 2.767213 | 1.769732 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025550 | RBH | 0.020097 | 0.0 | 0.129188 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0423900 | RBH | 0.413796 | 2.588327 | 4.4432795 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0025830 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0025750 | RBH | 0.0 | 2.597963 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0026080 | RBH | 3.772445 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0026110 | RBH | 0.000000 | 0.000000 | 0.345423 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0025940 | RBH | 0.0 | 0.673792 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G026300 | RBH | 0.000000 | 0.000000 | 0.337398 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
