Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0023450 | OGI:01013090 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:24297860-24298169 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctgttgcacgtctgcccgccagcgaggttgcgcagcctacgcctcggcggcttccagctcgccctcgccttcagggagctctgcaacggcatcgcggaggtaaacccatcaatcaatggtggtagttggctcaactcaaaacaaagaaagaagcaaatcatctttttaattgtgaaatggtatgcaggcgaaggtggagatagtggttagggaggggaaggtcggggagacggtggtGgtgacggtgaaccagctcgccgccaccacgctcgtcgtcggtctccacgacaagattcctcaactgaactga |
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| CDS seq | ctgttgcacgtctgcccgccagcgaggttgcgcagcctacgcctcggcggcttccagctcgccctcgccttcagggagctctgcaacggcatcgcggaggcgaaggtggagatagtggttagggaggggaaggtcggggagacggtggtGgtgacggtgaaccagctcgccgccaccacgctcgtcgtcggtctccacgacaagattcctcaactgaactga |
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| Protein seq | LLHVCPPARLRSLRLGGFQLALAFRELCNGIAEAKVEIVVREGKVGETVVVTVNQLAATTLVVGLHDKIPQLN |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0023450 | OsNaBo_01g0023450.01 | Chr01 | 24297860 | 24298169 | + | NAM | ||
| CDS seq | ctgttgcacgtctgcccgccagcgaggttgcgcagcctacgcctcggcggcttccagctcgccctcgccttcagggagctctgcaacggcatcgcggaggcgaaggtggagatagtggttagggaggggaaggtcggggagacggtggtGgtgacggtgaaccagctcgccgccaccacgctcgtcgtcggtctccacgacaagattcctcaactgaactga
More
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| Protein seq | LLHVCPPARLRSLRLGGFQLALAFRELCNGIAEAKVEIVVREGKVGETVVVTVNQLAATTLVVGLHDKIPQLN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0000880 | SBH | 0.336359 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0000870 | SBH | 0.0 | 0.0 | 1.289999 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0000870 | SBH | 0.0 | 12.969554 | 0.942402 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0000880 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023440 | SBH | 2.775532 | 0.472948 | 3.969628 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0397500 | RBH | 0.3554735 | 2.771577 | 2.6430535 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0000850 | SBH | 0.0 | 0.0 | 0.138043 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0386800 | RBH | 0.7522105 | 11.6939885 | 8.020536 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023380 | SBH | 0.048732 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023340 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023600 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0000870 | SBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023510 | SBH | 0.042830 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G000860 | SBH | 0.0 | 1.529297 | 1.343564 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0000820 | RBH | 0.0 | 14.992640 | 0.000000 |
