Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0001250 | OGI:01002250 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:900222-910264 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tgtactttgggattgctccaaaagcacgctgctatcatgagttcatgacaagcacagcataaactcccagtaaatttcattatagttacattcatgaccttctccctgtgccttcaatcttcaacagcactacagaaacatggctaaacttcttgttgtagtgctgctactatctcttctcatctatgcggccacagcatggGATgctgagggcttcttcaacttcaagagttgtccaccacatcagtgcagcaaacatggaccaaaagtccggttcccactccgccttgcgtcacaatctccgtcatgcggcacacctctcatggagttatcatgttctggacaggacaccatcctgtatcacccagttctaggctcctgcaaggtgactgcaatatcttacaagcatgctgccatgaccatcatcccgcttgtagattccacacctcactgcccacttcagaagctcatctctacaaatttatcaactgatgtgtacaaacctcaaacattggaagctgcaagcttagtaagttgttcaagagatttaccaagagatcagcacagtgtagttggcccaataacttgcctcagtaacaacacaagccagtggtatttgatacatccTtatgcatccatgtctgttcttcagtcagactgcaaagttgttagtaaaggcatccaGgcaccctcaacttttaaggaaacagaaaatggAgtaatcggtgttgatgagttggtattcacttggtactccagtgacataaccagagattgtcaaaaatgtgaaaatgaaggcaaacactgtggtttcagctcacaaaggggccgagcattctgctattatggtattttctctttctgaagcagaaatgttacatcaatattatgacttgcTttgccttggtagggaactctatggtcTttaccTtttcattctcttagTTtaaagtttgctaattaaattgttcaaaagatttccatagttgaattagttgtaaacactgcagatcagagcagctgCtagccagaggaagcataccaaagctctaggTtcacatgtatggttattctaatttaaaatgcgcgcacgtgcgcgcacacaagagaaggttataaccaattaagactaacgtaattttttttAaaattcttaaaattaaaaaaaaaataccattcatctacaaggtaacctagatcaaaaTGtggagcataggcctcccttagtaaccAaagagggtgctatgaatgaatacactctccaaaataccAttgTtagtatcaacgtatagtttatttgattgtaaccatttggactggaccacctatagaTgttctgtcaTgttccaagttaaAGaaaaaaagaaagaagaaaacataaTttacttagcaacaactgctaagcctcgcattggttccatgcattccagccatagaaaccacatccgcattccttaatgtcaatactacaCTctctactctagcttatcactagaaccaaggatggaCattggttaaagggtggtccaaactgaaacatcggtaataaaatgttgCccaaagtgaaatttaccccttttttttaccagtagtatatccatttttcgAaaccagaaagaaCcgtatactgttataactgagatcacgtatgcatgaacctaacaggaatgcatatctattttccagacaagttatgaTCctttttggaaaagaataTtttttgagtttatacatatatagctctttgttctatgttgtccttcacctgttaagcttCctagtaggatggaactCctacagaaagtgtttttcTagcaaagtcttatggaTggttgtcctatagaattcaacagacatggcaCcatAttcctaCatttatctattcctgtggTttttaattagtataccatcTtccaaaaaaaggcccttaaaagaacgtttctggaTtttttttttaaaaaaaaCatgttactttataTttgaggtccatggtaaattaagatggcaggaacaatgtcatttcataaccaggtccatttctaattcTgctctttcttaaTtgcaggttcatatgtcataatcaTCataggTAAtactacgattaaataTttctattatggatataaaattctagTtgctatcaaattcttgtatctgcttataccaataagatggattatgtgatttgtttttGTCtggaTgcagcttgacaagttctttttTGgtttctagcaacgtcatctgcagccatcattgtagTtcttttgcttatAGTgcccattgcaCTctgtcTtttcctgaagtcgcagtataacgaagaggtacatttgaaggttgaaatgttcttgaaaacatatggaaCATcaaaacccaaaagaTatactttttctgaagttaggaagatttcaagacggttcaaacataagttaggctagggtggttttggaagtatatacaagggtgagctaccaaatggagtacctgtggcagttaagatgctagaaaattctataggagatgggcatgAATTCatCaatGaaGttgcaaccattgggacaatccaccatgccaatgtgctCcgccttttgggtttttgttcagaaggaacaagaCgtgctttaatttatgaattcatgCctaatgactcattggagaaATatatattctcacaaggttctaatgtgtcaagggactacctaGtacctgaaaaaatggtagatgtcgctttaggcattgcaagaggaaTggagtacctacatcaaggatgcaatcagcgcattctccatttcgatatcaagcctcacaATatattactagattacagatttaacccaaagattgcAgaTtttgggcttgcaaagcTGtgtgcaagggatcaaagcattgtcacgttgactgcagcaagaggcacaatgggctacattgcaCcagaatTAtaTtctcggaactttggagccaTatcatacaagtcagatgtttatagtttcggcatacTggTtttagaaatggtgagtggaagaaggaaCctggagccaagtattgagacccaacatgaggtttatttCcccgagtggatttatgaaaaagtatttactgggcaacagttaacagttggtatggaaatgaCacaggtagaaaaagatagagtgagacaactggcaattgtggcactatggtgcattcagtggaacccgagaaACaggccTTcaaCgacccaggtggttaacatgctaacaggaaggttgcaggatctgcagatgcctcctaaACCcTttttctcatctgcaagcgaatcTataccgtAaaaaaaaaatgaagatatcaccatggttggcacatgtttgaaagatagcctacgtattgctcagtgatcctgagtagtacctccttccctaaatatttgacgccgTtgacTtttttaaatatgtttgaccgttcgtcttattcaaaaacttttgtgaaatatgtaaaaCtatatgtAtacataaaaaTatatttaacaatgaatcAaatggtaggaaaagaactaataattgcttaaTttttttaaataagacgaacggtcAaacataTttaaaaaagtcaacggcgtcaaatatttagggatggagggagtactagctagcatgtaccttacttgtAaaatgaatagcacatacagaattgtgctcaaagacaaggacttgataattaCcttattctgtgttctgtaatagccttgaTttatctttatcattcatattatgtagcctcaaacactggaccccttgcaggctgtacaatgcgattgagaattcctttgcatttcATtcagtgCatcAataccaggtgggatcgcataatagaagcctgtAaggcaggcgattagctatggcatgttgttccttatttgctactacaatcctaaatcgaaatcgaatctacagatgcgcatgggtctgagtttgctactacaaCcctaaactgaatctatagaatcaaaagcaaagcaaaggaattactaccttcatcgatgCccaggagaGggggacagcggggcgggcggtctcaaCccggctgcgcagcgccagcatCcgatcaattctgcgacctctcgagactctagcggctcaaatccgaTggcgagcatggcggtatagCgcTccagtggtacgcactggcggcggagcgcggagagtgcctccgacgctctacCggGtTggggggaagtagccggtggacggcgagaagggttccgaatGggctcgtttgtaaaacatggccCAaCtaccgctgaatctaaTtgggctgggactCggggtacaggccgGAgcccacgaaagaagagcatatgaaatacaaaattagttTtATTAaatttaacattgaacatattttgataatatgtttattttatgttgaaaatgctagtataTtttttttataaagTtggtcAaacttaaaagtttgactaggatAaaaataaaagcAacttaTaaggacaagttcactgtacttctttgcatgataatactaagtgcataaaactACatatacatgggcctCcgcgtaatgacgctagcgtacacagaaaaatacaatCACcacatatataagcagcttcagcaatcagcatttcgcaacgtgcatActactagtactaagTtactggtagctagagctctgaaaCaggctaaTgctttcgtcgtcatcgtcctCttcagcttcagagaTtgcagtcagatcagatgacagatggtaaggctctactccaaggggttgctcatcatcacagaagaatggcttgggaggaacttggagatcatcgctgCcaccttcaagcatctctatcacctcgcTcatcgtcggtcgatcagatgacctcatctgaaTgcaccataatccaacaacggaaagcttcttctccagctcatgcatgtcgacaatgtcagagatctcacatgtttctcgtcgagtcaactgcttgtacaCccgggatggatagtatgcctgacttgagtttgctgcattcagatctgcatttcttCctcctccggccaTttctagtagcagcatcccgaagctgtaaACatCagatttgcttgatatggtaccaaagctcCGAgagatCatcccaggagctatgtaacctatcgttcctcgtgcggcactcactggcacaaagctcttgtcccttgggtacagcttggcgagaccgaaatctgcaacttttgggacaaagttatcatcaagaagaatgttatgcggcttgatgtcaaagtgtagaatttgcatctcacacccctgatgcaggtagttgatccctcttgcaatacccaaggcgatctcattcagcttgtcccaggagaaactcttctctactgagaagaTgtacttgtcaagagagcctcgaggcatgtaatcgtatacaagtgccctcctcatttcttccgagcaaaacccgatcagacgcaccacattgacatggtggatCcttccaatggttgagacttcactgatgaactcatctccgttacagctggagctaccagtgagcatcttgacagcgatatggacattgcccgggagcaatacacctttgtaTacagagccatagcctccttgacccagcttatctctgaaatGggatgtgaccgcaatgatgtcagtgtaggcgtacctcgtcggaccaatcatctgttgcatCcggaggaacttctctaccgcgtcgatcgtgatccttgttttccagtacttgtgggcaaggaagatgAataccaccagcggcaccaacagtaacctgcatagaactttgcagacatgccaagaacccaagaagcagggttttttagatactaagatagtgacaaagtacaggacaatatcactcaaaaagaacattgcagctagccagctataatgattaagtgaaggtaattcaagcataccAaaatggagcttgatgatagcaatgacagAtactatgataaccacgaaTgacattaactttgttgtgtagacgtgatcagtagCtctgcaacttgcgaaatgtatatcgctccagaaaatagcacgggttatattccgaatgcttgcaCcagatatatggtctttgaagtacctgcagatcacacaattgtaaaggacgggttatgcgaaggggAacatatctttctatgtaaagagaattacgaggagaaaagcaaCcaagtcggtagcaaatggagccacgagatgaTtttggggcaagaCacatttgagagcagagcagactcACTtacctcattgaatcgTtgaggcattgcgtagtgcttatacccctctggccacggataatctcaaatggaaatctaacacgaaatcccttccttataaatcctacgagatctgtgtaacttgcattctctagctgagagtagtcctgaccatcaaattcaaagggaatcatgcccaagtatcgacaagagggttgaagctctccaactgcacaagtgtggaacctgttgaggtaaaagaaggaattgttggcaggcaggcaagcgaggggcctgtaccgtggcatattagcatctgctaTtattggtttggaacaattcacaaagcatgcccaaataCtgcctgaatcagtatccAattcgacaaaagAatcattggatatctcccacctaggCctaggccagtcaatgttaggagggtgaagatcagcgccaggaagagggcagctgctgctgtttgaatcatcttgcacggtggcgtcgatggccaagaaggacagatcggtgtagTTgatgCtactcacgtagtatgttcTTgtgttgataagaatggtggccttgccattgttacaggacaggtcgtaccatggacgagggccgataccacagtcgcgagtgtcgccttgaagacggaaagggtaggatatgTtgtgaaggtgaccgcaggagaaaggaggacagtagtgcaggTtgttgtcttgCcctcctCcaacatcagctgcaacaactCcaagcaaagaagtgatcagtagtagagcTttctgcagggtgtaggtaatactactactaatggagctcgccatggctgcagcttcccggatgaatggctttggttctctgcttatggagttggctgcaagtgctgatggccgtcacaggctcacagcaaccatggtgtgTTAtgcAaacgatcTtctttttgcctatatCttaacaattgaataattgcaaatgctggcgtccctccgcCGgCccagcgaaataaacaaaacaaaaagcttaggctgctgattaacgtatacttacctaatacttttgggtggctagcttccacgctttccgcctgcaggatggtcagcagttgacggacctgcaagacgatggtcagcagttgacgccTtgacggactgcagtacgtagcctagcgctttgtactatttgaacaagCcatggagacaCaccacaaggaacctttaaaagaatAaaaattcatggaggcatggagcacatacggcagtcaagtcaaattgtcaaagttggaggactgccagccggccaggcacagacacgcatatgattggtaggagtatatagtatttccgttgctcttcttcatgtccatgaggaccatgacagaaacgaatactggtcgagttaagatgagctctggacatgctcttgcggcagccgtgttgctgtttcttcttggagctcagttgaagaagcccacagcgtgggaagacaaggaTttcttcaaatcatgcccgccgTcgCggtgcagcgagcatggcccggagatcaggttCcctttccaacttgaatccaacaataatactacaccatcctcatgcggcttaccatgcatgaagctatcatgctatggccaagacaccatccTtgataacaaataccttggaaggccatacaaggtgatcgccAtagattacaggcatattaccctgacactctccccgcttgcagtcgcaggCTtggaatactCctcctgCccgcttctaaaatcggtaccaattccttctgtacagtttcctgccgcaccatttccttattatgaaaactggacctcctgcgacatatacgattgggaacctgcagcactagtaagctgttcatcagagttcaaaccagctactatccctgatgccgCagattatattgctggccccatctcttgccttagcaacacaagccacttctcctatttggtggcttatgatgtacccacatttcttattccattggActgcgaggttgtctcagatggccgcattccgataccacatttttcatccggtggtgtctacaagttcagagaaagtgcagaaagagtactcagtttttctgagacgacgatcaagtggacattcctcggaaatgccgtcgccttcaattgctcacggcagtgtgaattccaaggccgacgccgcgcattcagTtcacgaaggaatcagacattCtgcatgcgtccaggtattatttgtaacccggcaaatccctctacagcaggcaccgtcttcgtttattttctgcaagttttacaattttcagtttacaatccactaaaaagccatcaaaacAcatatgagcgccacacaCttacttcatcttaatctcaaacgtggttgctcaaaatgtagatctataaagctttaccaacctcatcataagcctctgaaTtgcattcacttatggGAgCgcatcattgattacaatttacaacaagattatgtctggcatttcttgtactggagcctggaggtgcAatatatattaaatcatgctgacagatgagctgcatcagtgcattactgcAaaggttaTttttgttttggaccatagcaaatatcaccgagatggagaataccatatatagCttatgccattaacatgtgggcatggtcatCcccgcatgtcAttctcacatgcaatggtatttctaaCcgatgcatctttatactactcaattttctgttaatatgatggtcaccTaaaaaattaagaactagaagcggaaatgaacacaaccAtaatacaactgcatgggcatggctgcaCctgcagaaagttactgaagaaacaagacttacctgctaTTttttgccgggtcggccgaaaaatcgaccaaCcgaattgtattaagaagagagAaaaaagagccaggtacatacgacattatactgcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccaaaaaaaaaaaagaaaagaaaaaaaactcctagggatcaaggaacccaggaggaaactcccacacactgacttacctgctatcacagacgtacagcagttcaaggttcgtagacaggtaattcagatggtatagaaataggtaatttggttgcttgtatgatacaactagagctgcaacgagatgctcctggattgtttacttgttttgatgggtaacgtaacaaggttaagattgatctgaggtgtgatagacagataatttccagcccctcatccgccttaccccaccctaataattcttaataccattttatcatttagcaccagcaagattcttatgatatttgttgaacatgatgtagggatcatttctcatttacaaaTatattcatgatgtttacagtttcggcatgctggtgctagaaatggttagcggaaagaggaactcagacacaagtgttgaaagccaaaatgaggtgtacttcccggagtggatctatgaacaggttaccactgggcaggatttggcacttggtagggaaatgactcaagaagagaaagcaacaatgagacagctggctattgtggcactttggtgcattcaatggaacccAaaaaataggccatcaatgacaaaggtggtgaatatgctaacagggaggttgcaaaatctacaaatgccacctaagccgtttttctcagctaacagccatcctaagctgtag
More
|
||||||||||
| CDS seq | atggctaaacttcttgttgtagtgctgctactatctcttctcatctatgcggccacagcatggGATgctgagggcttcttcaacttcaagagttgtccaccacatcagtgcagcaaacatggaccaaaagtccggttcccactccgccttgcgtcacaatctccgtcatgcggcacacctctcatggagttatcatgttctggacaggacaccatcctgtatcacccagttctaggctcctgcaaggtgactgcaatatcttacaagcatgctgccatgaccatcatcccgcttgtagattccacacctcactgcccacttcagaagctcatctctacaaatttatcaactgatgtgtacaaacctcaaacattggaagctgcaagcttatcagactgcaaagttgttagtaaaggcatccaGgcaccctcaacttttaaggaaacagaaaatggAgtaatcggtgttgatgagttggtattcacttggtactccagtgacataaccagagattgtcaaaaatgtgaaaatgaaggcaaacactgtggtttcagctcacaaaggggccgagcattctgctattatgcaacgtcatctgcagccatcattgtagTtcttttgcttatAGTgcccattgcaCTctgtcTtttcctgaagtcgcagtataacgaagagggtggttttggaagtatatacaagggtgagctaccaaatggagtacctgtggcagttaagatgctagaaaattctataggagatgggcatgAATTCatCaatGaaGttgcaaccattgggacaatccaccatgccaatgtgctCcgccttttgggtttttgttcagaaggaacaagaCgtgctttaatttatgaattcatgCctaatgactcattggagaaATatatattctcacaaggttctaatgtgtcaagggactacctaGtacctgaaaaaatggtagatgtcgctttaggcattgcaagaggaaTggagtacctacatcaaggatgcaatcagcgcattctccatttcgatatcaagcctcacaATatattactagattacagatttaacccaaagattgcAgaTtttgggcttgcaaagcTGtgtgcaagggatcaaagcattgtcacgttgactgcagcaagaggcacaatgggctacattgcaCcagaatTAtaTtctcggaactttggagccaTatcatacaagtcagatgtttatagtttcggcatacTggTtttagaaatggtgagtggaagaaggaaCctggagccaagtattgagacccaacatgaggtttatttCcccgagtggatttatgaaaaagtatttactgggcaacagttaacagttggtatggaaatgaCacaggtagaaaaagatagagtgagacaactggcaattgtggcactatggtgcattcagtggaacccgagaaACaggccTTcaaCgacccaggtggttaacatgctaacaggaaggttgcaggatctgcagatgcctcctaaACCcTttttctcatctgcaagcgaatcTataccgaccatgacagaaacgaatactggtcgagttaagatgagctctggacatgctcttgcggcagccgtgttgctgtttcttcttggagctcagttgaagaagcccacagcgtgggaagacaaggaTttcttcaaatcatgcccgccgTcgCggtgcagcgagcatggcccggagatcaggttCcctttccaacttgaatccaacaataatactacaccatcctcatgcggcttaccatgcatgaagctatcatgctatggccaagacaccatccTtgataacaaataccttggaaggccatacaaggtgatcgccAtagattacaggcatattaccctgacactctccccgcttgcagtcgcaggCTtggaatactCctcctgCccgcttctaaaatcggtaccaattccttctgtacagtttcctgccgcaccatttccttattatgaaaactggacctcctgcgacatatacgattgggaacctgcagcactagtaagctgttcatcagagttcaaaccagctactatccctgatgccgCagattatattgctggccccatctcttgccttagcaacacaagccacttctcctatttggtggcttatgatgtacccacatttcttattccattggActgcgaggttgtctcagatggccgcattccgataccacatttttcatccggtggtgtctacaagttcagagaaagtgcagaaagagtactcagtttttctgagacgacgatcaagtggacattcctcggaaatgccgtcgccttcaattgctcacggcagtgtgaattccaaggccgacgccgcgcattcagTtcacgaaggaatcagacattCtgcatgcgtccaggtattatttgtaacccggcaaatccctctacagcaggcaccgtcttcgtttattttctgcaaggatcatttctcatttacaaaTatattcatgatgtttacagtttcggcatgctggtgctagaaatggttagcggaaagaggaactcagacacaagtgttgaaagccaaaatgaggtgtacttcccggagtggatctatgaacaggttaccactgggcaggatttggcacttggtagggaaatgactcaagaagagaaagcaacaatgagacagctggctattgtggcactttggtgcattcaatggaacccAaaaaataggccatcaatgacaaaggtggtgaatatgctaacagggaggttgcaaaatctacaaatgccacctaagccgtttttctcagctaacagccatcctaagctgtag
More
|
||||||||||
| Protein seq | MAKLLVVVLLLSLLIYAATAWDAEGFFNFKSCPPHQCSKHGPKVRFPLRLASQSPSCGTPLMELSCSGQDTILYHPVLGSCKVTAISYKHAAMTIIPLVDSTPHCPLQKLISTNLSTDVYKPQTLEAASLSDCKVVSKGIQAPSTFKETENGVIGVDELVFTWYSSDITRDCQKCENEGKHCGFSSQRGRAFCYYATSSAAIIVVLLLIVPIALCLFLKSQYNEEGGFGSIYKGELPNGVPVAVKMLENSIGDGHEFINEVATIGTIHHANVLRLLGFCSEGTRRALIYEFMPNDSLEKYIFSQGSNVSRDYLVPEKMVDVALGIARGMEYLHQGCNQRILHFDIKPHNILLDYRFNPKIADFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGAISYKSDVYSFGILVLEMVSGRRNLEPSIETQHEVYFPEWIYEKVFTGQQLTVGMEMTQVEKDRVRQLAIVALWCIQWNPRNRPSTTQVVNMLTGRLQDLQMPPKPFFSSASESIPTMTETNTGRVKMSSGHALAAAVLLFLLGAQLKKPTAWEDKDFFKSCPPSRCSEHGPEIRFPFQLESNNNTTPSSCGLPCMKLSCYGQDTILDNKYLGRPYKVIAIDYRHITLTLSPLAVAGLEYSSCPLLKSVPIPSVQFPAAPFPYYENWTSCDIYDWEPAALVSCSSEFKPATIPDAADYIAGPISCLSNTSHFSYLVAYDVPTFLIPLDCEVVSDGRIPIPHFSSGGVYKFRESAERVLSFSETTIKWTFLGNAVAFNCSRQCEFQGRRRAFSSRRNQTFCMRPGIICNPANPSTAGTVFVYFLQGSFLIYKYIHDVYSFGMLVLEMVSGKRNSDTSVESQNEVYFPEWIYEQVTTGQDLALGREMTQEEKATMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGRLQNLQMPPKPFFSANSHPKL |
||||||||||
| Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0001250 | OsNaBo_01g0001250.01 | Chr01 | 900361 | 910264 | + | NAM | ||
| CDS seq | atggctaaacttcttgttgtagtgctgctactatctcttctcatctatgcggccacagcatggGATgctgagggcttcttcaacttcaagagttgtccaccacatcagtgcagcaaacatggaccaaaagtccggttcccactccgccttgcgtcacaatctccgtcatgcggcacacctctcatggagttatcatgttctggacaggacaccatcctgtatcacccagttctaggctcctgcaaggtgactgcaatatcttacaagcatgctgccatgaccatcatcccgcttgtagattccacacctcactgcccacttcagaagctcatctctacaaatttatcaactgatgtgtacaaacctcaaacattggaagctgcaagcttatcagactgcaaagttgttagtaaaggcatccaGgcaccctcaacttttaaggaaacagaaaatggAgtaatcggtgttgatgagttggtattcacttggtactccagtgacataaccagagattgtcaaaaatgtgaaaatgaaggcaaacactgtggtttcagctcacaaaggggccgagcattctgctattatgcaacgtcatctgcagccatcattgtagTtcttttgcttatAGTgcccattgcaCTctgtcTtttcctgaagtcgcagtataacgaagagggtggttttggaagtatatacaagggtgagctaccaaatggagtacctgtggcagttaagatgctagaaaattctataggagatgggcatgAATTCatCaatGaaGttgcaaccattgggacaatccaccatgccaatgtgctCcgccttttgggtttttgttcagaaggaacaagaCgtgctttaatttatgaattcatgCctaatgactcattggagaaATatatattctcacaaggttctaatgtgtcaagggactacctaGtacctgaaaaaatggtagatgtcgctttaggcattgcaagaggaaTggagtacctacatcaaggatgcaatcagcgcattctccatttcgatatcaagcctcacaATatattactagattacagatttaacccaaagattgcAgaTtttgggcttgcaaagcTGtgtgcaagggatcaaagcattgtcacgttgactgcagcaagaggcacaatgggctacattgcaCcagaatTAtaTtctcggaactttggagccaTatcatacaagtcagatgtttatagtttcggcatacTggTtttagaaatggtgagtggaagaaggaaCctggagccaagtattgagacccaacatgaggtttatttCcccgagtggatttatgaaaaagtatttactgggcaacagttaacagttggtatggaaatgaCacaggtagaaaaagatagagtgagacaactggcaattgtggcactatggtgcattcagtggaacccgagaaACaggccTTcaaCgacccaggtggttaacatgctaacaggaaggttgcaggatctgcagatgcctcctaaACCcTttttctcatctgcaagcgaatcTataccgaccatgacagaaacgaatactggtcgagttaagatgagctctggacatgctcttgcggcagccgtgttgctgtttcttcttggagctcagttgaagaagcccacagcgtgggaagacaaggaTttcttcaaatcatgcccgccgTcgCggtgcagcgagcatggcccggagatcaggttCcctttccaacttgaatccaacaataatactacaccatcctcatgcggcttaccatgcatgaagctatcatgctatggccaagacaccatccTtgataacaaataccttggaaggccatacaaggtgatcgccAtagattacaggcatattaccctgacactctccccgcttgcagtcgcaggCTtggaatactCctcctgCccgcttctaaaatcggtaccaattccttctgtacagtttcctgccgcaccatttccttattatgaaaactggacctcctgcgacatatacgattgggaacctgcagcactagtaagctgttcatcagagttcaaaccagctactatccctgatgccgCagattatattgctggccccatctcttgccttagcaacacaagccacttctcctatttggtggcttatgatgtacccacatttcttattccattggActgcgaggttgtctcagatggccgcattccgataccacatttttcatccggtggtgtctacaagttcagagaaagtgcagaaagagtactcagtttttctgagacgacgatcaagtggacattcctcggaaatgccgtcgccttcaattgctcacggcagtgtgaattccaaggccgacgccgcgcattcagTtcacgaaggaatcagacattCtgcatgcgtccaggtattatttgtaacccggcaaatccctctacagcaggcaccgtcttcgtttattttctgcaaggatcatttctcatttacaaaTatattcatgatgtttacagtttcggcatgctggtgctagaaatggttagcggaaagaggaactcagacacaagtgttgaaagccaaaatgaggtgtacttcccggagtggatctatgaacaggttaccactgggcaggatttggcacttggtagggaaatgactcaagaagagaaagcaacaatgagacagctggctattgtggcactttggtgcattcaatggaacccAaaaaataggccatcaatgacaaaggtggtgaatatgctaacagggaggttgcaaaatctacaaatgccacctaagccgtttttctcagctaacagccatcctaagctgtag
More
|
|||||||
| Protein seq | MAKLLVVVLLLSLLIYAATAWDAEGFFNFKSCPPHQCSKHGPKVRFPLRLASQSPSCGTPLMELSCSGQDTILYHPVLGSCKVTAISYKHAAMTIIPLVDSTPHCPLQKLISTNLSTDVYKPQTLEAASLSDCKVVSKGIQAPSTFKETENGVIGVDELVFTWYSSDITRDCQKCENEGKHCGFSSQRGRAFCYYATSSAAIIVVLLLIVPIALCLFLKSQYNEEGGFGSIYKGELPNGVPVAVKMLENSIGDGHEFINEVATIGTIHHANVLRLLGFCSEGTRRALIYEFMPNDSLEKYIFSQGSNVSRDYLVPEKMVDVALGIARGMEYLHQGCNQRILHFDIKPHNILLDYRFNPKIADFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGAISYKSDVYSFGILVLEMVSGRRNLEPSIETQHEVYFPEWIYEKVFTGQQLTVGMEMTQVEKDRVRQLAIVALWCIQWNPRNRPSTTQVVNMLTGRLQDLQMPPKPFFSSASESIPTMTETNTGRVKMSSGHALAAAVLLFLLGAQLKKPTAWEDKDFFKSCPPSRCSEHGPEIRFPFQLESNNNTTPSSCGLPCMKLSCYGQDTILDNKYLGRPYKVIAIDYRHITLTLSPLAVAGLEYSSCPLLKSVPIPSVQFPAAPFPYYENWTSCDIYDWEPAALVSCSSEFKPATIPDAADYIAGPISCLSNTSHFSYLVAYDVPTFLIPLDCEVVSDGRIPIPHFSSGGVYKFRESAERVLSFSETTIKWTFLGNAVAFNCSRQCEFQGRRRAFSSRRNQTFCMRPGIICNPANPSTAGTVFVYFLQGSFLIYKYIHDVYSFGMLVLEMVSGKRNSDTSVESQNEVYFPEWIYEQVTTGQDLALGREMTQEEKATMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGRLQNLQMPPKPFFSANSHPKL
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0001250 | OsNaBo_01g0001250.02 | Chr01 | 900222 | 901574 | + | IsoSeq | ||
| CDS seq | atgcggccacagcatggGATgctgagggcttcttcaacttcaagagttgtccaccacatcagtgcagcaaacatggaccaaaagtccggttcccactccgccttgcgtcacaatctccgtcatgcggcacacctctcatggagttatcatgttctggacaggacaccatcctgtatcacccag |
|||||||
| Protein seq | MRPQHGMLRASSTSRVVHHISAANMDQKSGSHSALRHNLRHAAHLSWSYHVLDRTPSCITQ |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.318302 | 2.614865 | 3.029929 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0117300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02710 | SBH | 2.755430 | 4.150273 | 1.149388 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0117300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001330 | SBH | 0.173494 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001200 | SBH | 0.280931 | 0.882898 | 0.439823 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001250 | SBH | 10.201883 | 0.0 | 2.732177 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001180 | SBH | 0.675559 | 0.081542 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001250 | SBH | 12.260585 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0016900 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001170 | SBH | 2.912498 | 0.0 | 2.308542 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0015900 | RBH | 3.8578395 | 0.36971 | 0.170273 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001140 | SBH | 2.255941 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001290 | SBH | 4.309310 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001230 | RBH | 5.305496 | 3.892169 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001290 | RBH | 1.755259 | 0.526992 | 0.360528 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001190 | SBH | 2.171269 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001290 | SBH | 3.659225 | 0.0 | 0.478276 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001220 | RBH | 3.649381 | 0.000000 | 1.464393 |
