Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0001240 | OGI:01002250 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:899004-899486 | ||||||||
| Gene Symbol | RLCK18, OsRLCK18 | ||||||||||
| DNA seq | tcagctaaataagatcccaggccagttagcacatactccgacgaaagaagagttgctgctccggcaagccacaggcctgtacatgacattgttgctgttcatttcctgcgagcatttcacaaaggtagcgaaccaatccacatcatgggacaactgaacttgtacacggcggtgtgaatcttctccaagcctgtagttttcattataaggactctgactccaccgaggaagagggcagttgttagctgaatccaagcttgcatcgaccacccacaagtactgatcactgtagttgatgtcagtgaccaagtactccagtattttgccttgtcgatctgaattgtagcattgctgtctgcacagcacaggtcagctcatatgatggaacaccgcattcagcgggtaatctggtacaacaagtgcaagcacagagaaggcagccatggcctgttgggcagcagaacaacgaaatgcaccagccat
More
|
||||||||||
| CDS seq | atggctggtgcatttcgttgttctgctgcccaacaggccatggctgccttctctgtgcttgcacttgttgtaccagattacccgctgaatgcgcaatgctacaattcagatcgacaaggcaaaatactggagtacttggtcactgacatcaactacagtgatcagtacttgtgggtggtcgatgcaagcttggattcagctaacaactgccctcttcctcggtggagtcagagtccttataatgaaaactacaggcttggagaagattcacaccgccgtgtacaagttcagttgtcccatgatgtggattggttcgctacctttgtgaaatgctcgcaggaaatgaacagcaacaatgtcatgtacaggcctgtggcttgccggagcagcaactcttctttcgtcggagtatgtgctaactggcctgggatcttatttagctga
More
|
||||||||||
| Protein seq | MAGAFRCSAAQQAMAAFSVLALVVPDYPLNAQCYNSDRQGKILEYLVTDINYSDQYLWVVDASLDSANNCPLPRWSQSPYNENYRLGEDSHRRVQVQLSHDVDWFATFVKCSQEMNSNNVMYRPVACRSSNSSFVGVCANWPGILFS |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0001240 | OsNaBo_01g0001240.01 | Chr01 | 899004 | 899486 | - | NAM | ||
| CDS seq | atggctggtgcatttcgttgttctgctgcccaacaggccatggctgccttctctgtgcttgcacttgttgtaccagattacccgctgaatgcgcaatgctacaattcagatcgacaaggcaaaatactggagtacttggtcactgacatcaactacagtgatcagtacttgtgggtggtcgatgcaagcttggattcagctaacaactgccctcttcctcggtggagtcagagtccttataatgaaaactacaggcttggagaagattcacaccgccgtgtacaagttcagttgtcccatgatgtggattggttcgctacctttgtgaaatgctcgcaggaaatgaacagcaacaatgtcatgtacaggcctgtggcttgccggagcagcaactcttctttcgtcggagtatgtgctaactggcctgggatcttatttagctga
More
|
|||||||
| Protein seq | MAGAFRCSAAQQAMAAFSVLALVVPDYPLNAQCYNSDRQGKILEYLVTDINYSDQYLWVVDASLDSANNCPLPRWSQSPYNENYRLGEDSHRRVQVQLSHDVDWFATFVKCSQEMNSNNVMYRPVACRSSNSSFVGVCANWPGILFS |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 2.747646 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0116400 | SBH | 1.395107 | 1.867418 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02700 | SBH | 0.909079 | 1.319252 | 0.129904 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0116400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001260 | RBH | 0.000000 | 6.048750 | 1.800528 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001140 | SBH | 0.956421 | 0.000000 | 0.853077 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001230 | SBH | 0.875923 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001170 | RBH | 0.015936 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001240 | SBH | 11.364197 | 1.983415 | 9.245715 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0016200 | SBH | 4.024279 | 0.070286 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001160 | SBH | 0.674845 | 0.207849 | 1.722675 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0015200 | SBH | 1.617323 | 0.890693 | 1.779883 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001160 | SBH | 0.000000 | 0.060760 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001270 | SBH | 0.403272 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001220 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001240 | SBH | 0.000000 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001170 | SBH | 0.439994 | 3.612951 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001270 | SBH | 0.271850 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001210 | SBH | 2.894186 | 0.000000 | 0.000000 |
