Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsN22_12G016740		OGI:12059120 \| 15/16			N22 \| OsN22RS2 \| Gramene(+IsoSeq)			Chr12:21710142-21713812		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GGCAAATTAAACATACATTCAACAAGTTAAAAAAAAAACATTCAACAAGCTGACGATATGCAGCTCTAATTGTCACTGTTCTTTCAATCTCAATTCAAAAAATATATAGCTGGCAAATATTTCTCTCTCTCTCTCTCCAGATGTCACTTTGTTCTTGGCAGTTGGCACAAGTAACTTTTAGCATATCTCAAATCTACAACACTGTAGCCGGTTAGCCACATCACCATGATGCGAAATAATCACTCCACCGATAATGTTGCTAGATGTTTACATATAAACAGCAGCAACAAATGTACGCGCATGTGTGGATCAGTGTTCTTCACCTCCAGAACACAGAAATCTAAAATTTATAATAGAGAACTCAATATCAGGAGGAGGCAGCTCTTTACTTCATGTGATCATTAACATGAAAGGAAATTCCTTTAGGTTTGGACTTTGGAACTAGTGTGAAGGGATTAGAGCACTGATAATCTCTAACTTGACAGTGAGCTTTGAAACAGCCAAGAACCACTGGTCCTCAGCAAGGGAGGAACCACTCAGCTTTTTGTTTCTGTATGGTATTTGTTTCCCAAGAGAAAAGCATTGCACGTATACCGTTCATAAGCCAACTGCCCTGTAAAAACAATAAAAACCAATTAGTAAACCAAAACAAATGGTTCAGGAAGTTGAGAACAATACAGGACTAATGAATGCAACAACAAATCAGGACTGGAGGACCACTGTACCTATCGAACCTACAATGTCAGAATGTACAAAAGAGCAATATCAAGCTGAAATCCCTGCTGCTTTTCCAGTCCATGTGAGTATAAAAGCATCATTGTTTCCTTCCCAGCCAAATTCTGTGAGCAAGTTCTCAAAGTTCATTGGAATGCTTAGTTGGTGTTACATCTTTAGTGGGGGCATGTTGGTAGACTACTGATCGTGATACACTGATTTTTTCCAGTGACTATTTTCTGTTCACAATTATTTTAAACCAAAATCTTTTTGAATGTTTTCGCTTTCAATTTGTATGATGATGCTTCACAGCTAATCAAATACAAGGAAAATTACAAATGCAGTTAAGTTTTTCTTAGCTTATGTCTTGTCTTTAGCAGTATTCACAAGATCAAAAATAGTGAACTTTTTATGAAGCCTATGATGCACCAAAGTTACCAGAACATGTGAAAGTGTTAAAAGGAATGCACCGATTTGTTCTGCAATTGTTTCCTGAGTAGAAAGCTTAAATCCATATCATTTTTGAAATTCCATCGATGCCATAGAGCTTAATATCTCTATGGCGTTGGAAGGTACAAATCCTTCATCTGGAAACAATATTCAACATAGAGAAACATAAGCTTTTGTTACCACGATTAGGTGCGATTGAAATAAGAAACAGAGTGTTGAGAAAATATTGCGACAACAGATTATGTGAAGCAATTATTGAGGTGTTGATCTAATGTACCTTAAGCAAAGATGAGGCTGTTTTGCACCTTTCACTGAGGATAGGGCATCATTCATGTGTAAATTAGCATGCAGTCAATAGATCACACTTCACGCATTGACAACTTGAACAGCAACTTCAGACTCTATGCTCTGATTAGAGCCACAACTCGACTGAGCATTTCTACTGAGGTATTTATCCATTAACTCTCCTGCCTCACTGAATTGACCCATTTTTGCAAGTGCAGCAACAATTGGCCAATATGATTGATTATTGCTCGTGCTGCAGCCACTGCGCTCCCTTGCAAATAGAATTTCTTTGGCCTTATTGACTCTCCTTTCATCACATAGAGCTTTTATCAGGGAATTGTATGTGTAACTGTCTGGAACCACACCAAATCTCACCATGTCATTGAAAATATCTTCAGCTTTATCTACCTTCCTCATCCGGCAAAAACTCAAGATGAGGGCATTGAAGGAATATGCATCAGGAGTAACGCCATCTATTTTCATTTTATTAAGAAGATCAATAGCCTTGTTAACATGCCCTGCTGAACAAAGTGTGTGCATTAATACATTGTAAGTCTGAGCATTTGGTCTAACACCCCACTCTGCCATCTCTTCAAAGCAAACAAAAGCATCATCCAGTTGATGGGTATTGCACAGGCCATCAATAAGAGAGGTAAATGTAATGATATCTGGCATGAAACCATGTTCCATAAGCATCTTAAGAACAACCTTTGCATTATGTACATTCCCTAATTTTGAATATCCACTTATTAGTGTGTTAAAGGTGACAAGGTTAGGCAAGAAACCTTTGTCTTGCATCTCCTTGACAATCTCCTCTGCTTTATCAACTGCCCCGGCCTTCACGAAGCAATCTATCACCATGTTGTAAGACATCACACTAGACAAGAGTCCCTTTAAAACCATGTGCCCCAAATAGTGGTTTGCCTTCGAAAAATTCTTGCAGTTCAGCAAGGATTTGATTACCATAATATATACATCAAATCCTGGATTCCCGCCATTCTTAATGAAAGAATCTAGTAACTCACATAGATCACTCACCTCCAGGCATTTCAGAGCACAAGACATGACAATGCCAAATGCTGTGCTGTCAAGGAGATAACCCCTAGCACTCATCCTCTTCTCAAACTCAACTGCCTCTTTGGCCATGTCCTTCTTCGACAGGCAATACAGCATCGTGTGGCATGCGCTCGGGTGAAGGGACGTCTCATGGCCTAGCCAATCACTCAACATCCTGTATGCCTTGTCTCTCTCCAAGCAGCGAAACACGCCATGAACCAGTGTCCTGTAAGTGGCCTCGCTCGGCGCCACGCCCTTCTCCTTCATCTTGTCCAGCATACGGAACGCCTCCTCCACCCTGCCGGCATTGCAGAACCCGTCCACCAGCATGGTGTACGTGAACACGTTCGGCCTGATCCCCTCCCCCTCCATCTGCCTCACCAGCCGGACCGCCTCATCGACGATCCCGCGCCGGCACACGCCGTGGACGAGCGAGTTGTACGTGAAGTGGTCGGGCCGGCACCCGTCGGCGGGCATCTGCTGGAACCTGAGGTACGCGGTGTCGACGGCCCCCGCCCTCACCGACGCCGCGATCAGCGCGTTGTACACCGCCGTGCTGGGCCTCAGACCCAGCCGCGGCATTTGCACGAACACCTCGTGCGCGTAGCGTGCGAGCCCCAGCCTGCCCCAGCTCTCCACCAGCGCGCACACCAGCTCCTCCGACACCTCGCACCCGCAACCCCTCACCTCCGCCACCAGCCTCCCCGACAGCACCACCGGCCCGCGCCGCCACAGCGCGCCCACGAGCGCCCGCCGCACGCCGCCGTCGCGCGCGAAGTGGGCGCCGAACCGCGACGCCCACACGTAGAGCCGCACGCAGAGCAGCGGCTCCCCCAACCCCTCCCTCTCCGCCGCCGCACGAAGCGCGCGGACGACGAAGCGGGGGCCGAGGCGGGGGAGCGCGGCGGCGAACTCGGCGTTGAGACGGGGGAACCAGTCGTCCTCGGCCAAGATCGAGGCGGCGCGGGCAGGGTCGGCGGGGTCCGGTGGGTTCGCGGCGGATTTGGTGGAGAGGCTGGATCTCGGTGGGGTTTCGGGGCGGCGATTTGCGCCGGAGAGGCGGCGGCAGCGGCGGCGGCGGAGGAGGAGGAGATTGGGGTGATGGATGCTCCTCATTTGCGGTTTGCATCCAACAAAAATCGCCGCCTTTCTGGTCTGGGTGTTCA More
CDS seq		ATGAGGAGCATCCATCACCCCAATCTCCTCCTCCTCCGCCGCCGCCGCTGCCGCCGCCTCTCCGGCGCAAATCGCCGCCCCGAAACCCCACCGAGATCCAGCCTCTCCACCAAATCCGCCGCGAACCCACCGGACCCCGCCGACCCTGCCCGCGCCGCCTCGATCTTGGCCGAGGACGACTGGTTCCCCCGTCTCAACGCCGAGTTCGCCGCCGCGCTCCCCCGCCTCGGCCCCCGCTTCGTCGTCCGCGCGCTTCGTGCGGCGGCGGAGAGGGAGGGGTTGGGGGAGCCGCTGCTCTGCGTGCGGCTCTACGTGTGGGCGTCGCGGTTCGGCGCCCACTTCGCGCGCGACGGCGGCGTGCGGCGGGCGCTCGTGGGCGCGCTGTGGCGGCGCGGGCCGGTGGTGCTGTCGGGGAGGCTGGTGGCGGAGGTGAGGGGTTGCGGGTGCGAGGTGTCGGAGGAGCTGGTGTGCGCGCTGGTGGAGAGCTGGGGCAGGCTGGGGCTCGCACGCTACGCGCACGAGGTGTTCGTGCAAATGCCGCGGCTGGGTCTGAGGCCCAGCACGGCGGTGTACAACGCGCTGATCGCGGCGTCGGTGAGGGCGGGGGCCGTCGACACCGCGTACCTCAGGTTCCAGCAGATGCCCGCCGACGGGTGCCGGCCCGACCACTTCACGTACAACTCGCTCGTCCACGGCGTGTGCCGGCGCGGGATCGTCGATGAGGCGGTCCGGCTGGTGAGGCAGATGGAGGGGGAGGGGATCAGGCCGAACGTGTTCACGTACACCATGCTGGTGGACGGGTTCTGCAATGCCGGCAGGGTGGAGGAGGCGTTCCGTATGCTGGACAAGATGAAGGAGAAGGGCGTGGCGCCGAGCGAGGCCACTTACAGGACACTGGTTCATGGCGTGTTTCGCTGCTTGGAGAGAGACAAGGCATACAGGATGTTGAGTGATTGGCTAGGCCATGAGACGTCCCTTCACCCGAGCGCATGCCACACGATGCTGTATTGCCTGTCGAAGAAGGACATGGCCAAAGAGGCAGTTGAGTTTGAGAAGAGGATGAGTGCTAGGGGTTATCTCCTTGACAGCACAGCATTTGGCATTGTCATGTCTTGTGCTCTGAAATGCCTGGAGGTGAGTGATCTATGTGAGTTACTAGATTCTTTCATTAAGAATGGCGGGAATCCAGGATTTGATGTATATATTATGGTAATCAAATCCTTGCTGAACTGCAAGAATTTTTCGAAGGCAAACCACTATTTGGGGCACATGGTTTTAAAGGGACTCTTGTCTAGTGTGATGTCTTACAACATGGTGATAGATTGCTTCGTGAAGGCCGGGGCAGTTGATAAAGCAGAGGAGATTGTCAAGGAGATGCAAGACAAAGGTTTCTTGCCTAACCTTGTCACCTTTAACACACTAATAAGTGGATATTCAAAATTAGGGAATGTACATAATGCAAAGGTTGTTCTTAAGATGCTTATGGAACATGGTTTCATGCCAGATATCATTACATTTACCTCTCTTATTGATGGCCTGTGCAATACCCATCAACTGGATGATGCTTTTGTTTGCTTTGAAGAGATGGCAGAGTGGGGTGTTAGACCAAATGCTCAGACTTACAATGTATTAATGCACACACTTTGTTCAGCAGGGCATGTTAACAAGGCTATTGATCTTCTTAATAAAATGAAAATAGATGGCGTTACTCCTGATGCATATTCCTTCAATGCCCTCATCTTGAGTTTTTGCCGGATGAGGAAGGTAGATAAAGCTGAAGATATTTTCAATGACATGGTGAGATTTGGTGTGGTTCCAGACAGTTACACATACAATTCCCTGATAAAAGCTCTATGTGATGAAAGGAGAGTCAATAAGGCCAAAGAAATTCTATTTGCAAGGGAGCGCAGTGGCTGCAGCACGAGCAATAATCAATCATATTGGCCAATTGTTGCTGCACTTGCAAAAATGGGTCAATTCAGTGAGGCAGGAGAGTTAATGGATAAATACCTCAGTAGAAATGCTCAGTCGAGTTGTGGCTCTAATCAGAGCATAGAGTCTGAAGTTGCTGTTCAAGTTGTCAATGCGTGA More
Protein seq		MRSIHHPNLLLLRRRRCRRLSGANRRPETPPRSSLSTKSAANPPDPADPARAASILAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLSRNAQSSCGSNQSIESEVAVQVVNA
Function		Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [UniProtKB/Swiss-Prot:Q9LSQ2]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_12G016740	OsN22_12G016740_01	Chr12	21710142	21713812	-	NAM
CDS seq	ATGAGGAGCATCCATCACCCCAATCTCCTCCTCCTCCGCCGCCGCCGCTGCCGCCGCCTCTCCGGCGCAAATCGCCGCCCCGAAACCCCACCGAGATCCAGCCTCTCCACCAAATCCGCCGCGAACCCACCGGACCCCGCCGACCCTGCCCGCGCCGCCTCGATCTTGGCCGAGGACGACTGGTTCCCCCGTCTCAACGCCGAGTTCGCCGCCGCGCTCCCCCGCCTCGGCCCCCGCTTCGTCGTCCGCGCGCTTCGTGCGGCGGCGGAGAGGGAGGGGTTGGGGGAGCCGCTGCTCTGCGTGCGGCTCTACGTGTGGGCGTCGCGGTTCGGCGCCCACTTCGCGCGCGACGGCGGCGTGCGGCGGGCGCTCGTGGGCGCGCTGTGGCGGCGCGGGCCGGTGGTGCTGTCGGGGAGGCTGGTGGCGGAGGTGAGGGGTTGCGGGTGCGAGGTGTCGGAGGAGCTGGTGTGCGCGCTGGTGGAGAGCTGGGGCAGGCTGGGGCTCGCACGCTACGCGCACGAGGTGTTCGTGCAAATGCCGCGGCTGGGTCTGAGGCCCAGCACGGCGGTGTACAACGCGCTGATCGCGGCGTCGGTGAGGGCGGGGGCCGTCGACACCGCGTACCTCAGGTTCCAGCAGATGCCCGCCGACGGGTGCCGGCCCGACCACTTCACGTACAACTCGCTCGTCCACGGCGTGTGCCGGCGCGGGATCGTCGATGAGGCGGTCCGGCTGGTGAGGCAGATGGAGGGGGAGGGGATCAGGCCGAACGTGTTCACGTACACCATGCTGGTGGACGGGTTCTGCAATGCCGGCAGGGTGGAGGAGGCGTTCCGTATGCTGGACAAGATGAAGGAGAAGGGCGTGGCGCCGAGCGAGGCCACTTACAGGACACTGGTTCATGGCGTGTTTCGCTGCTTGGAGAGAGACAAGGCATACAGGATGTTGAGTGATTGGCTAGGCCATGAGACGTCCCTTCACCCGAGCGCATGCCACACGATGCTGTATTGCCTGTCGAAGAAGGACATGGCCAAAGAGGCAGTTGAGTTTGAGAAGAGGATGAGTGCTAGGGGTTATCTCCTTGACAGCACAGCATTTGGCATTGTCATGTCTTGTGCTCTGAAATGCCTGGAGGTGAGTGATCTATGTGAGTTACTAGATTCTTTCATTAAGAATGGCGGGAATCCAGGATTTGATGTATATATTATGGTAATCAAATCCTTGCTGAACTGCAAGAATTTTTCGAAGGCAAACCACTATTTGGGGCACATGGTTTTAAAGGGACTCTTGTCTAGTGTGATGTCTTACAACATGGTGATAGATTGCTTCGTGAAGGCCGGGGCAGTTGATAAAGCAGAGGAGATTGTCAAGGAGATGCAAGACAAAGGTTTCTTGCCTAACCTTGTCACCTTTAACACACTAATAAGTGGATATTCAAAATTAGGGAATGTACATAATGCAAAGGTTGTTCTTAAGATGCTTATGGAACATGGTTTCATGCCAGATATCATTACATTTACCTCTCTTATTGATGGCCTGTGCAATACCCATCAACTGGATGATGCTTTTGTTTGCTTTGAAGAGATGGCAGAGTGGGGTGTTAGACCAAATGCTCAGACTTACAATGTATTAATGCACACACTTTGTTCAGCAGGGCATGTTAACAAGGCTATTGATCTTCTTAATAAAATGAAAATAGATGGCGTTACTCCTGATGCATATTCCTTCAATGCCCTCATCTTGAGTTTTTGCCGGATGAGGAAGGTAGATAAAGCTGAAGATATTTTCAATGACATGGTGAGATTTGGTGTGGTTCCAGACAGTTACACATACAATTCCCTGATAAAAGCTCTATGTGATGAAAGGAGAGTCAATAAGGCCAAAGAAATTCTATTTGCAAGGGAGCGCAGTGGCTGCAGCACGAGCAATAATCAATCATATTGGCCAATTGTTGCTGCACTTGCAAAAATGGGTCAATTCAGTGAGGCAGGAGAGTTAATGGATAAATACCTCAGTAGAAATGCTCAGTCGAGTTGTGGCTCTAATCAGAGCATAGAGTCTGAAGTTGCTGTTCAAGTTGTCAATGCGTGA More
Protein seq	MRSIHHPNLLLLRRRRCRRLSGANRRPETPPRSSLSTKSAANPPDPADPARAASILAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLSRNAQSSCGSNQSIESEVAVQVVNA More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsN22_12G016740	OsN22_12G016740_02	Chr12	21711126	21713812	-	NAM
CDS seq	ATGAGGAGCATCCATCACCCCAATCTCCTCCTCCTCCGCCGCCGCCGCTGCCGCCGCCTCTCCGGCGCAAATCGCCGCCCCGAAACCCCACCGAGATCCAGCCTCTCCACCAAATCCGCCGCGAACCCACCGGACCCCGCCGACCCTGCCCGCGCCGCCTCGATCTTGGCCGAGGACGACTGGTTCCCCCGTCTCAACGCCGAGTTCGCCGCCGCGCTCCCCCGCCTCGGCCCCCGCTTCGTCGTCCGCGCGCTTCGTGCGGCGGCGGAGAGGGAGGGGTTGGGGGAGCCGCTGCTCTGCGTGCGGCTCTACGTGTGGGCGTCGCGGTTCGGCGCCCACTTCGCGCGCGACGGCGGCGTGCGGCGGGCGCTCGTGGGCGCGCTGTGGCGGCGCGGGCCGGTGGTGCTGTCGGGGAGGCTGGTGGCGGAGGTGAGGGGTTGCGGGTGCGAGGTGTCGGAGGAGCTGGTGTGCGCGCTGGTGGAGAGCTGGGGCAGGCTGGGGCTCGCACGCTACGCGCACGAGGTGTTCGTGCAAATGCCGCGGCTGGGTCTGAGGCCCAGCACGGCGGTGTACAACGCGCTGATCGCGGCGTCGGTGAGGGCGGGGGCCGTCGACACCGCGTACCTCAGGTTCCAGCAGATGCCCGCCGACGGGTGCCGGCCCGACCACTTCACGTACAACTCGCTCGTCCACGGCGTGTGCCGGCGCGGGATCGTCGATGAGGCGGTCCGGCTGGTGAGGCAGATGGAGGGGGAGGGGATCAGGCCGAACGTGTTCACGTACACCATGCTGGTGGACGGGTTCTGCAATGCCGGCAGGGTGGAGGAGGCGTTCCGTATGCTGGACAAGATGAAGGAGAAGGGCGTGGCGCCGAGCGAGGCCACTTACAGGACACTGGTTCATGGCGTGTTTCGCTGCTTGGAGAGAGACAAGGCATACAGGATGTTGAGTGATTGGCTAGGCCATGAGACGTCCCTTCACCCGAGCGCATGCCACACGATGCTGTATTGCCTGTCGAAGAAGGACATGGCCAAAGAGGCAGTTGAGTTTGAGAAGAGGATGAGTGCTAGGGGTTATCTCCTTGACAGCACAGCATTTGGCATTGTCATGTCTTGTGCTCTGAAATGCCTGGAGGTGAGTGATCTATGTGAGTTACTAGATTCTTTCATTAAGAATGGCGGGAATCCAGGATTTGATGTATATATTATGGTAATCAAATCCTTGCTGAACTGCAAGAATTTTTCGAAGGCAAACCACTATTTGGGGCACATGGTTTTAAAGGGACTCTTGTCTAGTGTGATGTCTTACAACATGGTGATAGATTGCTTCGTGAAGGCCGGGGCAGTTGATAAAGCAGAGGAGATTGTCAAGGAGATGCAAGACAAAGGTTTCTTGCCTAACCTTGTCACCTTTAACACACTAATAAGTGGATATTCAAAATTAGGGAATGTACATAATGCAAAGGTTGTTCTTAAGATGCTTATGGAACATGGTTTCATGCCAGATATCATTACATTTACCTCTCTTATTGATGGCCTGTGCAATACCCATCAACTGGATGATGCTTTTGTTTGCTTTGAAGAGATGGCAGAGTGGGGTGTTAGACCAAATGCTCAGACTTACAATGTATTAATGCACACACTTTGTTCAGCAGGGCATGTTAACAAGGCTATTGATCTTCTTAATAAAATGAAAATAGATGGCGTTACTCCTGATGCATATTCCTTCAATGCCCTCATCTTGAGTTTTTGCCGGATGAGGAAGGTAGATAAAGCTGAAGATATTTTCAATGACATGGTGAGATTTGGTGTGGTTCCAGACAGTTACACATACAATTCCCTGATAAAAGCTCTATGTGATGAAAGGAGAGTCAATAAGGCCAAAGAAATTCTATTTGCAAGGGAGCGCAGTGGCTGCAGCACGAGCAATAATCAATCATATTGGCCAATTGTTGCTGCACTTGCAAAAATGGGTCAATTCAGTGAGGCAGGAGAGTTAATGGATAAATACCTCAGTAGAAATGCTCAGTCGAGTTGTGGCTCTAATCAGAGCATAGAGTCTGAAGTTGCTGTTCAAGTTGTCAATGCGTGA More
Protein seq	MRSIHHPNLLLLRRRRCRRLSGANRRPETPPRSSLSTKSAANPPDPADPARAASILAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLSRNAQSSCGSNQSIESEVAVQVVNA More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.370153	1.660556	1.108235

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_12g0557800	RBH	1.634631	0.943517	1.472650
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os12g37100	RBH	1.118113	0.637314	0.374340
Nipponbare \| IRGSP 1.0 \| RAP-db	Os12g0557800	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_12g0017070	RBH	0.416359	3.152740	2.277479
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_12g0017190	RBH	0.203747	1.070994	2.217284
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_12g0017550	RBH	0.335646	0.000000	3.763598
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_12g0016870	RBH	0.049081	0.035434	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_12g0016470	RBH	2.417380	3.926570	4.296042
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_12G0364300	SBH	0.0541555	0.9490425	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_12g0016370	RBH	0.193744	0.000000	0.390772
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_12G0332700	RBH	2.9165055	4.491053	15.4628095
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_12g0016610	RBH	0.132710	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_12g0016850	RBH	0.000000	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_12g0016810	RBH	2.442729	5.049098	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_12g0016790	RBH	0.218279	0.0	0.368778
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_12g0016970	RBH	0.000000	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	NA	NA	NA	NA	NA
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_12g0016400	RBH	1.432644	1.836925	2.188028

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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