Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G022900 | OGI:11075990 | 9/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:29029954-29030339 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGTCGGCAGGCTCATCTCCATGATCATGCAGGCGGCGTTGCCGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGTGTGTTCATGATCGCCGAGCTGCTGCCGCACCTGCAGGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACGCTCCGGCGGTGACTAAGTACAAACTGCTAGATGTGAACACTCGCACCTCCCCTGCTGCTCTTATGGATCTTGCGGCGGCATGCGATCTGGGCGAACGTGATTTCGATCAGCTCTCCAAGGTGCTAGCTGATGCTGCTCATGCTGTCAACTGA |
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| CDS seq | ATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGTCGGCAGGCTCATCTCCATGATCATGCAGGCGGCGTTGCCGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACGCTCCGGCGGTGACTAAGTACAAACTGCTAGATGTGAACACTCGCACCTCCCCTGCTGCTCTTATGGATCTTGCGGCGGCATGCGATCTGGGCGAACGTGATTTCGATCAGCTCTCCAAGGTGCTAGCTGATGCTGCTCATGCTGTCAACTGA |
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| Protein seq | MWSGMGQAATVAQLVGADVGRLISMIMQAALPAQRNKKECEQLARRPGGDAAAGGPAVAGRARRHAPAVTKYKLLDVNTRTSPAALMDLAAACDLGERDFDQLSKVLADAAHAVN |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G022900 | OsN22_11G022900_01 | Chr11 | 29029954 | 29030339 | + | NAM | ||
| CDS seq | ATGTGGAGCGGGATGGGGCAGGCGGCGACGGTGGCGCAGCTGGTCGGCGCAGACGTCGGCAGGCTCATCTCCATGATCATGCAGGCGGCGTTGCCGGCTCAGCGGAACAAGAAGGAGTGCGAGCAGCTCGCCCGCCGACCCGGAGGTGATGCGGCGGCCGGAGGTCCGGCGGTCGCTGGCCGGGCTCGGCGACACGCTCCGGCGGTGACTAAGTACAAACTGCTAGATGTGAACACTCGCACCTCCCCTGCTGCTCTTATGGATCTTGCGGCGGCATGCGATCTGGGCGAACGTGATTTCGATCAGCTCTCCAAGGTGCTAGCTGATGCTGCTCATGCTGTCAACTGA
More
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| Protein seq | MWSGMGQAATVAQLVGADVGRLISMIMQAALPAQRNKKECEQLARRPGGDAAAGGPAVAGRARRHAPAVTKYKLLDVNTRTSPAALMDLAAACDLGERDFDQLSKVLADAAHAVN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0666100 | SBH | 0.119349 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44510 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0666100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023030 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023090 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022430 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022600 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0398300 | SBH | 0.033022 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023570 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0419600 | SBH | 0 | 0 | 0.0053005 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023200 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022910 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022650 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022540 | SBH | 0.0 | 1.027365 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023330 | RBH | 0.000000 | 0.000000 | 0.0 |
