Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G022860 | OGI:11076320 | 8/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:28930156-28934996 | ||||||||
| Gene Symbol | WRKY41, OsWRKY41 | ||||||||||
| DNA seq | ATGCACCTACAAAATTCCATACCCTCAAGTCTAGGTACCAATTCTACTGCTGAAGGGATGAATGAACTTCTAAGCCTTATCTACAATATTCTTCCACATGATTTGAAAACATGCTTGCTACATTTTAACATGTATCCTGAGGACTACACGATCAGGAAGGATGATTTGGTGAAGCAATGGGTAGCTGAAGGGTTTGTCCATGAAGTAAATGGGCAAGACGCGGACGTTGTTGCTAAAATATATTTTGATGAACTTATCATTAGAGGATTGATCCAACCAGTAGATATCAATTATAACAATGAGGTGCTGTCATGTACAGTTCATCACATCGTGTTGGATTTTATTAGGTACAAATCCAAGGAGGAGAATTTCATTACTATTATGGACTATTTCCAAGCAAGACCTGGAAATCTGGACAAAGTTCGTCGATTGTCCATGCAGTTTGGAAGTGTGAAAGGTGCAAAGATATCGGCGGGAAGCATCAGAATGAGCCAAATTCGGTCACTTGTATATTTCGGATTCTTCAAATGTGTACCTTCCGTTACAGAGTATGCTCTACTGCGAGTTCTGATTCTTCATGTTTGGGCAGATAAAGACAAGATATGTTTTGACCTCTCTAGCATTCAGGAACTATTTCGACTGAGATATCTGAAGGTTGCATGTAATGTAGGTGTCAAGTTTCCATCCAAGATTAGACGATTACAATACTTGGAGACGCTGGATTTAGATGCAAGAGTGGTTGGTTTTCCATTAGATATCGTTCAATTGCAGAATTTATTGCATGTCCGCCTTCCACGTGAGACTAATATGCCCAATGGGATTGACAAGATGACATCACTTCGCAGTTTAGCGTATCTTCAGCTCTCTGATAGCTCAAGAGACAATGTGTTGAGACTTGGCAAGCTGACCAATTTACAGGATCTCCATCTAACCTGTTCTGGAATAGTACAAACTGACCGTGTGGTTGTTAACTTGAAAAGTCTTGGGTCTATCATGGAAAAACTCAGAAAACTGAAATCTCTAATTCTAGATGGTGGTGCTTCAACCACGAGCATCCCCTGTGATGATTTGAGCATATTGTCCTATCCGCCACCCAATCTTCAGAAGCTTGAGTTGTCGCCACAATTCTTTATCTTTCCCAGCCTCCCTGAGTGGATTGGAAAACTTAGCAAACTGTGCAATCTAAAGATTGCAGTCAGGGACTTACCAAGGAATAACATTGACATTATTAAAAGATTGACTACTCTTACTGTTCTCTCGCTCTCTGTGCGGACCACCCCTGCAGACCGGATTGTTTTTGACAAAGGATTCCATGGAATCAGGTACTTCAAGTTCACGTCTACTGCACCATGTTTGTCCTTTGCGGAAGGAGCGATGGTTAATGTTGTAAGGCTTAAGTTAGTTTTCAATGCCAGTAGCATAGAGGAATATGACCTTACATCTGTTTGCTTCCAGTATTTAACTTCCCTTAAAGATATCTCTGTAAAATTTGGAGACACCAGTTCTTATTTGCCAAGCGGAAGGAATGCAGCAGAGAGTGCACTGGTCGCTGCGGTTAGCAAGCATCCAAGCAGCCCTATAGTCAATGTAAAATGGACAGTAGGGATTTCTTCTGATGTCATATTAAAGAGTATATCAGCACGAAAAGGAGAACTTCAGGCCCCAGAAACACCGGGTATCATAGCTAGGAAAGACGAACTTGAAGTTCAAGAAAAGGAAGAAAGGAGTACAGCAGCACAAAAAGGAAAACACCACACTCCAAATCATGATGTGATCAAAGGGAAAGGCGCAGATGAACATGAGCTTCAAGAAAATATTTCAAGGGAAGGTATAGGCAAACAAGATAATAGCAGGTAAGGATTCCTTTCCTTCTAACCAAAAAAAAAAGGGGTAAGGTGCATGGGCAATCCTTAAACTTGTAGGGGTGTAACTCCCAAAATGCATATTCAAATCTCAGAACTTGTCATAGTGTGTCATCTACGTCCCAAATTGTCACAGCCATTCAAGATCCTATGTGGTGTTGATGTGGCATTGCCACACGGATATGACATGGCATCATTTTGACTGACAAATTGGACCCATTTAAAAATTTTCCTTTTTCTTTTTTTCTTCTCTTCTTCTTCTCCTTCTCTTTTTTTTTCTTTCTTCTCCTTTCTCTGTAACCCGAGTAGAAGAAAGGAAAAAAAAGAAAAAAAAAAGAAGGAAAAAGAGAAAAGGACACATCACGTCCATGTGGCATGCCAAATCAGCACCACTTAGGATCCTAGAGGAGCTGTGTCGATTTAGGATCTAGATAATACACTTGAACAACTTATGGCACTTGAATATGCATTTTGAGAGTTTGGGAATCTAGATGACACAACCTACAAGTTTAAGGACCGCCTATGCACTTTACTTTAAAAAAAAAAAAAAGAACCTGACCTTCTACCTCACATTGCCTCTTCAGTGCTCCCTCCGGTCAAGACCATTTGACGTTGGGGGTTGACTAGAGGGATTATATCTGTCATTTGTTCAGATCAGCTTGATCGCGTTAACTTGGACTTGGTTCTCCCCCGCTTATTTGAGTTTAATCGACATTATAACAGGTGCCCAACGGATAATGTTCCCCTCAGGACTTTTAAGCCCTCGGAATCCTCTTCCGGTAAACAAAATGCTGGTAATGTTTCTCCCTCTCAAATTTCGCTAGTAATTTACGTGACCTCACTGTTCCAACAGTCATCTACCGCCTAGGCCATAGGCTATAGAGTTCAACACTCCAGTTGACAAGGAGAAGTCATATGAGCGTATTGTGTGCGCTCTGTAATTGCCCTTAATACGATAGCCTAAACATGTGATCACCTTAATTTAATGTGGACTTGAGGTGATTTAACTTTTTTTAAAAAAAAAACTCAAGCATTTATTTAAAGATCAAAGTTCAGAGACTAATACATGGGTGATTCATTATCTAAAAAAAACATGGGTGATTACAGTGCTAAGAGAACAGAAAACTGGAGTACAACCAGTTTTACAAACAAGCCTCTCAAGACTGGGAAAATTACACTTTATCATTTTGCAGAAAAGTACTTAACAATAATGAGAAAAAGCAATGTAATACCTTGATTTTCGTTTGTGTTTAAAACTTATTTCTGAATAAAATATAATTTTTAAAGTTGGAGCTTCATTTGGGTTTCATTTGAATATGCCATAATGACACAATGTTTTCATCCTAAAATTCCCTTCCAATTTTAAAACCACCCTTTCAAATTTTGACAAACTCCCTCTCAAATCTCTCTAATTTTAAAACTCTGATATTCCCAGGAAATTGTGAAATCTAACTATTCATTTGGGCCACCCCCTCCCGTTTTCCTAGCCGGCCCATAGGCCGCCGATTAACAGGCCATGCGACCTGGCCCATCTCTTCCCTCAGTGGGCCGATCCCAAGAAGATCTGAAGGGAATATTCCCTCCGAATATTCTCCTCAATTCTTTTATAAATATTTTCTCCTTTTTAGAAATATAATTAAAATTCTAAAATTCATATCTCTCAAACCATAACTCCATTCAACTTCGTTCAACTTCCAAAATTTTTCTAAAATGAGATCTACCTAGTGGCACTAATATTTATGCTATGTTATTTTCATTTTATTGCCTTTATGTTGATTTGCTCCTTTACGCACATAGTTCCCGAGTCCGAGGAAGATCCAGACACCGCATATGAGGAAGAAGAACCACTTCCGGAACAAGGCAAGTCATCTTTGACCATGTTGATTCCTACATGTGCAAAATATGTTGTTTGAGAAAGTGCATGCTTAGGTTACAATTTATTCTGTTTGGCCTCGGATTGCAAGTGTAACCGACATACCCACCTACTAGTAGCACTTACTTTTCTCTAGGATGTTGATTTCCCTTACCTTTGATAGCCCCACATATGATGCACCGGTGTCATTATCTTCTAGATACGACTACCGAGGTAGATTGGTTTAGCCCTGCTGCGATTGTACTGTCATATGGGAAACATGGACTTTTACTCAATTATTTCAAGTATCGGTATGTTTGGGAAATAAAACCAGTTTGTAAAATTTGATGATACGAATCCAGTGCCTATGTGGCTTGGCTATGTATTAAGGACTGTTTCCTTTGGGGATTCCATCCGAACATCCTACAATGTGACCATACAGGTACTATGGGGTATCCCTGGCTAAGTAACTAGTTAACCTAGGGAAGTTTAGTACCAATAGGAGTGGACTCATCTGAGTGGTAGCTCATGAGTCCAGTGTGAACGACAGTGGTAGCTGGTCCTAAGCATCTGTTCTTCATGGACCCTTGTAGAGGCATTAGACAACCCTATGTTAGCTTTTTAAAGGCTTTATCATGAACCTCCTATTGTCAGCTGTGTTTGATCATCACGGGTTAGGTAATCGGAGTTAACTCTTGTCGTGTGGGTAAAGCGTGCAACCTATGCAAAGTTTAGCTAAACTGTTCGAACAGTCGTGCTATTCGTCAAGGGCGAATGTACGGTGATTCTCATAGTGTAATTTTGTTCGCTTGTGCTTTGTGAACTTGATTTGTGGGAAACATATATCTGTGATTAAAATTGAGTTACATTTTAGAATTGTGACTAAAAATATATCTGTGATTCTCATACGTATATCCAAAGCTATATACGTATGACACATCATATGCATATAAAACATAGTTCAAATATGTTTGAAAAACATATTGTGGGCGGGACATCCAGAAGTTGACACATCATATCTGTGAATCTTTTGTTTGATTCTCATATGTGGGCAGGACATCCAGAAGTTGGCAAACATGGAAGTAGACTGCCTGAAGCAGAATCATGCCATGAGGCTGAATGGGTAG
More
|
||||||||||
| CDS seq | ATGCACCTACAAAATTCCATACCCTCAAGTCTAGGTACCAATTCTACTGCTGAAGGGATGAATGAACTTCTAAGCCTTATCTACAATATTCTTCCACATGATTTGAAAACATGCTTGCTACATTTTAACATGTATCCTGAGGACTACACGATCAGGAAGGATGATTTGGTGAAGCAATGGGTAGCTGAAGGGTTTGTCCATGAAGTAAATGGGCAAGACGCGGACGTTGTTGCTAAAATATATTTTGATGAACTTATCATTAGAGGATTGATCCAACCAGTAGATATCAATTATAACAATGAGGTGCTGTCATGTACAGTTCATCACATCGTGTTGGATTTTATTAGGTACAAATCCAAGGAGGAGAATTTCATTACTATTATGGACTATTTCCAAGCAAGACCTGGAAATCTGGACAAAGTTCGTCGATTGTCCATGCAGTTTGGAAGTGTGAAAGGTGCAAAGATATCGGCGGGAAGCATCAGAATGAGCCAAATTCGGTCACTTGTATATTTCGGATTCTTCAAATGTGTACCTTCCGTTACAGAGTATGCTCTACTGCGAGTTCTGATTCTTCATGTTTGGGCAGATAAAGACAAGATATGTTTTGACCTCTCTAGCATTCAGGAACTATTTCGACTGAGATATCTGAAGGTTGCATGTAATGTAGGTGTCAAGTTTCCATCCAAGATTAGACGATTACAATACTTGGAGACGCTGGATTTAGATGCAAGAGTGGTTGGTTTTCCATTAGATATCGTTCAATTGCAGAATTTATTGCATGTCCGCCTTCCACGTGAGACTAATATGCCCAATGGGATTGACAAGATGACATCACTTCGCAGTTTAGCGTATCTTCAGCTCTCTGATAGCTCAAGAGACAATGTGTTGAGACTTGGCAAGCTGACCAATTTACAGGATCTCCATCTAACCTGTTCTGGAATAGTACAAACTGACCGTGTGGTTGTTAACTTGAAAAGTCTTGGGTCTATCATGGAAAAACTCAGAAAACTGAAATCTCTAATTCTAGATGGTGGTGCTTCAACCACGAGCATCCCCTGTGATGATTTGAGCATATTGTCCTATCCGCCACCCAATCTTCAGAAGCTTGAGTTGTCGCCACAATTCTTTATCTTTCCCAGCCTCCCTGAGTGGATTGGAAAACTTAGCAAACTGTGCAATCTAAAGATTGCAGTCAGGGACTTACCAAGGAATAACATTGACATTATTAAAAGATTGACTACTCTTACTGTTCTCTCGCTCTCTGTGCGGACCACCCCTGCAGACCGGATTGTTTTTGACAAAGGATTCCATGGAATCAGGTACTTCAAGTTCACGTCTACTGCACCATGTTTGTCCTTTGCGGAAGGAGCGATGGTTAATGTTGTAAGGCTTAAGTTAGTTTTCAATGCCAGTAGCATAGAGGAATATGACCTTACATCTGTTTGCTTCCAGTATTTAACTTCCCTTAAAGATATCTCTGTAAAATTTGGAGACACCAGTTCTTATTTGCCAAGCGGAAGGAATGCAGCAGAGAGTGCACTGGTCGCTGCGGACATCCAGAAGTTGGCAAACATGGAAGTAGACTGCCTGAAGCAGAATCATGCCATGAGGCTGAATGGGTAG
More
|
||||||||||
| Protein seq | MHLQNSIPSSLGTNSTAEGMNELLSLIYNILPHDLKTCLLHFNMYPEDYTIRKDDLVKQWVAEGFVHEVNGQDADVVAKIYFDELIIRGLIQPVDINYNNEVLSCTVHHIVLDFIRYKSKEENFITIMDYFQARPGNLDKVRRLSMQFGSVKGAKISAGSIRMSQIRSLVYFGFFKCVPSVTEYALLRVLILHVWADKDKICFDLSSIQELFRLRYLKVACNVGVKFPSKIRRLQYLETLDLDARVVGFPLDIVQLQNLLHVRLPRETNMPNGIDKMTSLRSLAYLQLSDSSRDNVLRLGKLTNLQDLHLTCSGIVQTDRVVVNLKSLGSIMEKLRKLKSLILDGGASTTSIPCDDLSILSYPPPNLQKLELSPQFFIFPSLPEWIGKLSKLCNLKIAVRDLPRNNIDIIKRLTTLTVLSLSVRTTPADRIVFDKGFHGIRYFKFTSTAPCLSFAEGAMVNVVRLKLVFNASSIEEYDLTSVCFQYLTSLKDISVKFGDTSSYLPSGRNAAESALVAADIQKLANMEVDCLKQNHAMRLNG |
||||||||||
| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G022860 | OsN22_11G022860_01 | Chr11 | 28930156 | 28934996 | + | NAM | ||
| CDS seq | ATGCACCTACAAAATTCCATACCCTCAAGTCTAGGTACCAATTCTACTGCTGAAGGGATGAATGAACTTCTAAGCCTTATCTACAATATTCTTCCACATGATTTGAAAACATGCTTGCTACATTTTAACATGTATCCTGAGGACTACACGATCAGGAAGGATGATTTGGTGAAGCAATGGGTAGCTGAAGGGTTTGTCCATGAAGTAAATGGGCAAGACGCGGACGTTGTTGCTAAAATATATTTTGATGAACTTATCATTAGAGGATTGATCCAACCAGTAGATATCAATTATAACAATGAGGTGCTGTCATGTACAGTTCATCACATCGTGTTGGATTTTATTAGGTACAAATCCAAGGAGGAGAATTTCATTACTATTATGGACTATTTCCAAGCAAGACCTGGAAATCTGGACAAAGTTCGTCGATTGTCCATGCAGTTTGGAAGTGTGAAAGGTGCAAAGATATCGGCGGGAAGCATCAGAATGAGCCAAATTCGGTCACTTGTATATTTCGGATTCTTCAAATGTGTACCTTCCGTTACAGAGTATGCTCTACTGCGAGTTCTGATTCTTCATGTTTGGGCAGATAAAGACAAGATATGTTTTGACCTCTCTAGCATTCAGGAACTATTTCGACTGAGATATCTGAAGGTTGCATGTAATGTAGGTGTCAAGTTTCCATCCAAGATTAGACGATTACAATACTTGGAGACGCTGGATTTAGATGCAAGAGTGGTTGGTTTTCCATTAGATATCGTTCAATTGCAGAATTTATTGCATGTCCGCCTTCCACGTGAGACTAATATGCCCAATGGGATTGACAAGATGACATCACTTCGCAGTTTAGCGTATCTTCAGCTCTCTGATAGCTCAAGAGACAATGTGTTGAGACTTGGCAAGCTGACCAATTTACAGGATCTCCATCTAACCTGTTCTGGAATAGTACAAACTGACCGTGTGGTTGTTAACTTGAAAAGTCTTGGGTCTATCATGGAAAAACTCAGAAAACTGAAATCTCTAATTCTAGATGGTGGTGCTTCAACCACGAGCATCCCCTGTGATGATTTGAGCATATTGTCCTATCCGCCACCCAATCTTCAGAAGCTTGAGTTGTCGCCACAATTCTTTATCTTTCCCAGCCTCCCTGAGTGGATTGGAAAACTTAGCAAACTGTGCAATCTAAAGATTGCAGTCAGGGACTTACCAAGGAATAACATTGACATTATTAAAAGATTGACTACTCTTACTGTTCTCTCGCTCTCTGTGCGGACCACCCCTGCAGACCGGATTGTTTTTGACAAAGGATTCCATGGAATCAGGTACTTCAAGTTCACGTCTACTGCACCATGTTTGTCCTTTGCGGAAGGAGCGATGGTTAATGTTGTAAGGCTTAAGTTAGTTTTCAATGCCAGTAGCATAGAGGAATATGACCTTACATCTGTTTGCTTCCAGTATTTAACTTCCCTTAAAGATATCTCTGTAAAATTTGGAGACACCAGTTCTTATTTGCCAAGCGGAAGGAATGCAGCAGAGAGTGCACTGGTCGCTGCGGACATCCAGAAGTTGGCAAACATGGAAGTAGACTGCCTGAAGCAGAATCATGCCATGAGGCTGAATGGGTAG
More
|
|||||||
| Protein seq | MHLQNSIPSSLGTNSTAEGMNELLSLIYNILPHDLKTCLLHFNMYPEDYTIRKDDLVKQWVAEGFVHEVNGQDADVVAKIYFDELIIRGLIQPVDINYNNEVLSCTVHHIVLDFIRYKSKEENFITIMDYFQARPGNLDKVRRLSMQFGSVKGAKISAGSIRMSQIRSLVYFGFFKCVPSVTEYALLRVLILHVWADKDKICFDLSSIQELFRLRYLKVACNVGVKFPSKIRRLQYLETLDLDARVVGFPLDIVQLQNLLHVRLPRETNMPNGIDKMTSLRSLAYLQLSDSSRDNVLRLGKLTNLQDLHLTCSGIVQTDRVVVNLKSLGSIMEKLRKLKSLILDGGASTTSIPCDDLSILSYPPPNLQKLELSPQFFIFPSLPEWIGKLSKLCNLKIAVRDLPRNNIDIIKRLTTLTVLSLSVRTTPADRIVFDKGFHGIRYFKFTSTAPCLSFAEGAMVNVVRLKLVFNASSIEEYDLTSVCFQYLTSLKDISVKFGDTSSYLPSGRNAAESALVAADIQKLANMEVDCLKQNHAMRLNG
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0462900 | SBH | 0.000000 | 0.000000 | 0.358571 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g41170 | SBH | 0.472281 | 0.314193 | 0.331847 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0462900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024250 | SBH | 0.858141 | 0.000000 | 1.780773 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023050 | RBH | 0.350881 | 2.159900 | 2.415120 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023890 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023680 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0018900 | SBH | 4.652048 | 5.587349 | 14.969735 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0401100 | RBH | 0 | 0 | 0.00518 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024450 | SBH | 0.156799 | 0.040792 | 0.934761 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0421400 | RBH | 1.5230995 | 6.917459 | 5.3415235 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023160 | RBH | 0.267412 | 0.215590 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024000 | RBH | 1.287633 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023740 | SBH | 2.832259 | 19.498186 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022610 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024090 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023290 | RBH | 0.0 | 0.0 | 0.0 |
