Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G000540 | OGI:12000980 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:387820-394764 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ACCCAACACAGAAAATATCACTGCTCGCACCACACACCCGGGCGGCATGGCGGCGACCTCGCCGCCGATGACGTCTGTCGCCGCCGCCGCGCTTGTCCTAACCCCTTCTCCAGCTCTCAACCGTATATCCTTTCCCTTCTCCCGTCGTCACTGCCGTAGTGCTGCTCCTCCTCCTCGGTGGAGGCCCACGCGGTGCCGCGGGAAGCCCGGTGTCACGGAAGTTGTAGCCGAGAAGGAGACTTCGCCGGATGGCGAAGAGGAGGAGGTGCGCGGGCGCGGATGGTTCATGGTTGATGAGATTGGTATGGACATCCTCACCATCGCCTTGCCTGCTGTGCTCGCCCTCGCCGCCAACCCCATCACGGCTCTCGTCGACACCGCCTTCGTTGGCCATGTCGGTAAGGATCTTGCTTCCTCACTTGTATCTTTTCTTTTACTTCTTTCTACATTTCCTTTGTGGAGTGTAATCCCAATTGCTTGGGTAACTTCTTGTGGAAATGAAATAGGCAAACTGGGTTGGCACTCTTGATAAATAGGGGAAATTATCCTTTCTATATTAACCATTTCCTATAAGAAAAATGTTTCCGTTACTTTGAGAAATGGAAACTAATGAGTGAAGGACTTGTGTGTACTTTGGATGATCGGTATGATGAGTTCGAATTGCGGATGTTTTACAAGAGGAGTACACATGCTTGTATCTGTTTTTTCTCTGTTATATGTTGTGAAGAAACTTATTTCTTACAAGCTTACTCGCTACAGAAATGTTGGTCATAATCTTTATTCAGTTGACGGGCTTCAATTCATTCATCAGGTTCGACTGAACTTGCTGCCGTTGGAGTATCCATTTCTATCTTCAATCTGGTATGCAAGCTGCTCAATGTGCCATTGCTCAATGTCACCACATCCTTTGTTGCCGAGCAGCAGGCAGTGGATGCAGCTGAAAGTAAGCAATTCGCAGGTCTTATTTTCTTTGTTATAAAACTTAAAGCCATCTTGCTTGTTTGCATAACACTGATTAGTTTTTAGTCCTCGCATAGGAAATGAAATTTCAATACCCCAAGAGAAAGCAAGTAAACAAAGGAGGTTTCTTCCAGCGGTCTCAACATCCTTGGCTCTAGCTGCTGGCATAGGATTGATGGAAATGGTGGCACTGATACTTGGGTCTGGGACACTAATGGACATCGTTGGTATACCTGTCGTACGTAAGACTAATTTATTTCTATTAGTAGATGTCTGAGATTTATCTCTTCTCTGAAATATGGTGCTAGTGGTGGGTTTTTCTCTTGTTAGGGTGTGTCATGGTTGTGGATATCTAGAGTTTAAATCCTGTGTAGAGTTGACAGCTAGGTGAGTCAGGTGTTACATTTTGTGTTCCATTTGTCTGTCTGGGTATTCATCTTGATGTATATACACATACTTCAAAATTGTTTTCAGACCTATTCTATGTGCTTCATTAGTCAAGTTTTCAACAGATAATAAAGGATCAAAACAACATAGTGTTTGATCAACACATGAAGACGAAACCAAACTAGAACTATATTATACCAATATTTGGACAATGTTATATTCTAAGCTTGATTGATTCGTATTATTTATTTATTGAGATTGGCATAGTACAGAGCACAAAACAAATTACCTGATGGGCCCTTAAAACTTACTACCCTAAAAAAGGAGTTATGGTAGGCATTAGCCAATTAACAAAATTTGGGGGACAAAATTTAGTACACTTAACACCTGCTCTCATTTTGTTTATTATTCATTTCAAACTTTCTGAGCTTAATGCTATGTAACCTTGGAATTACACTAAATAATTCTATATTACAAATCCAATAAGTTCTTAAATCAATGGCTTCAATATAAATTCTCCGAACAACCTTATACAGGATTCAGCGATGCGTGTACCTGCAGAGCAATTTCTTACTTTAAGGGCATATGGTGCACCTCCAGTCATAGTAGCACTTGCAGCACAAGGTGCTTTTCGTGGATTCATGGATACAAAGACACCGTTGTTTGCCGTGGGTAAGATAATTTATGCAAACTATTAGAGCATGTTTTCTGAAATCCTGTCTGATGCATACGATCTGCTATAGTGATTGCAAGTGTAGATATACATATTTTTGTTGTTACCATTTGTCATCTTTTTTTAAAGCAATAGACATATTTGACTTCAAATGATAAGAAACTAATAGTATGATGAATACAGGTGTTGGTAGCCTAGTGAATGCATTGCTGGATGCCATATTTATTTTTCCACTTGGTCTAGGTGTAAGTGGTGCTGCATTGGCAACTGTGACTTCAGAGTATGTTGAACTCATCATAAGACTTTACAGAAAATTGTCTTTTCTTTCATTTGGAGCCTCTTCACTTCTTTCTTTAATCAGTATTCATAAGCCCCTAAAGGCCTAAACTATCTGCATAATTTTACATGTATTCAGGTACTTGACAGCATTTATCCTCCTTTGGAAGCTGAACAACAAAATTGTTCTGCTCTCATGGAATATCATTGGTGGAGACGTTGTCCGCTACCTAAAATCAGGTTGTCCAACATCCCTCATGTTCATTTGCAAATACATTACAAATGATGGTTTTGTTTTCTTGTAAGAGAGCTTTGATATACAATGAACCGATAAAAAACTATCAATCAATTCAACTCCCTTTTTTTTTTAAGGCAGATCAAATTTCATTGACCTGGCTTTGCAAGAAAGCCTAAGCAACAAACAGAGTCTTATACAGAAAGGGAAAAAGCAAAAACAATTCAACTCCATTTAGTACTACCTCTATTAAACAAGTTTCATCTTGCTGCAATATACCTCTATGTTAACCCCTTTCACATGAATCATTCTCTAGGTGCACTGCTAATTGCAAGAACCATTGCGGTAGTCCTGACATTCACACTGTCGACATCCCTGGCAGCCAGGGAAGGGTCTGTTCCAATGGCTGGATATGAGATATGTTTGCAAGTGTGGTTAACAATCTCTCTGCTCAATGATGCACTAGCTCTTGCTGGTCAGGTGTGTACATTTAGAGGATCATACCTTTAGTTTCTAGGCTCTAATATTTTACATTGGCCTGTAAAGTATTCATGATACAATGCAGGCTCTACTCGCAAGTGAATACGCAAAAGGAAACTACAAGAAGGCCCGCGTTGTCTTATACAGAGTTCTCCAGGTATGAAGACATTATATAATATTATGTTAGCAAATTCGTGACTATCCTCTTCTTTTTACTCTTGCAATAAGATTCTCACACTGTTTTATATGTAGATTGGAGGCATAACTGGTGTAGCACTTGCTACAATCTTGTTCCTTGGGTTTGGATATTTGTCCTTGCTGTTTACAGATGATCCAGCAGTTTTAGATGTTGCCCAAACTGGAGTCTGGGTAATGACTATCCTGAGAGGTCAAACTTGATTTATCAAGTGTTATGCAATGATTTTTATAATAATGGCTGATGAATATTTGCAGTTTGTCACTGTTTCTCAACCGATAAATGCTGTTGCTTTTGTGGCCGATGGGCTCTACTGTGGTGTTTCTGACTTTGCTTTCGCGGCGTACTCTACAGTTCAGATTTCTATTCTTGTCATATTCCATTGCATTGTTGTCAGTTCTAGCTGCAGCATCCTAATCACATAAATATTTTTTCTGTTTCAGTTATTTGCTGGAGCTGTCTCATCCGCAGTACTGCTTGTGGCCGCTCCTAAGTTTGGTCTTGGTGGAATCTGGGCTGGCCTTGCTCTATTTATGAGTTTGCGAGCAATTGCTGGTCTGTGGAGGTAGTAATGGATGATTTGCTTTGGGTGTAGGCCAATTATGTTAGAAAAACTAATTTGTTGATTTGAGTGATTTTGTGGTTTTCAGGTTAGGGAGCAAAGGTGGACCATGGAAAATAATCTGGTCTGAAACTGAGTAAACAAAAAAGATAGTTATGTGTACTCAATTATTCGACTAATTTCTTACAGTCAACATCTAAAGGCAAGTACAGAACGGCAAGCAAGAAAGCAGATAGCTGGTAGTCATTGTCCAGGACAAGATTTTCTTTAGGAGATGACAGGGTAGCTCATGTGGTGATTTGGTTACAACTTACAAGTAGATATACTTGCTGCTGCCTCTAGATAGATAGATATAGATAGATAGATAGATAGATCTCTTTGGTGTTGACTGGTATAGGAAGTTGATTCGACTTGTACAGTGCTGTGTTATAGTAGAATGGATACCCTGTCAGTATACAAGAAAGCTGAAAGCTCATAGATACAAACACATTCAGAGCCATCCGTCCATGTAAATAAGTGAATCTTTTCCTTGGGAGAAGCATATATAAGTGAATTCTTCCTCTCTGTTTATATTTCTTGGAATGATGTTTATGTACTGGGGATTTTGCCAAGGATCGGCAGCATGAACATATATATTGCGTACCTTGCCCCAGGCAGACCACAAAGATACACAGCATGAACAGGAAAGCTATGGGCCTATCGTATCTGGAGGCCCAATAAGCTCCAAGGATAGAGCCGGAGTGGGAGGCAGGGCAGCAGAGGCGCAGCCGAGCAGAAAGAACATCAGGAAGGAGAGGCTGAGGCCTGAGGGAGACGACGACGAGGGAATCAAGGGATTCGGAATCGGAATCGGAGAAGGAAAGATGCCTTGCCTCAACGTGTCCACCAACGTGAACCTCGACGGAGTGGACACCTCCGCCGTCCTCGCCGACGCATCCAAGACCGTCGCCACCATCATCGGCAAGCCCGAGGCCGTACGTTCATCCCTTTTCCTCTTCTTCTCTACCCATACCCACCCTAGGTTTAGGCGTGCCTCTCCTGGTTTCTTCATAAATTTTCGCTTCTTGTAGGCGTGCTCAGTTCCTAGCTTGCGATTATCTCTATTAACCTGGCGTTTTTAGTGGATTATCGCTCGCTTGTCTGGTGATTCAGTCTGCTCGAGCATGATTATTAGGGTTTAAGTAATAAGTACCCCCATCGGTCTTCGGCATGCAACTGATGTAATTGGGATTTTGATCCGTAGTTTAGTATCAACTATGGTGATGTTCATTTGGGGATACAACCTTAATAGGACGAGGGACAGGGAGGGAGACTGGTTGAGGGGATAGACAAGTTCCCTATTCTTCTTGGATTTCCTTCACAATTCACATACTTTGTATTACTGGTGCCTGAGTAAACCATTATCGCTCAAAATAAATAGTAAACCATTTACTCTATGAAATCTATGAACTTGCAGTATTCCTAAGCTTCATTTGGAATAGTAAATCTTCGCTTCATTTCGAGTTTGGCTGCAAAAATAGTAAACCATTTGGAATACAAACTTGGTACTTTTGCAGCCAAAATTTATAAACTTGCCTTTTCTTTTCAACATCAAATCCTCACCTTTTGGATTTTTCAGCAAGTAATAAATATTTGCAAAAATAGTATGCCAAGTCTGTTCATTTGGCTGAAAAAAATACAAAGTTTAACAACATTTGGAATAGTAAATCTTCGCTTCATTTCGAGTATGCCTAGGCTGCCAAAATTTATAAACTTGCTTTTCTTTCCACATCAAATCCTTCCTCTTTTGGATTTTTTAGCAAAAAATTTTAAAAAAGACTGTTGCGCATACTTTCAATGTAATACATCAGACTATCTGATATCTTTTTCCTGGACTGTTGCTTGTTATGATCGTCATATTGAAAGATGAAATGGACGAACAATTTTCATAACAGAAATTGGATGAAACAGAACTAATATAGCATTCCTACAATAAAAGTAATGTTCAGTTAGTCTAAACTAAAATGCTTATAAGCCATGACTTTTTCAACCACTTACTGAAAATTTTACTTTTTCCAAGAGTAGATCGATTTCATGTTTTTCATTCTAAATAAGTGTTCTTCTGAAAGCTGTCTATTACTAGCGAATAGTTCTTAGAGTGATACTTGATGCTGTATCAGAAATAGCTATATTGTTACTAGTGACCAGATAGAGGTAAGATCTGTTGTTAGTGGACCAAATGCGACTGCAGAAATGGCTAGTTTTGCTGTTAATGGACTTTCTTTTACTTGAAATCAACATTGGTTCTCTGATTATAATCTGTGAATCATGATACTCAATCCGTCCCGATTGAAATGCTATTCGTTGCACCATATTGCTATATAGATTTCAGAATTCTATGATTGCACAATGTTAGACCTGTGCTAGCGACAAACTGAAAGTTGACTTCCATCAATTTTCTGGTCTTAGCGTATGCTGAAGCTATTTTGCATCGCCTTTATTGTTTAGATACTAATTAGATTGCTTAATGCTTATTCCTCCCACAGTATGTGATGGTTGTTCTCAAGGGTTCAGTGCCTATGGCATTTGGAGGTACCCAGGAGCCTGCCGCTTATGGCGAGCTGGTTTCCATTGGTGGGCTGAACCCTGATGTCAACAAGAAGTTGAGTGCTGGCATTGCCTCTATCCTGGAGTCAAAGCTATCCATTCCCAAGGGCCGCTTCTACCTCAAGTTCTACGATTCCAAGGTAAGCAGGCCACATTTCTTATTGACTGTTCATCCATGGGTCTTCATAACCATATAGTCATGTTCTCATTGCATCTTTGCTGTTTGTTAGGCCCATCGTGCACAAGAACATGCTCAATGTTTGCATGCTTTGCATCAAGAATAGATCAGTGTAAATGGGTCGTCTGTTGCTTGTTTAATGTCATCGTATTGGTTTTTGCAGTTTAGTTTCTCTCTGCAGTTTGGCAGTAAACCCTTGCCACAGCACGTATACTCTTCCATGCTAATTATGAGCAACTGAGCACTAATAAACCCCTTTTGATTTTCTTTTTATGTAGCGCTCGGACTTTGGATGGAACGGCACCACCTTTTAGGTTAAACTGTATGCCTGTGGCTTCAAGATGCATGAAACCTAAGAATTCCTAATATCTTGTTCATTGCCTATTGGAGGACAATGCAGTCGATGTATCAG
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| CDS seq | ATGGCGGCGACCTCGCCGCCGATGACGTCTGTCGCCGCCGCCGCGCTTGTCCTAACCCCTTCTCCAGCTCTCAACCGTATATCCTTTCCCTTCTCCCGTCGTCACTGCCGTAGTGCTGCTCCTCCTCCTCGGTGGAGGCCCACGCGGTGCCGCGGGAAGCCCGGTGTCACGGAAGTTGTAGCCGAGAAGGAGACTTCGCCGGATGGCGAAGAGGAGGAGGTGCGCGGGCGCGGATGGTTCATGGTTGATGAGATTGGTATGGACATCCTCACCATCGCCTTGCCTGCTGTGCTCGCCCTCGCCGCCAACCCCATCACGGCTCTCGTCGACACCGCCTTCGTTGGCCATGTCGGTTCGACTGAACTTGCTGCCGTTGGAGTATCCATTTCTATCTTCAATCTGGTATGCAAGCTGCTCAATGTGCCATTGCTCAATGTCACCACATCCTTTGTTGCCGAGCAGCAGGCAGTGGATGCAGCTGAAAGAAATGAAATTTCAATACCCCAAGAGAAAGCAAGTAAACAAAGGAGGTTTCTTCCAGCGGTCTCAACATCCTTGGCTCTAGCTGCTGGCATAGGATTGATGGAAATGGTGGCACTGATACTTGGGTCTGGGACACTAATGGACATCGTTGGTATACCTGTCGATTCAGCGATGCGTGTACCTGCAGAGCAATTTCTTACTTTAAGGGCATATGGTGCACCTCCAGTCATAGTAGCACTTGCAGCACAAGGTGCTTTTCGTGGATTCATGGATACAAAGACACCGTTGTTTGCCGTGGGTGTTGGTAGCCTAGTGAATGCATTGCTGGATGCCATATTTATTTTTCCACTTGGTCTAGGTGTAAGTGGTGCTGCATTGGCAACTGTGACTTCAGAGTACTTGACAGCATTTATCCTCCTTTGGAAGCTGAACAACAAAATTGTTCTGCTCTCATGGAATATCATTGGTGGAGACGTTGTCCGCTACCTAAAATCAGGTGCACTGCTAATTGCAAGAACCATTGCGGTAGTCCTGACATTCACACTGTCGACATCCCTGGCAGCCAGGGAAGGGTCTGTTCCAATGGCTGGATATGAGATATGTTTGCAAGTGTGGTTAACAATCTCTCTGCTCAATGATGCACTAGCTCTTGCTGGTCAGGCTCTACTCGCAAGTGAATACGCAAAAGGAAACTACAAGAAGGCCCGCGTTGTCTTATACAGAGTTCTCCAGATTGGAGGCATAACTGGTGTAGCACTTGCTACAATCTTGTTCCTTGGGTTTGGATATTTGTCCTTGCTGTTTACAGATGATCCAGCAGTTTTAGATGTTGCCCAAACTGGAGTCTGGTTTGTCACTGTTTCTCAACCGATAAATGCTGTTGCTTTTGTGGCCGATGGGCTCTACTGTGGTGTTTCTGACTTTGCTTTCGCGGCGTACTCTACATTATTTGCTGGAGCTGTCTCATCCGCAGTACTGCTTGTGGCCGCTCCTAAGTTTGGTCTTGGTGGAATCTGGGCTGGCCTTGCTCTATTTATGAGTTTGCGAGCAATTGCTGGTCTGTGGAGGTTAGGGAGCAAAGACCACAAAGATACACAGCATGAACAGGAAAGCTATGGGCCTATCGTATCTGGAGGCCCAATAAGCTCCAAGGATAGAGCCGGAGTGGGAGGCAGGGCAGCAGAGGCGCAGCCGAGCAGAAAGAACATCAGGAAGGAGAGGCTGAGGCCTGAGGGAGACGACGACGAGGGAATCAAGGGATTCGGAATCGGAATCGGAGAAGGAAAGATGCCTTGCCTCAACGTGTCCACCAACGTGAACCTCGACGGAGTGGACACCTCCGCCGTCCTCGCCGACGCATCCAAGACCGTCGCCACCATCATCGGCAAGCCCGAGGCCTATGTGATGGTTGTTCTCAAGGGTTCAGTGCCTATGGCATTTGGAGGTACCCAGGAGCCTGCCGCTTATGGCGAGCTGGTTTCCATTGGTGGGCTGAACCCTGATGTCAACAAGAAGTTGAGTGCTGGCATTGCCTCTATCCTGGAGTCAAAGCTATCCATTCCCAAGGGCCGCTTCTACCTCAAGTTCTACGATTCCAAGCGCTCGGACTTTGGATGGAACGGCACCACCTTTTAG
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| Protein seq | MAATSPPMTSVAAAALVLTPSPALNRISFPFSRRHCRSAAPPPRWRPTRCRGKPGVTEVVAEKETSPDGEEEEVRGRGWFMVDEIGMDILTIALPAVLALAANPITALVDTAFVGHVGSTELAAVGVSISIFNLVCKLLNVPLLNVTTSFVAEQQAVDAAERNEISIPQEKASKQRRFLPAVSTSLALAAGIGLMEMVALILGSGTLMDIVGIPVDSAMRVPAEQFLTLRAYGAPPVIVALAAQGAFRGFMDTKTPLFAVGVGSLVNALLDAIFIFPLGLGVSGAALATVTSEYLTAFILLWKLNNKIVLLSWNIIGGDVVRYLKSGALLIARTIAVVLTFTLSTSLAAREGSVPMAGYEICLQVWLTISLLNDALALAGQALLASEYAKGNYKKARVVLYRVLQIGGITGVALATILFLGFGYLSLLFTDDPAVLDVAQTGVWFVTVSQPINAVAFVADGLYCGVSDFAFAAYSTLFAGAVSSAVLLVAAPKFGLGGIWAGLALFMSLRAIAGLWRLGSKDHKDTQHEQESYGPIVSGGPISSKDRAGVGGRAAEAQPSRKNIRKERLRPEGDDDEGIKGFGIGIGEGKMPCLNVSTNVNLDGVDTSAVLADASKTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAYGELVSIGGLNPDVNKKLSAGIASILESKLSIPKGRFYLKFYDSKRSDFGWNGTTF |
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| Function | Protein DETOXIFICATION 44, chloroplastic [UniProtKB/Swiss-Prot:Q84K71] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G000540 | OsN22_11G000540_01 | Chr11 | 387850 | 394764 | + | NAM | ||
| CDS seq | ATGGCGGCGACCTCGCCGCCGATGACGTCTGTCGCCGCCGCCGCGCTTGTCCTAACCCCTTCTCCAGCTCTCAACCGTATATCCTTTCCCTTCTCCCGTCGTCACTGCCGTAGTGCTGCTCCTCCTCCTCGGTGGAGGCCCACGCGGTGCCGCGGGAAGCCCGGTGTCACGGAAGTTGTAGCCGAGAAGGAGACTTCGCCGGATGGCGAAGAGGAGGAGGTGCGCGGGCGCGGATGGTTCATGGTTGATGAGATTGGTATGGACATCCTCACCATCGCCTTGCCTGCTGTGCTCGCCCTCGCCGCCAACCCCATCACGGCTCTCGTCGACACCGCCTTCGTTGGCCATGTCGGTTCGACTGAACTTGCTGCCGTTGGAGTATCCATTTCTATCTTCAATCTGGTATGCAAGCTGCTCAATGTGCCATTGCTCAATGTCACCACATCCTTTGTTGCCGAGCAGCAGGCAGTGGATGCAGCTGAAAGAAATGAAATTTCAATACCCCAAGAGAAAGCAAGTAAACAAAGGAGGTTTCTTCCAGCGGTCTCAACATCCTTGGCTCTAGCTGCTGGCATAGGATTGATGGAAATGGTGGCACTGATACTTGGGTCTGGGACACTAATGGACATCGTTGGTATACCTGTCGATTCAGCGATGCGTGTACCTGCAGAGCAATTTCTTACTTTAAGGGCATATGGTGCACCTCCAGTCATAGTAGCACTTGCAGCACAAGGTGCTTTTCGTGGATTCATGGATACAAAGACACCGTTGTTTGCCGTGGGTGTTGGTAGCCTAGTGAATGCATTGCTGGATGCCATATTTATTTTTCCACTTGGTCTAGGTGTAAGTGGTGCTGCATTGGCAACTGTGACTTCAGAGTACTTGACAGCATTTATCCTCCTTTGGAAGCTGAACAACAAAATTGTTCTGCTCTCATGGAATATCATTGGTGGAGACGTTGTCCGCTACCTAAAATCAGGTGCACTGCTAATTGCAAGAACCATTGCGGTAGTCCTGACATTCACACTGTCGACATCCCTGGCAGCCAGGGAAGGGTCTGTTCCAATGGCTGGATATGAGATATGTTTGCAAGTGTGGTTAACAATCTCTCTGCTCAATGATGCACTAGCTCTTGCTGGTCAGGCTCTACTCGCAAGTGAATACGCAAAAGGAAACTACAAGAAGGCCCGCGTTGTCTTATACAGAGTTCTCCAGATTGGAGGCATAACTGGTGTAGCACTTGCTACAATCTTGTTCCTTGGGTTTGGATATTTGTCCTTGCTGTTTACAGATGATCCAGCAGTTTTAGATGTTGCCCAAACTGGAGTCTGGTTTGTCACTGTTTCTCAACCGATAAATGCTGTTGCTTTTGTGGCCGATGGGCTCTACTGTGGTGTTTCTGACTTTGCTTTCGCGGCGTACTCTACATTATTTGCTGGAGCTGTCTCATCCGCAGTACTGCTTGTGGCCGCTCCTAAGTTTGGTCTTGGTGGAATCTGGGCTGGCCTTGCTCTATTTATGAGTTTGCGAGCAATTGCTGGTCTGTGGAGGTTAGGGAGCAAAGACCACAAAGATACACAGCATGAACAGGAAAGCTATGGGCCTATCGTATCTGGAGGCCCAATAAGCTCCAAGGATAGAGCCGGAGTGGGAGGCAGGGCAGCAGAGGCGCAGCCGAGCAGAAAGAACATCAGGAAGGAGAGGCTGAGGCCTGAGGGAGACGACGACGAGGGAATCAAGGGATTCGGAATCGGAATCGGAGAAGGAAAGATGCCTTGCCTCAACGTGTCCACCAACGTGAACCTCGACGGAGTGGACACCTCCGCCGTCCTCGCCGACGCATCCAAGACCGTCGCCACCATCATCGGCAAGCCCGAGGCCTATGTGATGGTTGTTCTCAAGGGTTCAGTGCCTATGGCATTTGGAGGTACCCAGGAGCCTGCCGCTTATGGCGAGCTGGTTTCCATTGGTGGGCTGAACCCTGATGTCAACAAGAAGTTGAGTGCTGGCATTGCCTCTATCCTGGAGTCAAAGCTATCCATTCCCAAGGGCCGCTTCTACCTCAAGTTCTACGATTCCAAGCGCTCGGACTTTGGATGGAACGGCACCACCTTTTAG
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| Protein seq | MAATSPPMTSVAAAALVLTPSPALNRISFPFSRRHCRSAAPPPRWRPTRCRGKPGVTEVVAEKETSPDGEEEEVRGRGWFMVDEIGMDILTIALPAVLALAANPITALVDTAFVGHVGSTELAAVGVSISIFNLVCKLLNVPLLNVTTSFVAEQQAVDAAERNEISIPQEKASKQRRFLPAVSTSLALAAGIGLMEMVALILGSGTLMDIVGIPVDSAMRVPAEQFLTLRAYGAPPVIVALAAQGAFRGFMDTKTPLFAVGVGSLVNALLDAIFIFPLGLGVSGAALATVTSEYLTAFILLWKLNNKIVLLSWNIIGGDVVRYLKSGALLIARTIAVVLTFTLSTSLAAREGSVPMAGYEICLQVWLTISLLNDALALAGQALLASEYAKGNYKKARVVLYRVLQIGGITGVALATILFLGFGYLSLLFTDDPAVLDVAQTGVWFVTVSQPINAVAFVADGLYCGVSDFAFAAYSTLFAGAVSSAVLLVAAPKFGLGGIWAGLALFMSLRAIAGLWRLGSKDHKDTQHEQESYGPIVSGGPISSKDRAGVGGRAAEAQPSRKNIRKERLRPEGDDDEGIKGFGIGIGEGKMPCLNVSTNVNLDGVDTSAVLADASKTVATIIGKPEAYVMVVLKGSVPMAFGGTQEPAAYGELVSIGGLNPDVNKKLSAGIASILESKLSIPKGRFYLKFYDSKRSDFGWNGTTF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G000540 | OsN22_11G000540_02 | Chr11 | 387820 | 392159 | + | IsoSeq | ||
| CDS seq | ATGGCGAAGAGGAGGAGGTGCGCGGGCGCGGATGGTTCATGGTTGATGAGATTGGTATGGACATCCTCACCATCGCCTTGCCTGCTGTGCTCGCCCTCGCCGCCAACCCCATCACGGCTCTCGTCGACACCGCCTTCGTTGGCCATGTCGGTTCGACTGAACTTGCTGCCGTTGGAGTATCCATTTCTATCTTCAATCTGGTATGCAAGCTGCTCAATGTGCCATTGCTCAATGTCACCACATCCTTTGTTGCCGAGCAGCAGGCAGTGGATGCAGCTGAAATCCTCGCATAGG
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| Protein seq | MAKRRRCAGADGSWLMRLVWTSSPSPCLLCSPSPPTPSRLSSTPPSLAMSVRLNLLPLEYPFLSSIWYASCSMCHCSMSPHPLLPSSRQWMQLKSSHR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr11 | 388762 | 388857 | + | OsN22_11G000540_02 | OsN22_11G000540_01,OsN22_11G000540_02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.273106 | 0.000000 | 4.780027 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0107500 | RBH | 0.304073 | 0.886809 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g01680 | RBH | 0.259380 | 0.582791 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0107500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0000530 | RBH | 0.941818 | 1.247802 | 1.674738 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0000540 | RBH | 0.183002 | 0.285958 | 1.307900 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0000540 | RBH | 1.489320 | 1.050121 | 2.376724 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0000540 | RBH | 0.606735 | 0.073790 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0000520 | RBH | 9.965149 | 3.288811 | 3.437296 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0006200 | SBH | 3.6285175 | 2.73011 | 2.837749 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0000520 | RBH | 0.952387 | 0.762886 | 0.653226 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0006400 | RBH | 7.251355 | 4.003403 | 11.1398355 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0000390 | RBH | 0.306162 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0000520 | RBH | 0.686162 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0000530 | RBH | 9.425825 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0000530 | RBH | 0.776088 | 0.0 | 0.270894 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0000530 | RBH | 0.820543 | 1.393129 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G000430 | RBH | 0.000000 | 0.000000 | 1.364803 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0000530 | RBH | 3.925816 | 17.064875 | 13.411567 |
