Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsN22_10G015770 | OGI:10058900 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr10:20462272-20465723 | ||||||||
Gene Symbol | alphaGa1, alpha-Gal I | ||||||||||
DNA seq | CTAGGAGAAGTCGATGATGACGTCGAAGATCTCGGCCAGGGAGAGGAGGTTGGTGACGGTGTCCAGGGCCGAGAGGTACAACGCGTCGGAGTCGAAGACGTGGATGGGGAAGCTGTTAGAGAGGGAGACGTTGAAGTAGCGGGCGTTGATGGCGTTTAGGATGCGGAGGCGGTAGCGGCGGCGGTGGACGATGAGGAACGGCCAGGCCTTGCCGTTGACGGTGATACCCTCACCGAATAACTTTGGCTGCCATGGCGCTGGAACGGGGGAGGACGGCCAGAGCGGCGGCTCGTTGGGGACGGCCTCGCGGATGAGCAACGGCCGGAAGGACAACAGCGGCGGCGACAACGCGTCGGCCGGCCAACTCCCTCCTCGCCGCCTCCATCCCCACTTCCCTCCCGCTGTCGCCGTCTCCGTCTTCCGCTCCTCCCTCGCCCCGGATGGGAGTTTCGTCGGAGCGGCGTCCTCCTCCTCTACCTCACCACCGCCGTTCCCCTCCAGCTCCCCCTTCGCTCTACCCCTGTGGTCCTACCACCGACGCCCCTCCCCGCTTGCGTGCACCGACCTCGTCGACCAGGGTGACTTCAACGGGGCACGCCGCGACGCGACACCATGCTCGCCGCCGCCGACCTCGTCGAGCGGGGTGACTTCGACGGGGACAAGAGAGGCCATGGCGACGCCCGACCGTGGCGTGCTCCTCTGCACCGGCGACCGCGCCCGCCGAACCGTCCTGTCGCGCCGCCCTGGCTGCTCTTCGCCGGCCACCGCCCATGGAGAGGGAAGGAGAGAGGAAGTGAGTTGATGGGGAGGGTAAGAAGTGGTGACGTGGTCAGTCTGACACGCGGGTCCCATGCGGACTCAGCTGCCACGTCGGACAATACCAGGGTCAAAATCACCAAAGGACCTAAATTGAACGGTTTTGTAACTTGAGGGATGTCATATATCTGGTTTTGTGGTTGGGGGACGATTTTGTAACTCGATGACAAGTTGAGGGACCTTCGGTGCACTTTTTCTGTGAAAAAATTGTCCATTGCCAGGCCTCCTGGTCCTGATGGTTTTAATGGCCTTTTTGTTAAGTAGTATTGGCCCATAATTTGTCAGGACTATTTATAGGCTAGCTGCTGAGTTTCATTCGGGGCATCTTGCAGCGAGAGGTCGAAGTGGGCCTAGGCACGGTGTAGACTTCGAAGTCGTCGTCGACGAAGGCCACCATCTTCGTGAGGGTGGCGCCGATGGGCATGTCGCCGGCCAGAGGACGTCATCGAGGCCGTCGGGCGCCCGCCCTCCCCCCCGCAGCCGCCCAGCTCCTCCCCTACCGGCTGCCGCCCGCGCCCAGCTCCGCCCCGCCGGCCGAGCCCCGCTCCGCCCCCGACGGCCGCACCCAGCTCCTCCCCCGGCTCCCCTGGCTGGGAGGGCGGGCGCAGGAGGCCGTGCGGCGCTGCCGCCGCCTCGTCGCCCATCGCCCGTTGCTGGTCTCCCGCGCTCCCCCACCGGCCGGCTGCCCTGCATGGGGAGGGGAAGAAGGAGAGAGGAAGAGAGGGAGGGGGAAAAAGGGGCTGGCATGTGGGACCCACGTGGATCCCATGCTGAGTCAGCTGCCACGCTGGATAAAACCGGAGTCAAAACCGCCTAGGAGTCTAATTTGCACCGGTTTCATAAGTTGGAGGACGCGTTGTATCTGGTTTTACGGTTGGAGGACGATTTTGCAATTCGATGACAAGTTGAGGGACCTTGGGTATACTTTTTCCAATCAGATTCGCTCACTAGCTAATGGAGTCGAAGTGGATTTATTCCAAATCAAAATCTCTTCCAGACCAAATAACATGGGCACATCTAAGTCAGAGTCCCGTTCCGGCCCGACAGATATGGGCCCCTTGAATCACGGCCGTACTGACCAACGGACTGGATCCTTCCGACGCCGGTGGGCGGGGAGGCGGAGACGGCAGCCTCGTGGATATTAATTGTTTTGTTGAAGCAACAGATGCAGGTGATTTGGCTGGTGCATACCCAATCCGTAGTTGTAGCTGATAGTGTTTTGATCCACAATGTGTTTTGCATTCTGTCTAGTTGTGATGTCTTGCAATGTCTCAACTCTCTACTATGAAGGCTTTTGCCACAGATTTGTCTTCAGGCGAGTATATTTCTTTATAAGATAGTGGCAGGAATGCCGCTTTGTTGCTGCAACTTTCACAACAAACTTCAGCAATACACCGCATTTGACGGCACCTTAAATGCACAGGCTTACAGCTTATTTCTGCATATATATAACCAAATGGCATCCATTTCCATCTCTACCAATCCTTGCAAATCGCAAGAGAGAAATGTTATGAACTCTGAATTCTGAAGAGTGATGTTGTACTTTGAGCTCTGAAGAAAGCAAGTTTACCGCCCATAGATCACGAGCAGTGACAGCCACTGACCCAGTGAGTCCAATGCTCGACCAATGCGCAGTGATGGCCTGTTCCAGAGTACCACATCCTTCCTGTTGTTGCTGAGTGACCTGGCCCAAACCTATCGACAAATTAACACAGTATTGCCAGCTTCAGAGCATGGAACAAAGACAAGGCTGAAACTTGAAAACCACTGATGCAGATGAACAGGGATTACCTCCAATCCATTGTCAGCTTGCATTTTCTTTCCTTGGACACCTAGTCTGTCTGCACAAAGTTGTTATATGAGTATGGTGAAATATCAAAGAATATGGCTAGATCTAAGCATGTGAAAGAGAAGGCTTGCCTTGGTTCACAGCGATGACCTCCCAGTTGCTGAGTATGTCTTTCATCTGCTGGCTCGGGCCTGTTTAGTTTCCAAAAAGAAAATTTTTAGGTGTCACATCGGATGTTTGACCGGATGTCGGAAGGGTTTTTCGGACACGAATGAAAAAAATAATTTCATAACTCGTCTGGAAACCGCGAGACGAATCTTTTGAGCCTAATTAATCCGTCATTAGCACATGTGGATTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTGAAAAGATTCGTCTCGTGATTTCCTCTCTAACTGTGCAATTAGTTTTTTCATTTATCTATATTTAATGCTTCATGCATGTGTCCAAAGATTCGATGTGATGTTTTTGGGAAACTAAACAGGGCCACATTGAGCGCACATCACATCCAATCAAAAGAGGAGCCTGAACAGTTAAAGCAAAGCTTGCTGTGAGGAAATGCAACAAAAGAAAATATTCAACATTGCAGCAAAACTGTTAGTACACAAAACATGCTATGGTACCTATGATAGTGCCCACAGATACTGAACTGTGAGCGGTACTCCGATTAAGACATCTCCCCATCGCCCACTTCAAGCATGCCAGGATCTGCAATTGATGTTCAACAGCATCTGTTGATCGGGTCGAAGCTCTCAAGTGGTTGAGCAGAACACATTCATCTCAAATTCTTACCGTTCCATCCACCAGGTCCAGCAT
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CDS seq | ATGCTGGACCTGGTGGATGGAACGATCCTGGCATGCTTGAAGTGGGCGATGGGGAGATGTCTTAATCGGAGTACCGCTCACAGTTCAGTATCTGTGGGCACTATCATAGACAGACTAGGTGTCCAAGGAAAGAAAATGCAAGCTGACAATGGATTGGAGGTTTGGGCCAGGTCACTCAGCAACAACAGGAAGGATGTGGTACTCTGGAACAGGCCATCACTGCGCATTGGTCGAGCATTGGACTCACTGGGTCAGTGGCTGTCACTGCTCGACCACAGGGGTAGAGCGAAGGGGGAGCTGGAGGGGAACGGCGGTGGTGAGGTAGAGGAGGAGGACGCCGCTCCGACGAAACTCCCATCCGGGGCGAGGGAGGAGCGGAAGACGGAGACGGCGACAGCGGGAGGGAAGTGGGGATGGAGGCGGCGAGGAGGGAGTTGGCCGGCCGACGCGTTGTCGCCGCCGCTGTTGTCCTTCCGGCCGTTGCTCATCCGCGAGGCCGTCCCCAACGAGCCGCCGCTCTGGCCGTCCTCCCCCGTTCCAGCGCCATGGCAGCCAAAGTTATTCGGTGAGGGTATCACCGTCAACGGCAAGGCCTGGCCGTTCCTCATCGTCCACCGCCGCCGCTACCGCCTCCGCATCCTAAACGCCATCAACGCCCGCTACTTCAACGTCTCCCTCTCTAACAGCTTCCCCATCCACGTCTTCGACTCCGACGCGTTGTACCTCTCGGCCCTGGACACCGTCACCAACCTCCTCTCCCTGGCCGAGATCTTCGACGTCATCATCGACTTCTCCTAG
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Protein seq | MLDLVDGTILACLKWAMGRCLNRSTAHSSVSVGTIIDRLGVQGKKMQADNGLEVWARSLSNNRKDVVLWNRPSLRIGRALDSLGQWLSLLDHRGRAKGELEGNGGGEVEEEDAAPTKLPSGAREERKTETATAGGKWGWRRRGGSWPADALSPPLLSFRPLLIREAVPNEPPLWPSSPVPAPWQPKLFGEGITVNGKAWPFLIVHRRRYRLRILNAINARYFNVSLSNSFPIHVFDSDALYLSALDTVTNLLSLAEIFDVIIDFS |
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Function | Multicopper oxidase LPR1 homolog 4 [UniProtKB/Swiss-Prot:Q7F757] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_10G015770 | OsN22_10G015770_01 | Chr10 | 20462272 | 20465723 | - | NAM | ||
CDS seq | ATGCTGGACCTGGTGGATGGAACGATCCTGGCATGCTTGAAGTGGGCGATGGGGAGATGTCTTAATCGGAGTACCGCTCACAGTTCAGTATCTGTGGGCACTATCATAGACAGACTAGGTGTCCAAGGAAAGAAAATGCAAGCTGACAATGGATTGGAGGTTTGGGCCAGGTCACTCAGCAACAACAGGAAGGATGTGGTACTCTGGAACAGGCCATCACTGCGCATTGGTCGAGCATTGGACTCACTGGGTCAGTGGCTGTCACTGCTCGACCACAGGGGTAGAGCGAAGGGGGAGCTGGAGGGGAACGGCGGTGGTGAGGTAGAGGAGGAGGACGCCGCTCCGACGAAACTCCCATCCGGGGCGAGGGAGGAGCGGAAGACGGAGACGGCGACAGCGGGAGGGAAGTGGGGATGGAGGCGGCGAGGAGGGAGTTGGCCGGCCGACGCGTTGTCGCCGCCGCTGTTGTCCTTCCGGCCGTTGCTCATCCGCGAGGCCGTCCCCAACGAGCCGCCGCTCTGGCCGTCCTCCCCCGTTCCAGCGCCATGGCAGCCAAAGTTATTCGGTGAGGGTATCACCGTCAACGGCAAGGCCTGGCCGTTCCTCATCGTCCACCGCCGCCGCTACCGCCTCCGCATCCTAAACGCCATCAACGCCCGCTACTTCAACGTCTCCCTCTCTAACAGCTTCCCCATCCACGTCTTCGACTCCGACGCGTTGTACCTCTCGGCCCTGGACACCGTCACCAACCTCCTCTCCCTGGCCGAGATCTTCGACGTCATCATCGACTTCTCCTAG
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Protein seq | MLDLVDGTILACLKWAMGRCLNRSTAHSSVSVGTIIDRLGVQGKKMQADNGLEVWARSLSNNRKDVVLWNRPSLRIGRALDSLGQWLSLLDHRGRAKGELEGNGGGEVEEEDAAPTKLPSGAREERKTETATAGGKWGWRRRGGSWPADALSPPLLSFRPLLIREAVPNEPPLWPSSPVPAPWQPKLFGEGITVNGKAWPFLIVHRRRYRLRILNAINARYFNVSLSNSFPIHVFDSDALYLSALDTVTNLLSLAEIFDVIIDFS
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0493600 | SBH | 11.097032 | 5.853734 | 22.955397 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g35320 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os10g0493600 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0015990 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0016230 | SBH | 0.0 | 0.0 | 0.203040 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0015620 | SBH | 0.0 | 0.0 | 0.729231 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0016120 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0015950 | RBH | 0.0 | 0.000000 | 0.000000 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0313500 | RBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0015850 | SBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0335800 | SBH | 0 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0015610 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0015490 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0016000 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0062050 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0016150 | SBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G015520 | RBH | 6.106542 | 31.515642 | 11.206709 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0015910 | RBH | 0.0 | 0.0 | 0.000000 |