Basic Info
Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_09G008990 OGI:09037980 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr09:13950674-13955433
Gene Symbol -
DNA seq

TACTGATGAGGTGCAGGCTAGCAGCGCCCGCCAACCGGCACTGAGGTAAGGAGTTCCACAACCACAGCACTCAGATGCAAATAATGGGCATTGCCTCTGTCTAAGCTACTAAGCAGAGAAGCACACTGCAAATAAGAGCTGAGTGAGCTGGGAGCTGCCAATCTCTGTTTTCTCTTTTTCTTGGATTGCAATTTTTGATTTTAGATTGGATATTTGAGAGAATGCATAGGAAAGGGAAAGGAAAAGGGAAAGGGATGCCTTTACATTGTACTTATCTTTCCTTACGTTACCTATCTCAGATGTGGTCATAGTAATATACTTTTTTCTTTGTGCCACTTATCTTTCCTTTCTATGCTCCACTGATATATCAGCTGGTCCATGTGCTATTTGGTGATTGCTGCTTACATAGTTGTTTTTATTTATCTCCGTACGCTATGTGATGTTATATTCCCTTCTCGATATATGTTCAGCCATTCAATCAGTTTTGATTAGTTAATGTTCATGCATCAGATTTGTTAATACAAAATGTTCTCTGATCTGGTATTCAGCTTGGCTACCAGTACATGTTACAAGTTCAATCTTCCACAAGCAATTGAGAAAGGTTGCAGGTGAGAGGCAAGCAGAAGCATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGGTACTAATACTAACACTATTATTTTAAATCATGCCCCTTCTATAGCTTGCTTCTTTGGCTGCATGTACTATAGCTGATTCTTTGCTGTTATATGATATTTTGAACTTCCTACAGATGTTGTATATGCTATTTAATTTTCATTTTTGTTTTCATGCTCTGCAGTTTCATCTGCATGTAACCTAAATAATTTCACGGTGCTCAACTGGATCACTGTGGGTGTAGTTTCATTGCTCATTTCCCATGTGAATATTAATTTATTGGCAATCCTAATTGTAGCTGCCATTTGATCTCCTTTGTGATGTTTTACCTGTCCAAATTTTTATCCCAACGGGCATCCTTGAGGTATATCTGTGTTTATGTTATAGGTGCGCGCTGATGCTTGGTTCTGCTTCATTTAATGGCTTAGCTTGATTAACCTGAAAATGTGAATTGTGCTCTTAGGGGTTTTTATACCATATAATGTAATCTATCTTTTTCAGCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCAGTAAGTGTAAGACTTAAAAAAAATCCATGGGTATTTTTTCACTTCCCAGTCGTAACATACATGTCATAATGTTAAGCACTAATTGATTTAGTTATAAACTATGTTTGTGATTACACTAGCAGGTCCCATTAATCAATGGAAAATATTCTTTTTTTTCGCACATAGACAAGTTATATTTCCAAGTAAATTTCTTCATTCAAAAATCACTTATTTTGGTATCAATGGCTAGCGTAACCAACTCAGATGATCTTCTTGTTGATAAAATGCAGTATGTTCAGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTGTTAGTGTTTTTCTCTCCCTTGAAATACATATTTTTTTCCTGACTATTGGTAATCAAGTAATGTTGTAATTTTCCTTTTCAAGGCACACAGTTCTCACTTGTTTGTGGTGGTGATGGTGGTGGTTTTTAACATATAATGTGATATCTTTTCTTTTTCAGCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGTCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATCTGGGTAAATTTTCCACTCAATTCTACTCTTACTTCTAGCCGCTGTATTATGTTTTCAGTTTGGCCATAACATAATCGAGGTTTCAGTTAATATGTAATTTGTGGTGTATTACTTGCTACCTACAGTCCCATTAAATTGATGTTTTCTTACCGCCTATGCTCAGACTACAATCACTGGCAGTCCAAGCAGCCTGCTTCTTGCCTCTTTTAATAAGATTACACATATATACATGGATTAATTGTGTGATTCTTCTCAAAATGCACTTGAAATCTGAAGGTGTATTCTACATAGTTTGTGTATATGGATTTATTCACTAATTCTTCTTCAAGCAGACAATCTTGGTTTGCAGCCCCAAGTAAAGGGCAAGTGTACGAATTTAGCCACAAAAGCGACGCCAACGAGGATCGCCATCGACGGTGACCGCTGCTCCATCGATCCTTCTTCCCCCGTTTGCTACTCTCACTTCACAGGTTCAAATACCATCCCCGCGAGATCTCATCTCCAAACCACATGCCTTTACTATTACCACACTATTTCGCTCTCTTTCTATTCTTTTCATTCCCCATTTTCTCTATACCGAATATATGTTTTTAGATCATCGAGCGTCACACCCTTCCTTGAGTCAATCAAACTATCATAGATCTACCATTAACCCTAAGTACTGTTGACAGCCCTAATCAGTGATTATGCTTAAGTGATCTAACCTACAAACCCTCTTTGATATTAGCTGACCCAAAAAATCCTTTCTATAACCATTTTATTATAGGGGTAGACTATTTGATTGTATCATTTAACTATGTAGATTTGGCATCCTAAATATACACCTATTCTATTACATATTCTCTCACTCATCCTTATTTCAGTTCAGATATAAATGTTATACTTTTTGGCTTGCCCATTATTGAAACATGTATACTCGTACTTTAGCCCCTTTCAATTCCTTATATTTTATATTTGTGTCATGACTTGCTAATATCGGATTCAGTTCCTAATATTTCTAATATAAAAATTTCCCTTTTTCCATACATTAGAACAATACCATTACACGAAAGTACAATAAATAATTAATACTCTTTCACATAAATCCTTTAACTACTATACTGAAAAAAATACTTACATCAACTGTAAATTATTAAGCTTTTTCACGGCTATTTAGTCCTATTCTTGCATCATAATTATCTTATATCTTATCGTAGTATAGCCACTTAACCCAGCACATTATCTTCTTACCATATATATCTTTCCAGCTACAACTAAGATTTACACCACATAAATACTTACATACATCAAGTTATAGATCACATACTTCATTGCATTTCTACATATCCCAAAATACTCACCCTGTTTAAAAATAAAAAAATTATAATAAAAACTCTAATAACTAGCTGAGCCTCTCATAACTTTTTTTATTTATCAAATACATCTAACTACATGTGTATATATATTGTAGCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGGTAAGCTCAAAGTCAAACAAAACTTTCTATGTACAATATGCTGTTAGCACCAGTGCGGATATGATATTTTCTTTCTACAGCCTGTGCCAATCACACTTGCGACAGCATATAAGATGCAGCATGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGTACATGACGACAGGATGGAGATAATCTGAAGTTAGAAACTGGAGAAACGATTCTTTTCAGGATGCCATCACGGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCTAACAAAAGGTCCCCTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGGTACAAAGCTTGCCTCATCACATTTTTTCAACTTACACTACCCATTAACATGTCTATTCTGTTTTCGCCGGGTAATAGAAGATATACAATTAAATCAGCCAGATACTCCTCCAACTTACATTGGCTGAAAACACTGCTATATTGCCTCCTGCAAAATTGCACATGCTGGACAAGTGATTTAAATCTTTCTATCTATGTTTCTATTCATATGTAATCATTTTCTGTGTCATTTTTTACTAGCAGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTGTCTAGAAGAATCAAACAAGTTCTATGTAGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGGTAATTTTTGACACAACATTTCCATCTTCTTATACCCATACTGAGCATATAAATGTCACTTTTCTTTTTCAGTACTTTGCGACTGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAACATCAGGGTGGTTAGCTTTGCAGCAGCCAACAGCATCAACTTACACAATCTGCATCTTCCACTTTTATAGGACACAAGTCACCTCATGCTCACCATAGATGCTCTGTGAAAGTTACCTGCATCTTCAGTAGTCGCTGCTATTATCTACCCTGGAACGGCTACTATAATTCTCTCTATTATCCTTTGCTTGCGGTCTATCTAACTTCACTTGCTCAGTAAGCACGTGACCTATAACTGCTTATCATTGTCCTCAGCTCCTTTTGTTATTCATAAGCTGAGTGAACAATTAACCACTTTATGTACAAACAGCTAGCTTGTTATACTACAGGTTACTATGGTACT

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CDS seq

ATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGTCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATCTGGCCCCAAGTAAAGGGCAAGTGTACGAATTTAGCCACAAAAGCGACGCCAACGAGGATCGCCATCGACGGTGACCGCTGCTCCATCGATCCTTCTTCCCCCGTTTGCTACTCTCACTTCACAGCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCCTGTGCCAATCACACTTGCGACAGCATATAAGATGCAGCATGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGATGCCATCACGGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCTAACAAAAGGTCCCCTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTGTCTAGAAGAATCAAACAAGTTCTATGTAGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACTGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAA

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Protein seq

MTGILIYLHDNRCAISLGQSEVIEIKLCLLRILHMFSMDGDFGPLLELIKLHRMYGLLLVMDVPWTVGDHCDVGVIGLTKCSGTHGLLPCFDTFLLVSIQRETICVHPLDFMIWPQVKGKCTNLATKATPTRIAIDGDRCSIDPSSPVCYSHFTATIMSSAVFASMRLNATNQSYLPVPITLATAYKMQHGDNLKLKTSHGLKIKIKIKEVASTLMPSRSKACVMILNRQGLIRCPVKTPSNSSSANKRSPDPSGQLTRASTFDHASSSKSVPFLRNGTVTKENLADTSFCHQIKLTAELKSYIKEIADCLEESNKFYVVRMNRTFMEQDRVYFATEFSKKYIVNLVRGKTANIRVQIAGRPSTT
Function Putative B3 domain-containing protein Os10g0158600 [UniProtKB/Swiss-Prot:Q7XGM6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_09G008990 OsN22_09G008990_02 Chr09 13950674 13955433 + NAM
CDS seq

ACTGATGAGGTGCAGGCTAGCAGCGCCCGCCAACCGGCACTGAGCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGGCAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTGTCTAGAAGAATCAAACAAGTTCTATGTAGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACTGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAA

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Protein seq

TDEVQASSARQPALSLGQSEVIEIKLCLLRILHMFSMDGDFGPLLELIKLHRMYGLLLVMDVPWTVGDHCDVGVIGLTKCSATIMSSAVFASMRLNATNQSYLAVTKENLADTSFCHQIKLTAELKSYIKEIADCLEESNKFYVVRMNRTFMEQDRVYFATEFSKKYIVNLVRGKTANIRVQIAGRPSTT
Gene Transcript Chromosome Start End Strand Source
OsN22_09G008990 OsN22_09G008990_03 Chr09 13951079 13955433 + NAM
CDS seq

ATGACAGGAATATTGATTTACTTACATGATAACCGTTGTGCCATTAGCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGTCTTCTTCCCTGTTTTGACACCTTTTTGTTAGTATCAATTCAGAGAGAGACAATTTGCGTACATCCCTTGGATTTCATGATCTGGCCCCAAGTAAAGGGCAAGTGTACGAATTTAGCCACAAAAGCGACGCCAACGAGGATCGCCATCGACGGTGACCGCTGCTCCATCGATCCTTCTTCCCCCGTTTGCTACTCTCACTTCACAGCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGCCTGTGCCAATCACACTTGCGACAGCATATAAGATGCAGCATGGAGATAATCTGAAGTTAAAAACTTCCCATGGCTTGAAGATAAAGATCAAAATCAAGGAAGTAGCTAGCACACTGATGCCATCACGGTCTAAAGCGTGTGTTATGATACTGAACAGACAAGGCCTTATTAGATGTCCAGTGAAGACCCCATCCAACAGCTCATCAGCTAACAAAAGGTCCCCTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTGTCTAGAAGAATCAAACAAGTTCTATGTAGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACTGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAA

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Protein seq

MTGILIYLHDNRCAISLGQSEVIEIKLCLLRILHMFSMDGDFGPLLELIKLHRMYGLLLVMDVPWTVGDHCDVGVIGLTKCSGTHGLLPCFDTFLLVSIQRETICVHPLDFMIWPQVKGKCTNLATKATPTRIAIDGDRCSIDPSSPVCYSHFTATIMSSAVFASMRLNATNQSYLPVPITLATAYKMQHGDNLKLKTSHGLKIKIKIKEVASTLMPSRSKACVMILNRQGLIRCPVKTPSNSSSANKRSPDPSGQLTRASTFDHASSSKSVPFLRNGTVTKENLADTSFCHQIKLTAELKSYIKEIADCLEESNKFYVVRMNRTFMEQDRVYFATEFSKKYIVNLVRGKTANIRVQIAGRPSTT

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Gene Transcript Chromosome Start End Strand Source
OsN22_09G008990 OsN22_09G008990_01 Chr09 13950674 13955433 + NAM
CDS seq

ACTGATGAGGTGCAGGCTAGCAGCGCCCGCCAACCGGCACTGAGCCTTGGACAATCGGAGGTCATTGAGATTAAACTCTGCTTGCTTCGCATCCTCCATATGTTCAGCATGGATGGTGACTTTGGTCCATTGCTTGAGCTTATCAAGTTACACAGAATGTATGGGCTTTTGTTGGTCATGGACGTTCCTTGGACAGTTGGAGATCATTGTGATGTTGGTGTAATTGGGCTTACTAAGTGCTCTGGTACTCATGGTCTTCTTCCCTGTTTTGACACCTTTTTCCACAATCATGTCTTCCGCAGTGTTCGCATCAATGAGGCTGAATGCAACAAATCAAAGCTACTTGTGAAGACCCCATCCAACAGCTCATCAGCTAACAAAAGGTCCCCTGATCCATCAGGTCAATTAACCAGAGCAAGCACATTTGACCATGCATCTTCTAGCAAAAGCGTTCCATTTCTGAGGAATGGAACAGTAACAAAAGAAAACCTAGCAGACACCTCCTTCTGCCACCAGATTAAGCTCACAGCTGAATTGAAGAGTTACATCAAAGAGATTGCAGATTGTCTAGAAGAATCAAACAAGTTCTATGTAGTGCGTATGAACAGAACATTCATGGAACAGGACAGAGTGTACTTTGCGACTGAGTTTTCAAAGAAATACATTGTGAACTTGGTTCGAGGCAAGACAGCAAACATTAGAGTGCAGATTGCAGGTCGACCCTCAACAACTTAA

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Protein seq

TDEVQASSARQPALSLGQSEVIEIKLCLLRILHMFSMDGDFGPLLELIKLHRMYGLLLVMDVPWTVGDHCDVGVIGLTKCSGTHGLLPCFDTFFHNHVFRSVRINEAECNKSKLLVKTPSNSSSANKRSPDPSGQLTRASTFDHASSSKSVPFLRNGTVTKENLADTSFCHQIKLTAELKSYIKEIADCLEESNKFYVVRMNRTFMEQDRVYFATEFSKKYIVNLVRGKTANIRVQIAGRPSTT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr09 13952454 13953997 + OsN22_09G008990_01 OsN22_09G008990_02,OsN22_09G008990_01 All
AF Chr09 13950674 13951827 + OsN22_09G008990_01,OsN22_09G008990_02 OsN22_09G008990_03,OsN22_09G008990_02,OsN22_09G008990_01 All

Expression

Leaf Root Panicle
FPKM 0.152225 2.012675 0.375081

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0381300 RBH 0.000000 0.000000 1.114078
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g21360 RBH 0.000000 0.000000 0.137079
Nipponbare | IRGSP 1.0 | RAP-db Os09g0381300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0008560 RBH 0.132401 0.000000 0.731625
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0008540 RBH 0.000000 0.000000 0.845160
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0008770 RBH 0.558553 0.986714 2.973516
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0008580 RBH 0.064084 0.088704 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0008780 RBH 0.000000 3.741453 2.085528
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0218800 RBH 1.053879 2.027086 1.2889065
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0008720 RBH 0.000000 0.000000 0.161981
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0200200 RBH 1.446848 2.083942 10.7809815
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0008700 RBH 0.0 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0008510 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0008420 RBH 0.000000 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0008460 RBH 0.000000 0.0 0.657574
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0008450 RBH 0.223167 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0008760 RBH 0.305625 2.542152 2.630813
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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