Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_08G014590 | OGI:06061270 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr08:19868940-19874309 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACACCAAACTCCATTCACAGATCACCAAAATGAATCCAATAGCCTGCAAAGAACATTGTGTCAGGAATTAACACTAGTAAGAAATAAACACAAGCTCAACAATCTAGTAGTCCCTAGGGGCAGCAACCTTTTGGAAATTATATTCACCAGTGGTTTTATTTATTTAGCCTCATGAGTCCTGGCACTATAGGAAGTCATTGTAGTAGAGATATTGATTCCAAACAGTACCTATGTTCATTTGATTCCAGTATCTAACTATATCATACAATACTACTAATAGTATAAAAAAAAATGAGAGGTCCAAGAACAAGAAACAGAAACTGCATTATGTAAGAAGAGGCATATCATAAGATGAAGATGTGTACCTAAGCGCAACCAAGTCAAGGAGGAGTGGTCTGATGAGTGACCTGAGTCTGTCCAAATGCTATCATCTGTCGAATGAGGTTCTGAGTATCTGCTGCTGACTTCTGAGTATCTGTTATTGCCTTCTTTAGGTTCTCAATCTCCTCAGCTTGTTTCTGAGCTTTTGCCTCAGATTCTTCTGCCTGGGCTTCCAACCTCTGGACCTTTTGGCGAAGTCCTGCAGATTCTTCCTTCTCAGCCTCCAATTGTGCTTGTAGCTCCTGCATCTGCGGTGAAATAGATTTTGGAGCGGCAACAGGCTGTTGAAGTCCCACATTACGAAGGAATGTGCTTGACTTTGTCAACACTTGGGCAACAATATCTGTGCAAGTCATTTCCTGCTCCCCTTCATGTACTGGTCTTCTCAAAATGGCTTCCATATCATCCTAGCAAGACAATGATTTGTCAGGTTTCCTTCACAATTTATTTTATCAGTAGTTTCCTTCACAATCTCTACTCTAGTCCACTTTCACTATTTATCTTTTTCACATTGTAAAGTTACATTGTATAGCAGGTTCTTGTGTGAAGATGATGATTAACGGGTGCATGAAGATGATGATTAACGAAATAACAGTTCAATCAATCTGGAGCAATAGAGAGTATACTTCAATTAGATGGAGAAGTCCAAGTTATGTATTTGTTTATGATATTGTAGCTGAAATTGTACATTTTTTTTCCTAAAGTTCACCTTTTCATGTAAGATGTAAATTACCATTCAGTGAATGAAATGTGTGATTTTTCGACAAGTCCCTCCCTGATTTTTTTTATTTATAATGCTAAAGTGTGATGCAGTCTGATGTTCTCCAAATAAAATTGTGGATGCCAGAATTGAGGAGGTTTGTTTCTGTATCTAAGAAATTTATCTGTAGAGACGGTCTGAAGCCGTATCTAGTGTGTTTATTATAATATTTCTACAAAATATGGAAAATATATGTAGAGACGGTTTATCCGTCTCTATGGACCGTCTCTACCTAGTAGACACGGCTAGCAAAACCGTCTCTTGAAACGGGAGCAATGGCAACGCCTCAGAGACGGTTCACTGGCCATCTCTAGTACACCTAGAGACGGGCAAAACCGTCTCTACAAGAGAAGAAAACCGTCTCTACATCCTGTGTCTGCTGTAGTGTACTAAATAAAAAAAAGGAGAGATACTTACTGTAGCTTTCTTGGCATCATCACTAAAACCCTTAGTTTTGCTGCAATGCGTCAACTTGAATAGATCAATTGCAGTGGGCTCTGTATCTTTGTATTTTTCTTGCTTCTGGAATGTTCACAAACATATAATGACATTAGCAATGCATAGATTAAATACACACGTAAGATAAAACGTGTTCCAACACATGCATGCTGTCATACAACCGGTTTATATTCTTACCGCGACGTAGGCTGCTGCAATGTAAGACCGAGATCCAGTACACTGGTGAAACTTAACATTTTCACGGTTCTGTTTGAGCTTTGCACATTTTTCCTAGACATGACACAAGTGTATATCATAAGTAATACAATAAATATTGGAAACAGTAAAAACAATATGGTATTATATGAGCAATCTGGTCATGCACAGTTCATTAAATGTAATGTTTAGTACTATCAAATCATGGATGATATGAGCTAATTACTGATATAAGCATTTCATTGAATGTAATGTTTACTACTGTTAAATCATGGATGAATGAGCTAATTACTGATATGAGCAATCCAATGCAGATTAACACCTACAAATAAATTAAGGAGCAATGCTGTCAATATGAAACTAGGCCTACAAATAAACCAATGATATTGCAGTTCGGGCTAAAAATGATAGTAAAACTGTACAAATATATTCCAGCAACCAAAATGATAGTTGAAAACCTGACTGGAACAAAGCATCACATTACAGCAAATTGACTGGAACAGTGCAGCAGGAAACCTGAAGGACCAAGAAACTATGCAAAGCAACAGAGCACATTCATAGCAGCTTGAAAACACATCACCAGCACACATATCTCAATTACAGAGTTTACATAATTGAGTTCACAGCCCATAAGTTCATCAGCTTAAAAGACACATTAGGATGTAGTGCTCGAGTGCAACTAGCGGACTCACAGAAAACCAATATTGGCATAAACCATACCTTGTGTTTTGGGTTTGACCACATGTCTACCAATTTTCTCCATTGTTCATCAGTCATAGACGAACATGGTGATGTAGTCCTAACTTGATTTGCCGGTACCCCATCGAAGTATTTCTGCTTGAGCCTATACCTCATTTGGCGTGTTCCACCCTTTAGCATGTCAGCACACGCTGAAGTTACATCATTCTCCTTTTCACCAGTCAAGCTTAAGTTTACCTATACATTGAATAGCATAACATTAGTATTTAAAAAAGCAAAGGATGAAATTAGCATATATCGAACTAATCGAACAACGTCTTACAGATAGTTTGCCAATGAAGTTGTCCAATTGGTCCTTGAATTGGACTTTGTCCTTCTTGTATTCTTTCCAACTTGTAAGTATGGGTACATGCTGCCTGACTATGATCCCACCCTCAGAAGCCAACTTTGCAGCCTGCATAGGTGCCTCGGGCCTTCTTTTCCCTTCCTTTATAACAACTGGTATCCTAGTCCCTAAACCTCTGGTTATGCTATCCAGTTCTATGCCCATACTTGCTCCCCGATGGTCCACTTGAGTACTTGCCGTTAGGGTGCCTAAATAATACATTTCAAAAACCTTGTTGTCAATAATAAGATTCATATGACTATTATGAATGAATCAGATCACATAAATTGACATTGAAATAAATAGTTGAAGGTACTTGCCTTCTACTGTAATGTCCATCTCTTCATCATTCTGGATAGAAGTAGAATCTAGTACTGGTGGTGGCACCTCTGTTGCTCCAATTAGTCTTAGCGCAGCTGCTTCTTTTTCTCTCATGACACTCTGCCTGGTACACCTTGTTTGTTCCAAATTGTTAGGTGCCAGGACCCTCTTAGATGGTGTTCCTATTACAGCAACAGATGGTGCCACAGCCTTACAAAGAAACAGAGACATGACACGATAAGATATTGAGAAATTTCCACTTCAAAGGTACATACAAATATCACTCAAAAAAGGGGTCAGCCAGGAAATTGATTGTGCTCTCTGTCCATTGAATTACTCCAATAAAATTTACTTTACTCAAGAATAGCTACTCAACTTCTTGGAACCTACTCATATTTACAACTGAGTGAGGTGCACTACAACTGTGTTTCAATATGGGAGTCTTTTCTTGCCACTCGTAAGAAAAAAAAAGGTGATGTGACTGAAAAAAAAATACTGCTTAATTCAGTTATAAAGACAAATAGAATTGCATTAGCACGGGCATATTACTAGTGTTGTGTAGTAGAAGAGCTGGTACCTCAAGTTCAGTGCTTTCACTAAGCTGGTCATTTTTGTTCCTGTTTTTACTTGGTTTCTTCCTAGCATATGACTGCTTAACAATTTCTGATAGTCTTTTGATACCCAACTGTTGCATCCTCTGATCGATCCTCATGATATTCTTAGCCCTCTCCTTCTCAATGTCAGTTAACAGTGGTTCTGCAGATACATTGGTGCATTGAAATTAGTGGCAGATAAATGAAAATGAAATAATCAAAAGTGATAGTACTAGTAGCAGTGCCCATTTGATATGACTTAATAAACTACCAGGATTCCAAGAATTACAGTATATGGTCTGAAATTGAGGGAGACATAACTATACATAAGTATACGAAGGCACTGAAACACAGCAGATCGATCACCGGCCGGAACCGGAACCACAACGCAACACAACAGACGCACTCCATTGCCGCAGCCCCCGTCTCCTCGCGTCAGCGCCTCCGCGTCCTCGCGTCAGCGCCTCCGCGTCCTCGCGTCAGCGCCTCCGCGCGCCGCGCATCTGGGGACCCCACCCCGGCTTCGCCGCCGTCCGGCCCTGGTGCTCGCGGCGCCGTCGTAGCGTACCCCGTATCCCTAAGGACTAATAGCCAAGATGGTACCTGGGACTACCGCCATTGATGGTCTTGCCCTCTTCCTCCCCGGAGGCATCTTCCTTCTGGTTAGAGCAGCAACAGGAAGGAGGGAGGGAGTCGACCGTCTGGATAGGGGGGAGTGGCGGCTGGCTGGCGAGAGTGAAGCGAAATTTGGGAACGGGGAGTGATTCTAAGGTTAGCTTTGTATATATATGTGTGGCGCACCGGTTGGCTTTGTGCGAAAATGCCCTCACTTGGGCTGAGCCGCGACATAGCTAGTAGGGGCAAAACTGTCTTTCTCCATCAAAATCAGTGGCGGGGGGCTGGTTTGGCTCGCGCGGGTTAGCAGGACGATTTGGAGAACTAACTCCAAATGTGATGTTTTTTTCCTAAAATTTTCTAAAATCATTCTATTCAAGTTGTTGCGTTCTTACTTAAGTATTATTTTTGTCAATTTTTTTATTGTGAACATTTCAAATTTGAATTTAGAAAATGATAACTTGAAACGTCAATTTGAAACATCAGATGAATTCAGCTGAAGAAGTCATTAACATAAAAGTTGTAGAACTCACCTATATCTACAATTTTTATTTTGGTCATTTGTTCATTTCACAAAGTGATAGTAACATTGTGATGGGGGAGGGCACCACATCCTCCGCCTCCACAAAGTGATAGTACACGAATGCCGCTGCTGCTCTGGACGGGAAGTCTTCTCTTGCCACGCGTCCTACGACCTCTCCGTCCACCGCTGCGGCACCACATCTACCCTTCGCACCCTCCCTCGCCGCATCCCGCTTCCACGTCGACGCCGGGGGCCTCCTTTTCCACCACAACTTCACTGCCTCGTCTCCCATTGTCAAGGAGTTCATCCTCTCGGTGGACGCTGCTGGCAACACTTCCGACTGTCTCATCAACGCAACGGCAGCAACATGTGCACTGTCCGCGATTTTGGTCGTTACCGAGCCTGGCTGCCCTTCCCCACCCCCAGCGTGGCGCCAT
More
|
||||||||||
| CDS seq | ATGGCGCCACGCTGGGGGTGGGGAAGGGCAGCCAGGCTCGGTAACGACCAAAATCGCGGACAGTGCACATGTTGCTGCCGTTGCGTTGATGAGACAGTCGGAAGTGTTGCCAGCAGCGTCCACCGAGAGGATGAACTCCTTGACAATGGGAGACGAGGCAGTGAAGTTGTGGTGGAAAAGGAGGCCCCCGGCGTCGACGTGGAAGCGGGATGCGGCGAGGGAGGGTGCGAAGGACCAGTACATGAAGGGGAGCAGGAAATGACTTGCACAGATATTGTTGCCCAAGTGTTGACAAAGTCAAGCACATTCCTTCGTAATGTGGGACTTCAACAGCCTGTTGCCGCTCCAAAATCTATTTCACCGCAGATGCAGGAGCTACAAGCACAATTGGAGGCTGAGAAGGAAGAATCTGCAGGACTTCGCCAAAAGGTCCAGAGGTTGGAAGCCCAGGCAGAAGAATCTGAGGCAAAAGCTCAGAAACAAGCTGAGGAGATTGAGAACCTAAAGAAGGCAATAACAGATACTCAGAAGTCAGCAGCAGATACTCAGAACCTCATTCGACAGATGATAGCATTTGGACAGACTCAGGCTATTGGATTCATTTTGGTGATCTGTGAATGGAGTTTGGTGTGA
More
|
||||||||||
| Protein seq | MAPRWGWGRAARLGNDQNRGQCTCCCRCVDETVGSVASSVHREDELLDNGRRGSEVVVEKEAPGVDVEAGCGEGGCEGPVHEGEQEMTCTDIVAQVLTKSSTFLRNVGLQQPVAAPKSISPQMQELQAQLEAEKEESAGLRQKVQRLEAQAEESEAKAQKQAEEIENLKKAITDTQKSAADTQNLIRQMIAFGQTQAIGFILVICEWSLV |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_08G014590 | OsN22_08G014590_01 | Chr08 | 19868940 | 19874309 | - | NAM | ||
| CDS seq | ATGGCGCCACGCTGGGGGTGGGGAAGGGCAGCCAGGCTCGGTAACGACCAAAATCGCGGACAGTGCACATGTTGCTGCCGTTGCGTTGATGAGACAGTCGGAAGTGTTGCCAGCAGCGTCCACCGAGAGGATGAACTCCTTGACAATGGGAGACGAGGCAGTGAAGTTGTGGTGGAAAAGGAGGCCCCCGGCGTCGACGTGGAAGCGGGATGCGGCGAGGGAGGGTGCGAAGGACCAGTACATGAAGGGGAGCAGGAAATGACTTGCACAGATATTGTTGCCCAAGTGTTGACAAAGTCAAGCACATTCCTTCGTAATGTGGGACTTCAACAGCCTGTTGCCGCTCCAAAATCTATTTCACCGCAGATGCAGGAGCTACAAGCACAATTGGAGGCTGAGAAGGAAGAATCTGCAGGACTTCGCCAAAAGGTCCAGAGGTTGGAAGCCCAGGCAGAAGAATCTGAGGCAAAAGCTCAGAAACAAGCTGAGGAGATTGAGAACCTAAAGAAGGCAATAACAGATACTCAGAAGTCAGCAGCAGATACTCAGAACCTCATTCGACAGATGATAGCATTTGGACAGACTCAGGCTATTGGATTCATTTTGGTGATCTGTGAATGGAGTTTGGTGTGA
More
|
|||||||
| Protein seq | MAPRWGWGRAARLGNDQNRGQCTCCCRCVDETVGSVASSVHREDELLDNGRRGSEVVVEKEAPGVDVEAGCGEGGCEGPVHEGEQEMTCTDIVAQVLTKSSTFLRNVGLQQPVAAPKSISPQMQELQAQLEAEKEESAGLRQKVQRLEAQAEESEAKAQKQAEEIENLKKAITDTQKSAADTQNLIRQMIAFGQTQAIGFILVICEWSLV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0271600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g40350 | RBH | 0.0 | 0.0 | 0.110987 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0271600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0006930 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0006900 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0006990 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0006870 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0010290 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0385400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0006740 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0405700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0010110 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0010050 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0010160 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0006970 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0010190 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G009190 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0002760 | SBH | 0.0 | 0.0 | 0.0 |
