Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_08G008300 | OGI:04014620 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr08:9170684-9171376 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAATTCCTACTAGCTGAAGTCTCACCGGAAACGTTGCCCTGCTTGCTGATTCCCGATGGTGGAGTGGCAACTGTCTTGACAGCTGTAACAGGTAGGATCTTCTTGCCCGTGAGGTTACCGAGCGGTGATTTGTCGATGGGCCTCCGGATTGGAGCAATACGGGGTGCATTGCTAGAACTGACAACAGTCAGGCAACCTGGTGCTGACGACACTTGTTGCGGGTGCTGACGAAGGAGCATACTGCCTCTTTGTAACTGTAGTGAGCTGTTGTTCTCCTGGCATTGCTTACCCTGCTGGCGCTGGTGCTGTAGGCTTGAAACGATGGCCGGTGGAACAATACGGCCTCTGACGGTGCCCTTGACGATGATCCGTTGAGGCTGAGGTTGCACATTCAGGTGTCGATTGGGGTCGGGGGCAGTGCTGGTAACTTGTGAATCACGACGAACTGCCTTTGCTGCTCTTGGAAGAGGACAATCACTGAAACGATGTCCTGGCTTACGACAGTTGCGACAGAATTGACTTGCTTGGCCTCGGGGTGCAGGCTTCTGATTATGCACTTTGGCAACTGAAACTGGAACACACAGTGATTTACGAACCTCCCTGGCGACGTTGCTTCCTCCATGGTTGGCTTCCACTGGAGTTGTGGTTGGTGAAAGAGTAGAAGGGTTGAGACTGTTGTTGTCGACCGCCAT
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| CDS seq | ATGGCGGTCGACAACAACAGTCTCAACCCTTCTACTCTTTCACCAACCACAACTCCAGTGGAAGCCAACCATGGAGGAAGCAACGTCGCCAGGGAGGTTCGTAAATCACTGTGTGTTCCAGTTTCAGTTGCCAAAGTGCATAATCAGAAGCCTGCACCCCGAGGCCAAGCAAGTCAATTCTGTCGCAACTGTCGTAAGCCAGGACATCGTTTCAGTGATTGTCCTCTTCCAAGAGCAGCAAAGGCAGTTCGTCGTGATTCACAAGTTACCAGCACTGCCCCCGACCCCAATCGACACCTGAATGTGCAACCTCAGCCTCAACGGATCATCGTCAAGGGCACCGTCAGAGGCCGTATTGTTCCACCGGCCATCGTTTCAAGCCTACAGCACCAGCGCCAGCAGGGTAAGCAATGCCAGGAGAACAACAGCTCACTACAGTTACAAAGAGGCAGTATGCTCCTTCGTCAGCACCCGCAACAAGTGTCGTCAGCACCAGGTTGCCTGACTGTTGTCAGTTCTAGCAATGCACCCCGTATTGCTCCAATCCGGAGGCCCATCGACAAATCACCGCTCGGTAACCTCACGGGCAAGAAGATCCTACCTGTTACAGCTGTCAAGACAGTTGCCACTCCACCATCGGGAATCAGCAAGCAGGGCAACGTTTCCGGTGAGACTTCAGCTAGTAGGAATTAA
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| Protein seq | MAVDNNSLNPSTLSPTTTPVEANHGGSNVAREVRKSLCVPVSVAKVHNQKPAPRGQASQFCRNCRKPGHRFSDCPLPRAAKAVRRDSQVTSTAPDPNRHLNVQPQPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGSMLLRQHPQQVSSAPGCLTVVSSSNAPRIAPIRRPIDKSPLGNLTGKKILPVTAVKTVATPPSGISKQGNVSGETSASRN |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_08G008300 | OsN22_08G008300_01 | Chr08 | 9170684 | 9171376 | - | NAM | ||
| CDS seq | ATGGCGGTCGACAACAACAGTCTCAACCCTTCTACTCTTTCACCAACCACAACTCCAGTGGAAGCCAACCATGGAGGAAGCAACGTCGCCAGGGAGGTTCGTAAATCACTGTGTGTTCCAGTTTCAGTTGCCAAAGTGCATAATCAGAAGCCTGCACCCCGAGGCCAAGCAAGTCAATTCTGTCGCAACTGTCGTAAGCCAGGACATCGTTTCAGTGATTGTCCTCTTCCAAGAGCAGCAAAGGCAGTTCGTCGTGATTCACAAGTTACCAGCACTGCCCCCGACCCCAATCGACACCTGAATGTGCAACCTCAGCCTCAACGGATCATCGTCAAGGGCACCGTCAGAGGCCGTATTGTTCCACCGGCCATCGTTTCAAGCCTACAGCACCAGCGCCAGCAGGGTAAGCAATGCCAGGAGAACAACAGCTCACTACAGTTACAAAGAGGCAGTATGCTCCTTCGTCAGCACCCGCAACAAGTGTCGTCAGCACCAGGTTGCCTGACTGTTGTCAGTTCTAGCAATGCACCCCGTATTGCTCCAATCCGGAGGCCCATCGACAAATCACCGCTCGGTAACCTCACGGGCAAGAAGATCCTACCTGTTACAGCTGTCAAGACAGTTGCCACTCCACCATCGGGAATCAGCAAGCAGGGCAACGTTTCCGGTGAGACTTCAGCTAGTAGGAATTAA
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| Protein seq | MAVDNNSLNPSTLSPTTTPVEANHGGSNVAREVRKSLCVPVSVAKVHNQKPAPRGQASQFCRNCRKPGHRFSDCPLPRAAKAVRRDSQVTSTAPDPNRHLNVQPQPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGSMLLRQHPQQVSSAPGCLTVVSSSNAPRIAPIRRPIDKSPLGNLTGKKILPVTAVKTVATPPSGISKQGNVSGETSASRN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g12560 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0007230 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0011060 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0010360 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0012570 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0010960 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0531400 | SBH | 0.048211 | 0 | 0.4520115 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0013340 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0309100 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0012560 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0009940 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0012910 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0008600 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0012670 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G011540 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0006720 | SBH | 0.000000 | 0.000000 | 0.0 |
