Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_05G0309100 | OGI:05066740 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr05:20198085-20201252 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGGAGTTTGGATGGGCCCTGCGACGGCCTATGCGGCTTCCGGATTCACCTAGGCACGAGAGGGGACTGCCCGCTGCCTTGCGAGGAGTGGGGGTGAAACCTGAGGTGTGGTGTGCTTGGTTAGAGGGGGTTATGCGAAGGGTCCTGTCACGGCCTCTTTCCGGTATGTCGTGGTGGCATGCCAGCGCACGGAAACGTGTCGTGGGGCTGTGTCTTGTGGGTACAGTTGTACACCTCTTATCAGAGTAAAACTATTCGAATAGCCGTGCCCGCGGTTATGGGCGGTCGACCAGATTCACCGTGATTAGTCCCATCTTAATAAATCGACCCAATGCACTGTAGTCCAGGTGGGTTGGTTGGGCCTGTTCAACGTGGTGTAGCGTTGATCAGTGGAGATTTAATGTTACTTTAATTGCTCAACAGTTTACTGTTTTGCTCAATAAAATGTTTTACAACCGCCTTTATGCAAATAGCCACAAACCGTCCTTGTGTTCCCCTTGCACGTCTGCATCGTTGGTGTGGCTTGCTGAGTACGGTGGTTGTACTCAGTCTTGCTATTATTCCCCCTTTTCAGAAGTGTAGTGCTTCTGAGCTGAAGACGAAGTTAGAAGACCAAGGCTCAGACCCCAGTTGAGTTTTGCCTGTGGAGTGGAGCTGAAGCCCCGCTAGGATCGCCTTTTTCCGCTGCTGCTGATTTTGTTTCGGTGTGAGGACTAAGTGCCTCTTTTGTAAGTATTTTACGCTTTATTTACGTTTGGAACTGTTTATTACTTATCGTTTTGTGTACCCTGGCTGGTCCTGGACAGGGATTTAATACACAAAACAGTCTGGAAATTTGGGCTAAATTTCTGGGCGTGACAAAGTGGTATCAGAGCCAACTCGACTGTAGGTTGAGCCAAACTGTCAAACCCTAAGGACAAGCTTTCTGAAAACCCTATTTGAAAAATGTCTCCCCTCGTCCTTCGGCTTTTCTTTGCGAAACGGGTTTTCAAAATTCTCCTCCCTGTCCCTCCAATTCTTATAGTTGTTAAACCGTGGAGGATAAACCGTCAGCTTCGTGTTTGTTCGGAAGTCAAGTCAAGCATCAAGCTTCATGCAACAAAGAGCGGGAAGGTCAGTTCAGAGTCGTCGTTCCGCGAAGATCAAGGAGAGTGTTCCCGGAGTTTACCTAAACCCAATCCTTCCTGGAAGAGTAGTTTCGTTAGCTGCTAGGTCGTGTGTTGTTTGCTTGTGTGTAGGGGTATGGTTTGCATCATTGGTGGGGATGCGACCATACTAGGTTGTTTGCTTAAGCAACTTGAACAATAAAAGTCTACTCACAACAGATCAGTAGGCAAGTGGTTTAGTACCTCATCTCTAGTAATCCCTCTCATTCCCTCCCCCTCTCCCTCGTGCCTGCAGCAAATGGTCAGTGTGAGGGGCAATTTCAACGGATCAGGATCCCGTCAGTTTCATGGATCAACTCAGCTCAATTCAATAAGCTTCCCACGTCAACCTCTCAAAGATCAGCCACAATCCCAAGTCATGGCTAATCAGACTCAGACAGTGGAAGAGTTGTTACAGCAGATGCGACATCGGTACCAGATCTATCTGATGCAGCAGATGCAACAGCAATGTCAGGAGCCGCGTCAAGTCCACCAGCCACAAATGCAAGTCCAGGTGCTAGCCCGGAACCTGAATAAGAGTCAAAGTCAGGAATTCCCAATATCGGCACCGAAGACCCCTGTCAAAATGTTGTCTAGATCCCTGAAGATAACTGCAGCCAAGTTACCGTCGGACCAAAGGGAAGTAAGTGCTACCCGTTATGATTGTGGTGAGCAAGGTCATTATATAAGGAACTGTCCATGGAAGGTGTTCGCCAGGTCACCTGAAAAGGACGAGAAGCAGTGCCCAGGAAGTAACCAAGCTCCAAGTCAGTCTACTAACAAGAAAGATGGTACTCTCCAGCACAGCTCTGGAGCGAACAGGAAGGTGATACGGAAGATGGATAATGGTAGGACCATGATCATCACCAGTTCAGAATTTACTCCTGAAGACGCAGCAAGGATACCCAAGCGTCAGAGAGGAAGAAATACCTTCCGTGGAGCACGCCAGCTAACCCGACATCTCATAAAGTACGGTCCGCCCAGACCCGAAGATGATATATCAGGAGAACGGTTCTCTACTGATGACGACGATGATGATGATGATGATGATGATGATGAGGATGAGGCGACCCTTAACAGTTTCATGGAAAGAGGATTGGAGTTCAAAGCATGTACTAGATGTGGGATAGTCGGACACACTGCTAGTTTATGCCTCCCCACCTGCCGCTGTGGTGAATATACCCATTACTCAGATGCATGCCCTTTGAGGAAGGTCACATGTTTCTTGTGTGAAGGAACAGATCATGCGCCTAAGGACTGTCAGTTGAACGCGGTCATAGCTAAGACCAAGAAAGAACAAGGGACAACCGTGCAACCCATTCGTCAACCAATGGCGGTCGACAACAACAGTCTCAACCCTTCTACTCTTTCACCAACCACAACTCCAGTGGAAGCCAACCATGGAAGAAGCAACGTCGCCAGGGAGGTTCGTAAATCACTGTGTGTTCCAGTTTCAGCTGCCAAAGTGCATAATCAGAAGCCTGCACCCCGAGGCCAAGCAAGTCGATTCTGTCGCAACTGTCGTAAGCCAGGACATCGTTTCAGTGATTGTCCTCTTCCAAGAACAGCAAAGGCAGTTCGTCGTGATTCACAAGTTACCAGCACTGCCCATGACACCAATCGACACCTGAATGTGCAACCTCCGCCTCAACGGATTATTGTCAAGGGCACCGTCAAAGGTCGCATTGTTCCACCGGCAATCGTTTCAAGCCTACAACACCAACGCCAGCAGGGTAAGCAATGCCAGGAGAACAACAGCTCGCTACAGCTACAAAGAGGCGGTACGCTCCTTCGTCAGCACCCGCAGCAAGTGTCGCCAGCACCAGGTCGCCCGACTATTGTCAGTTCTAGCAATGCACCTCGTATTGCTCCAATCTGGAGGCCCATCGACAAATCACCGCTCGGTGACCCCACGGGCAAGAAGATCCTACCCGTTACAGCTGACAAAACAGTTGCCCCTCCACCATCGAAGATCAACAAGCAGAGCAACGTTCCCGGTGAGACTTCTGGTAGTAGGAACTAA
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CDS seq | ATGGAGTTTGGATGGGCCCTGCGACGGCCTATGCGGCTTCCGGATTCACCTAGGCACGAGAGGGGACTGCCCGCTGCCTTGCGAGGAGTGGGGGTGAAACCTGAGGTGTGGTGTGCTTGGTTAGAGGGGGTTATGCGAAGGGTCCTGTCACGGCCTCTTTCCGTTGTTAAACCGTGGAGGATAAACCGTCAGCTTCGTGTTTGTTCGGAAGTCAAGTCAAGCATCAAGCTTCATGCAACAAAGAGCGGGAAGCAAATGGTCAGTGTGAGGGGCAATTTCAACGGATCAGGATCCCGTCAGTTTCATGGATCAACTCAGCTCAATTCAATAAGCTTCCCACGTCAACCTCTCAAAGATCAGCCACAATCCCAAGTCATGGCTAATCAGACTCAGACAGTGGAAGAGTTGTTACAGCAGATGCGACATCGGTACCAGATCTATCTGATGCAGCAGATGCAACAGCAATGTCAGGAGCCGCGTCAAGTCCACCAGCCACAAATGCAAGTCCAGGTGCTAGCCCGGAACCTGAATAAGAGTCAAAGTCAGGAATTCCCAATATCGGCACCGAAGACCCCTGTCAAAATGTTGTCTAGATCCCTGAAGATAACTGCAGCCAAGTTACCGTCGGACCAAAGGGAAGTAAGTGCTACCCGTTATGATTGTGGTGAGCAAGGTCATTATATAAGGAACTGTCCATGGAAGGTGTTCGCCAGGTCACCTGAAAAGGACGAGAAGCAGTGCCCAGGAAGTAACCAAGCTCCAAGTCAGTCTACTAACAAGAAAGATGGTACTCTCCAGCACAGCTCTGGAGCGAACAGGAAGGTGATACGGAAGATGGATAATGGTAGGACCATGATCATCACCAGTTCAGAATTTACTCCTGAAGACGCAGCAAGGATACCCAAGCGTCAGAGAGGAAGAAATACCTTCCGTGGAGCACGCCAGCTAACCCGACATCTCATAAAGTACGGTCCGCCCAGACCCGAAGATGATATATCAGGAGAACGGTTCTCTACTGATGACGACGATGATGATGATGATGATGATGATGATGAGGATGAGGCGACCCTTAACAGTTTCATGGAAAGAGGATTGGAGTTCAAAGCATGTACTAGATGTGGGATAGTCGGACACACTGCTAGTTTATGCCTCCCCACCTGCCGCTGTGGTGAATATACCCATTACTCAGATGCATGCCCTTTGAGGAAGGTCACATGTTTCTTGTGTGAAGGAACAGATCATGCGCCTAAGGACTGTCAGTTGAACGCGGTCATAGCTAAGACCAAGAAAGAACAAGGGACAACCGTGCAACCCATTCGTCAACCAATGGCGGTCGACAACAACAGTCTCAACCCTTCTACTCTTTCACCAACCACAACTCCAGTGGAAGCCAACCATGGAAGAAGCAACGTCGCCAGGGAGGTTCGTAAATCACTGTGTGTTCCAGTTTCAGCTGCCAAAGTGCATAATCAGAAGCCTGCACCCCGAGGCCAAGCAAGTCGATTCTGTCGCAACTGTCGTAAGCCAGGACATCGTTTCAGTGATTGTCCTCTTCCAAGAACAGCAAAGGCAGTTCGTCGTGATTCACAAGTTACCAGCACTGCCCATGACACCAATCGACACCTGAATGTGCAACCTCCGCCTCAACGGATTATTGTCAAGGGCACCGTCAAAGGTCGCATTGTTCCACCGGCAATCGTTTCAAGCCTACAACACCAACGCCAGCAGGGTAAGCAATGCCAGGAGAACAACAGCTCGCTACAGCTACAAAGAGGCGGTACGCTCCTTCGTCAGCACCCGCAGCAAGTGTCGCCAGCACCAGGTCGCCCGACTATTGTCAGTTCTAGCAATGCACCTCGTATTGCTCCAATCTGGAGGCCCATCGACAAATCACCGCTCGGTGACCCCACGGGCAAGAAGATCCTACCCGTTACAGCTGACAAAACAGTTGCCCCTCCACCATCGAAGATCAACAAGCAGAGCAACGTTCCCGGTGAGACTTCTGGTAGTAGGAACTAA
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Protein seq | MEFGWALRRPMRLPDSPRHERGLPAALRGVGVKPEVWCAWLEGVMRRVLSRPLSVVKPWRINRQLRVCSEVKSSIKLHATKSGKQMVSVRGNFNGSGSRQFHGSTQLNSISFPRQPLKDQPQSQVMANQTQTVEELLQQMRHRYQIYLMQQMQQQCQEPRQVHQPQMQVQVLARNLNKSQSQEFPISAPKTPVKMLSRSLKITAAKLPSDQREVSATRYDCGEQGHYIRNCPWKVFARSPEKDEKQCPGSNQAPSQSTNKKDGTLQHSSGANRKVIRKMDNGRTMIITSSEFTPEDAARIPKRQRGRNTFRGARQLTRHLIKYGPPRPEDDISGERFSTDDDDDDDDDDDDEDEATLNSFMERGLEFKACTRCGIVGHTASLCLPTCRCGEYTHYSDACPLRKVTCFLCEGTDHAPKDCQLNAVIAKTKKEQGTTVQPIRQPMAVDNNSLNPSTLSPTTTPVEANHGRSNVAREVRKSLCVPVSAAKVHNQKPAPRGQASRFCRNCRKPGHRFSDCPLPRTAKAVRRDSQVTSTAHDTNRHLNVQPPPQRIIVKGTVKGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGGTLLRQHPQQVSPAPGRPTIVSSSNAPRIAPIWRPIDKSPLGDPTGKKILPVTADKTVAPPPSKINKQSNVPGETSGSRN |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_05G0309100 | OsZS97_05T0309100.1 | Chr05 | 20198085 | 20201252 | + | makerRMon | ||
CDS seq | ATGGAGTTTGGATGGGCCCTGCGACGGCCTATGCGGCTTCCGGATTCACCTAGGCACGAGAGGGGACTGCCCGCTGCCTTGCGAGGAGTGGGGGTGAAACCTGAGGTGTGGTGTGCTTGGTTAGAGGGGGTTATGCGAAGGGTCCTGTCACGGCCTCTTTCCGTTGTTAAACCGTGGAGGATAAACCGTCAGCTTCGTGTTTGTTCGGAAGTCAAGTCAAGCATCAAGCTTCATGCAACAAAGAGCGGGAAGCAAATGGTCAGTGTGAGGGGCAATTTCAACGGATCAGGATCCCGTCAGTTTCATGGATCAACTCAGCTCAATTCAATAAGCTTCCCACGTCAACCTCTCAAAGATCAGCCACAATCCCAAGTCATGGCTAATCAGACTCAGACAGTGGAAGAGTTGTTACAGCAGATGCGACATCGGTACCAGATCTATCTGATGCAGCAGATGCAACAGCAATGTCAGGAGCCGCGTCAAGTCCACCAGCCACAAATGCAAGTCCAGGTGCTAGCCCGGAACCTGAATAAGAGTCAAAGTCAGGAATTCCCAATATCGGCACCGAAGACCCCTGTCAAAATGTTGTCTAGATCCCTGAAGATAACTGCAGCCAAGTTACCGTCGGACCAAAGGGAAGTAAGTGCTACCCGTTATGATTGTGGTGAGCAAGGTCATTATATAAGGAACTGTCCATGGAAGGTGTTCGCCAGGTCACCTGAAAAGGACGAGAAGCAGTGCCCAGGAAGTAACCAAGCTCCAAGTCAGTCTACTAACAAGAAAGATGGTACTCTCCAGCACAGCTCTGGAGCGAACAGGAAGGTGATACGGAAGATGGATAATGGTAGGACCATGATCATCACCAGTTCAGAATTTACTCCTGAAGACGCAGCAAGGATACCCAAGCGTCAGAGAGGAAGAAATACCTTCCGTGGAGCACGCCAGCTAACCCGACATCTCATAAAGTACGGTCCGCCCAGACCCGAAGATGATATATCAGGAGAACGGTTCTCTACTGATGACGACGATGATGATGATGATGATGATGATGATGAGGATGAGGCGACCCTTAACAGTTTCATGGAAAGAGGATTGGAGTTCAAAGCATGTACTAGATGTGGGATAGTCGGACACACTGCTAGTTTATGCCTCCCCACCTGCCGCTGTGGTGAATATACCCATTACTCAGATGCATGCCCTTTGAGGAAGGTCACATGTTTCTTGTGTGAAGGAACAGATCATGCGCCTAAGGACTGTCAGTTGAACGCGGTCATAGCTAAGACCAAGAAAGAACAAGGGACAACCGTGCAACCCATTCGTCAACCAATGGCGGTCGACAACAACAGTCTCAACCCTTCTACTCTTTCACCAACCACAACTCCAGTGGAAGCCAACCATGGAAGAAGCAACGTCGCCAGGGAGGTTCGTAAATCACTGTGTGTTCCAGTTTCAGCTGCCAAAGTGCATAATCAGAAGCCTGCACCCCGAGGCCAAGCAAGTCGATTCTGTCGCAACTGTCGTAAGCCAGGACATCGTTTCAGTGATTGTCCTCTTCCAAGAACAGCAAAGGCAGTTCGTCGTGATTCACAAGTTACCAGCACTGCCCATGACACCAATCGACACCTGAATGTGCAACCTCCGCCTCAACGGATTATTGTCAAGGGCACCGTCAAAGGTCGCATTGTTCCACCGGCAATCGTTTCAAGCCTACAACACCAACGCCAGCAGGGTAAGCAATGCCAGGAGAACAACAGCTCGCTACAGCTACAAAGAGGCGGTACGCTCCTTCGTCAGCACCCGCAGCAAGTGTCGCCAGCACCAGGTCGCCCGACTATTGTCAGTTCTAGCAATGCACCTCGTATTGCTCCAATCTGGAGGCCCATCGACAAATCACCGCTCGGTGACCCCACGGGCAAGAAGATCCTACCCGTTACAGCTGACAAAACAGTTGCCCCTCCACCATCGAAGATCAACAAGCAGAGCAACGTTCCCGGTGAGACTTCTGGTAGTAGGAACTAA
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Protein seq | MEFGWALRRPMRLPDSPRHERGLPAALRGVGVKPEVWCAWLEGVMRRVLSRPLSVVKPWRINRQLRVCSEVKSSIKLHATKSGKQMVSVRGNFNGSGSRQFHGSTQLNSISFPRQPLKDQPQSQVMANQTQTVEELLQQMRHRYQIYLMQQMQQQCQEPRQVHQPQMQVQVLARNLNKSQSQEFPISAPKTPVKMLSRSLKITAAKLPSDQREVSATRYDCGEQGHYIRNCPWKVFARSPEKDEKQCPGSNQAPSQSTNKKDGTLQHSSGANRKVIRKMDNGRTMIITSSEFTPEDAARIPKRQRGRNTFRGARQLTRHLIKYGPPRPEDDISGERFSTDDDDDDDDDDDDEDEATLNSFMERGLEFKACTRCGIVGHTASLCLPTCRCGEYTHYSDACPLRKVTCFLCEGTDHAPKDCQLNAVIAKTKKEQGTTVQPIRQPMAVDNNSLNPSTLSPTTTPVEANHGRSNVAREVRKSLCVPVSAAKVHNQKPAPRGQASRFCRNCRKPGHRFSDCPLPRTAKAVRRDSQVTSTAHDTNRHLNVQPPPQRIIVKGTVKGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGGTLLRQHPQQVSPAPGRPTIVSSSNAPRIAPIWRPIDKSPLGDPTGKKILPVTADKTVAPPPSKINKQSNVPGETSGSRN
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0 | 0 | 0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g51890 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0016410 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0016410 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0016420 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0011050 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0010960 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0381300 | RBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0029790 | SBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0167400 | SBH | 0 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0016240 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0029860 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0016280 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0011370 | SBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0022640 | SBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G027730 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0028260 | RBH | 0.0 | 0.0 | 0.0 |