Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsN22_07G023130 | OGI:07070790 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr07:25187558-25194285 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATTGCTCACGCATTTCTCAGCACTTGCACAAACCAGTATTAACCTAAGCTGCCCACATTTGCATTAAATTGAATGTATAACCACCCCCAGCTTCAGAACTGACAGTTCTTAAGGGAAAAAAAAACAGTTTCTTGTCTGTTCTTCAGTAATCATCCTTTTGTCATTCAGAATTTCCCCATTTTTCTTGTTAGAAAACATGAGCCATCCTAGCTATCTACTAGAAGATTTGCTCTAACAACTCCAGAAAAACAATGTTGTGACTTTGTTAGTCTCTTCAAGGGACAAGGGTTTATGGGTGGGTGAACAGGTGAGCAGCCAGGTTGATCTCCACTTCTTTAATACCCTCTACTCCTTCCTCCCCCCTGAATCTCTCTGATTCTTTCTTGCTGACAAACACAATCCATCAAAGAAAAAACAAACATTTCATCAGAGAGAGAGAATCTACTAGCCTACTACTATACAAAGTTGGGGGGAAAGGGAGAGATTTTTGTTCATAGTTTGGGAACAAAGTTTAGTTCTTTTCTTGGGGGAGTCTCCAGGCGAATGTTGCAGCGGCCAAGGTAGGAATGAAGAGGAGGATGAGAGGAGGAGGAGGTGCAGCCATGGCCGTGGCCACTGGAGCTGTGATGCTGTTCTTGGCAGCTACTCTCTCTGGGGTTAGTGCCAACACAGACTCAGATGATGGTAAGTGATCTTTACTTGTTGTAAGTTGTAGCTAATGTATGTATGTTATATCTTGATTGGTGTGTTTTTTTGCTTGAGAAAATTTATCAAGAAACAGTGCAATGTTCTTGGTGGTTTGGTTTGTTTTGATTGTTTGATTGGCAAGAGGCTGGGAAATGGTTCTTGATTCTTCAGTTTGTTTTTGGTCAGTTCACTGCAGTGCTGCTCTAGGTGTACACATTTTTTTTTCAGATTTCTTGCAGTTTGGGGGGGGGGGGGGTGATAAAATGCCAGAGATTTGAACAAATTCAATTTTAGAATTAGTATAACACAAAGAACTGTGTGCAAATGAAAATTTGACAAGAAGCTGAAGATCATACAAGATACAGCCCCCCTTGAAATTTGATCGAAAGACTTACTACCATTAGTAAAGTTCAAAAGTTCCAGCGTCCATCCCTATGACAAACTGTCACACACAAATAGAATCAATCAGAGGAAGTATCAACCATCAAAGGCTTTGATTTGATGAACTGAACATAAGACAAATAAATTCGGGCAGAGGTTGGAAGCTAAGGGTGTGTTTAGTTCACGTCAAAAATGAAAGTTTGATTGAAATTGGAACGATGTGATGGAAATGTTGGAATTTTATGTATGTAGAAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTTGAAGAAAAAATTAGAAACTAAACCAGGCCTAAAAGCTACTTCCTCCATTTCAAAATGTTTGACACCGTTGACTTTTTAGTACGTGTTTGACCATTCGTCTTATTCAAAAAATTTAAGTAACTATTTATTCTTTTCATATTATTTGATTCATTGTTAAATATACTTTCATGTACACATATAGTTTTACATATTTTACAATTTTTTTTTGAATAAGATGACGGTCAAACATGTGCTAAAGAGTCAACGGTGTCAAACATTTTGAAACGGAGAGAGTATTAAATAGGGCTAGTATGAGAAAACTGTGTTTAAATAGGGACTACAGTGAAAATAAACCAGCACGCGTAGGCTCTGTAGCGATCAGAAACAGGGGCTTATCTGCATAATATTTTATCCATAGGGACCTATTTGCAAATTTCCTTCACTTCCATCTCCGGCGTCGCCGCGGCCGCGCCGCCGTCGGCCGAGCCTAACCTCGCCGTCGCCATCCACGCACCTTGCGCTCGCCTTTCCACCTAGTCAGCAAGTAGCTCCACGCCTCCACCCACCCACCACATGGGCACCGCCGCCGAATCCCGCACCACCGGCATCGTCGAACCCCACCTCCGTCAAGATCTCCGGCCAGCTCCTCCCCCAATCAAGTGGGATGCAGAGCAGCAGATGCATTGCATTTTTTATACATAATCTTGAGCTCCAACCATAGCATTTTAGCTATCCAAATTCCTCTTGGAACTGGAGATTTCGTGGGGAAAGTTTTCTAACACCAAAGTAGGAACAAACTATTGTTATGGTCAATTACCTGCAATTTTTGTTTCATCCAACATTGCTGATAATCCAAATCCTTTTTGTTTTTCATCTATACAGTGAATGCTCTCAATGTCTTGTACACAAGCATGAATTCTCCATCCCAGCTGACGAATTGGGTGTCACAAAATGGAGACCCCTGTGGACAGTCCTGGCTTGGGATCACTTGCTCGGGTTCCAGGGTGACAGCAATGTGAGTTTGAGCCTCTAAAAGGGGTCCTTTGTGAGTGACAAACTACTTAAACTTATTATCTGACATTGTTCCTGAATCCTCTGCAGAAAATTATCCGGCATGGGGATCAACGGGACTTTGGGCTACAACATGAATCTACTGACTTCACTAGTTGAACTGTTAGTGTGATCTCTTGGACAATATAGTCTCAATTCCTTGATAGTTACACAGTCTACATTTTGAGAGTGGTTTTGATCTATTTTTAGCTTTCTGCAGTGATACGAGCAAGAATAATCTTGGAGGCAGTGACATTCCTTATAACCTTCCTCCAAATCTTGAGAGATTGTGAGTTTCATGTCCACGCAACTCAAGTTCCTGCTGTTTTCATGTAAAATTATATTAAGTTCTCACAAAGAATTTTATGTGCAGAAACCTTGCAGAAAACAACTTCACCGGAAGCATACCATACTCTATATCGCAAATGATTGCACTTAGAATTTTGTAAGTTGGAGTTATTGTGCTCATTTCCTCAGTTTTTTTTTTGGGTAGACTCTGACAAAATTTTGTAACTATACTTTTCTGTTGTATACAGAAATCTTGGACATAATCATCTTGCAACCACCAATGATATGTTCAACCAGCTAACTAACCTAACAACATTGTGAGTGGTTTTCCTGTATTTTTGACTGCCCATACTTGCCTCGTTACCATATGGTTTGTTGTCTTATGTTCAGTAATCTGGCAAGCTAGTGGAAAAACTAAACCAGCTGTCCATTTCTCTCAGGGACCTTTCATACAACACACTTTCGGGTAATATTCCACAAAGCTTCAATTCCTTGACAAATTTGAGAAAACTGTGAGTACGGATGTGTTAATAGATTTTTCAGTTTTTCCGTTGACAAGAACAAAATTAATTTCATAATTTGTTTATAAAGGCAATATTTGCTCCTGTCAGTAATCTGCAGAACAACGGATTCAATGGCACAATAGATGTCCTTGCTGATCTTCCGCTTACTGACTTGTGAGTTGGCATGCATCTGCTAACCAACCTATTCTGATTTATAGTCGAATTCTAATAACACATTTGATTCTACTTCAGAAATGTTGCAAATAACCAATTCACCGGATGGATACCTGATAAGCTAAAGAAAATAAAGAATCTCCAGTAAGTACTTCTGTTACCAATATACTCACGATCTTGCAATTATAGACTTATTGGATGGATACCAACAATATTCTCCTCCTTTTGTAGGACAAATGGAAACTCGTTTGGAAGTGGTCCTTCACCACCACCTCCACCATATCAATCTCCACCTTATAAATCTCCTCCATACAAATCTCCGCAATCTCGACAACCTGCTCCTCCAACTACTACTGTTAACAATAATCCGTCTGATGATGGTCGCAAACACTCTAAACTAAGTGGTGGTGCCATAGCCGGAATTGTAGTATGTTTGGTAGTTGTGGGTGCAATAGTTGCATTCTTTGTGATCAAGAAGAAATATTGGTCATTGCCACGAGGAGGAGATCCTGAACAGAAGGAACCTCTCAGCCCTATTGTTTCAGGATTTAAAGACAGTCTTAAACGTAAGTTTCATGCTAATTGTCAGCTTTGGAATGATTTGCAAACAGTTGTGCAGCACTGCATTTCTTTTTTCTATGCTTATCATTTCTCTTTTGCATAGAGGTAAGTAATATGCTGTATTCCCATATCAAAACTACTCTTTTCAGAGATGAAGTCAATCAAGATCATCTCAACAATTGGCAAGGAAGAATTACAGAAAACTGTTTCAATGAATTTAAAACCTCCAACAAGAATTGACTTGCACAAGTCCATTGATGAAAATGATGTCACCAGCAAGTCTTTCACAAGGAAAATAAGTTTGAGTTCCATCAGAACACCTGCATACACTGTGGCAGACCTACAGGTGGCAACAGGCAGCTTCTGTGCTGACAATTTAATTGGAGAGGGGTTATTCGGTCGTGTTTACAAGGCGAAATTCAATGACCACAAGGTGCTTCCACAATTACCTCTTATCCTTACTTTTGAATCTTTTCCTTGCACCAAACAACCACTGTATTGTTTTTTTACTACCATAGAATCTGCAATTAAGTGGATGTGCTAAACTTGACATGCTAAATCTATATTGTCCTAGACAATAGGCTAAGATGATATGCATCAGTTGATCTATACCTGCTTGGAAATTTTTAGCTGTGGTAGCACGAAAGTGTTCCGTTTACATGATTATCTATGTCTACACACAATTTATGCTTGCATTACTACTGCCAGTCTTTCTTTCCTTCAATAAATAGAGAAAAATAAATCATTCTATCATATACAAGTACTCAATATTCTTAGTATATGGAATCATGACAAGTATTTACTGTCATTACAGGAGCATTGATTATATGTAATATAAGATGTGGCACTCTCATTTTCTTTACAAGTACCAACCTTTCCAAAAAAAAGGACTTATTTTTTCTGTTTGTTAAGATTATATAAAATTCAAGAAACAATTCACACCTTTGGTACTTTCAAATCATCATCCTGGCTACTGCATATTTCAGTCATCACCATTTCTTGTTACTTTCAGGTCCTGGCTGTGAAGAAAATCAATTTCTCTGCATTCCCGGGCCATCCTTCAGATTTGTTCATTGAGTTAGTTGCAAATATTTCAAGGTTAAATCATCCAAGCCTTTCTGAGTTAGTTGGCTACTGTTCAGAGCATGGGCAGTGCTTACTGGCATATGAGTTTTACCGAAATGGTTCTCTTAAAGACTTGCTTCATCTAGTGGATGATCAAAGCCAACCGTTGTCTTGGAATAGCCGTGTGAAGATTGCCCTTGGATCTGCGAGGGCATTAGAGTAAGTGAAACTGTGAAAGAAACGTGCAATTCTTCCCTCCTGTTTTAGAGCTGAAAATTCATGTCAATCATGTGAAACTTTCAGATATCTACATGAAACTTGTTCACCTTCCGTGATACACAAGAATTTCAAGTCATCCAATATTTTTCTGGATAACGAGCTAAATCCCCATCTTTCAGATTCTGGGTTTGCTGACCTTATTCCTAACCGGGAATCTCAGGTAACATATTAGGCATATATCCTCCAACTGTCTTACCGCTGTTTTACATGAATTTAAATCATGATTGATTGCCCGCAGAAATGCTTTACACTTTTTTTTGTTCATTGAAGTATCTAAAGCTCACTTTAGCATAATACTTCATGTGGTATATTGAGAAGATCAAAAAATGATTATTGAATAACATGATAAAATTTCAGGACCGACATACTCTGTACTAGTCCATGGTTACCTAGTATGTTATGACTGTATTTTGCAAATTTTGTTACTGAAAATGCTTATAAAAAAATTGGGGTCCCAAAATTTCTATCCAAACATACTTACATAACGACAATTTCAGGTGTCAGATGAGGACTCAGGATACAGGGCCCCTGAGGTGACCATGTCTGGCCAGTACTCCGTGAAGAGTGACGTGTACAGCTTCGGTGTTGTCATGCTAGAGCTCCTGACTGGCCGGAAACCTTTTGACAGGTGAACACACAGACACTGCACCATCACCATTTCTCCTCAATTTTTCTCAAGTTCTCAAACCTTGCACTGTTGCACAATCCTCTGAACTGAACTGAACTGAACTGTATTGCCCCTTGCTGTCTGAACATTTGCAGATCCCGGCCACGGTCGGAGCAGTCACTGGTCGGGTGGGCAACTCCCCAGCTGCACGACATCGACGCTTTGGACCAGATGGTCGACCCTGCACTCCAGGGGCTGTACCCTTCGAAATCGCTCTCCCGCTTCGCTGACGCGATCGCGCTCTGCGTTCAGGTCAGACCACCATGATCAGTGATCAGCCGATCACCTCCACATCAGCTTCTCCTTTGCTCCCCAAATGCTCCAGTTTTCTTTTTTTTCCATCTTTTGCACACTTCTGATCCTGCTTGCTCCTCAACCTTTTGTCGACAGTCCGAACCGGAGTTCAGGCCGCCGATGTCGGAGGTCGTCCAGTTGCTGGTCCGCCTTGTGCAGAGAGCCAACATGACGAGGATGTGCGGCGCCGACGGTCACTCATGGCGGCGCGACGGCGAATCCCGGGACCAAGAACCATGGTAAAGGGGAAGAAGATAAAATGCTGTATATAGGCGCGAGAGTGATGTGCTGTTCAAAGATGTTTCTTTGCTAGGTGAGTAGTTTTAAAAAAAAAGTTTGAAGTTTGATGATTTGGGCGTGAGCTTAGCAGCGCCCTGTGGCCTGTCACCTGTATGTGCACCAGTGCCAAACCAAGAAACGGATGCTGATTGTTCATGTGCTCGTCACACCTCATTGTCGACGAGCACAACAAATCTTTTCACTCGAGAAAAAAATAATACTCACTCCGTTCTCG
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CDS seq | ATGAAGAGGAGGATGAGAGGAGGAGGAGGTGCAGCCATGGCCGTGGCCACTGGAGCTGTGATGCTGTTCTTGGCAGCTACTCTCTCTGGGGTTAGTGCCAACACAGACTCAGATGATGTGAATGCTCTCAATGTCTTGTACACAAGCATGAATTCTCCATCCCAGCTGACGAATTGGGTGTCACAAAATGGAGACCCCTGTGGACAGTCCTGGCTTGGGATCACTTGCTCGGGTTCCAGGGTGACAGCAATAAAATTATCCGGCATGGGGATCAACGGGACTTTGGGCTACAACATGAATCTACTGACTTCACTAGTTGAACTTGATACGAGCAAGAATAATCTTGGAGGCAGTGACATTCCTTATAACCTTCCTCCAAATCTTGAGAGATTAAACCTTGCAGAAAACAACTTCACCGGAAGCATACCATACTCTATATCGCAAATGATTGCACTTAGAATTTTAAATCTTGGACATAATCATCTTGCAACCACCAATGATATGTTCAACCAGCTAACTAACCTAACAACATTGGACCTTTCATACAACACACTTTCGGGTAATATTCCACAAAGCTTCAATTCCTTGACAAATTTGAGAAAACTTAATCTGCAGAACAACGGATTCAATGGCACAATAGATGTCCTTGCTGATCTTCCGCTTACTGACTTAAATGTTGCAAATAACCAATTCACCGGATGGATACCTGATAAGCTAAAGAAAATAAAGAATCTCCAGACAAATGGAAACTCGTTTGGAAGTGGTCCTTCACCACCACCTCCACCATATCAATCTCCACCTTATAAATCTCCTCCATACAAATCTCCGCAATCTCGACAACCTGCTCCTCCAACTACTACTGTTAACAATAATCCGTCTGATGATGGTCGCAAACACTCTAAACTAAGTGGTGGTGCCATAGCCGGAATTGTAGTATGTTTGGTAGTTGTGGGTGCAATAGTTGCATTCTTTGTGATCAAGAAGAAATATTGGTCATTGCCACGAGGAGGAGATCCTGAACAGAAGGAACCTCTCAGCCCTATTGTTTCAGGATTTAAAGACAGTCTTAAACAGATGAAGTCAATCAAGATCATCTCAACAATTGGCAAGGAAGAATTACAGAAAACTGTTTCAATGAATTTAAAACCTCCAACAAGAATTGACTTGCACAAGTCCATTGATGAAAATGATGTCACCAGCAAGTCTTTCACAAGGAAAATAAGTTTGAGTTCCATCAGAACACCTGCATACACTGTGGCAGACCTACAGGTGGCAACAGGCAGCTTCTGTGCTGACAATTTAATTGGAGAGGGGTTATTCGGTCGTGTTTACAAGGCGAAATTCAATGACCACAAGGTCCTGGCTGTGAAGAAAATCAATTTCTCTGCATTCCCGGGCCATCCTTCAGATTTGTTCATTGAGTTAGTTGCAAATATTTCAAGGTTAAATCATCCAAGCCTTTCTGAGTTAGTTGGCTACTGTTCAGAGCATGGGCAGTGCTTACTGGCATATGAGTTTTACCGAAATGGTTCTCTTAAAGACTTGCTTCATCTAGTGGATGATCAAAGCCAACCGTTGTCTTGGAATAGCCGTGTGAAGATTGCCCTTGGATCTGCGAGGGCATTAGAATATCTACATGAAACTTGTTCACCTTCCGTGATACACAAGAATTTCAAGTCATCCAATATTTTTCTGGATAACGAGCTAAATCCCCATCTTTCAGATTCTGGGTTTGCTGACCTTATTCCTAACCGGGAATCTCAGGTGTCAGATGAGGACTCAGGATACAGGGCCCCTGAGGTGACCATGTCTGGCCAGTACTCCGTGAAGAGTGACGTGTACAGCTTCGGTGTTGTCATGCTAGAGCTCCTGACTGGCCGGAAACCTTTTGACAGATCCCGGCCACGGTCGGAGCAGTCACTGGTCGGGTGGGCAACTCCCCAGCTGCACGACATCGACGCTTTGGACCAGATGGTCGACCCTGCACTCCAGGGGCTGTACCCTTCGAAATCGCTCTCCCGCTTCGCTGACGCGATCGCGCTCTGCGTTCAGTCCGAACCGGAGTTCAGGCCGCCGATGTCGGAGGTCGTCCAGTTGCTGGTCCGCCTTGTGCAGAGAGCCAACATGACGAGGATGTGCGGCGCCGACGGTCACTCATGGCGGCGCGACGGCGAATCCCGGGACCAAGAACCATGGTAA
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Protein seq | MKRRMRGGGGAAMAVATGAVMLFLAATLSGVSANTDSDDVNALNVLYTSMNSPSQLTNWVSQNGDPCGQSWLGITCSGSRVTAIKLSGMGINGTLGYNMNLLTSLVELDTSKNNLGGSDIPYNLPPNLERLNLAENNFTGSIPYSISQMIALRILNLGHNHLATTNDMFNQLTNLTTLDLSYNTLSGNIPQSFNSLTNLRKLNLQNNGFNGTIDVLADLPLTDLNVANNQFTGWIPDKLKKIKNLQTNGNSFGSGPSPPPPPYQSPPYKSPPYKSPQSRQPAPPTTTVNNNPSDDGRKHSKLSGGAIAGIVVCLVVVGAIVAFFVIKKKYWSLPRGGDPEQKEPLSPIVSGFKDSLKQMKSIKIISTIGKEELQKTVSMNLKPPTRIDLHKSIDENDVTSKSFTRKISLSSIRTPAYTVADLQVATGSFCADNLIGEGLFGRVYKAKFNDHKVLAVKKINFSAFPGHPSDLFIELVANISRLNHPSLSELVGYCSEHGQCLLAYEFYRNGSLKDLLHLVDDQSQPLSWNSRVKIALGSARALEYLHETCSPSVIHKNFKSSNIFLDNELNPHLSDSGFADLIPNRESQVSDEDSGYRAPEVTMSGQYSVKSDVYSFGVVMLELLTGRKPFDRSRPRSEQSLVGWATPQLHDIDALDQMVDPALQGLYPSKSLSRFADAIALCVQSEPEFRPPMSEVVQLLVRLVQRANMTRMCGADGHSWRRDGESRDQEPW |
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Function | Protein STRUBBELIG-RECEPTOR FAMILY 7 [UniProtKB/Swiss-Prot:Q9LUL4] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_07G023130 | OsN22_07G023130_02 | Chr07 | 25187558 | 25194285 | + | NAM | ||
CDS seq | ATGAAGAGGAGGATGAGAGGAGGAGGAGGTGCAGCCATGGCCGTGGCCACTGGAGCTGTGATGCTGTTCTTGGCAGCTACTCTCTCTGGGGTTAGTGCCAACACAGACTCAGATGATGTGAATGCTCTCAATGTCTTGTACACAAGCATGAATTCTCCATCCCAGCTGACGAATTGGGTGTCACAAAATGGAGACCCCTGTGGACAGTCCTGGCTTGGGATCACTTGCTCGGGTTCCAGGGTGACAGCAATAAAATTATCCGGCATGGGGATCAACGGGACTTTGGGCTACAACATGAATCTACTGACTTCACTAGTTGAACTTGATACGAGCAAGAATAATCTTGGAGGCAGTGACATTCCTTATAACCTTCCTCCAAATCTTGAGAGATTAAACCTTGCAGAAAACAACTTCACCGGAAGCATACCATACTCTATATCGCAAATGATTGCACTTAGAATTTTAAATCTTGGACATAATCATCTTGCAACCACCAATGATATGTTCAACCAGCTAACTAACCTAACAACATTTAATCTGCAGAACAACGGATTCAATGGCACAATAGATGTCCTTGCTGATCTTCCGCTTACTGACTTAAATGTTGCAAATAACCAATTCACCGGATGGATACCTGATAAGCTAAAGAAAATAAAGAATCTCCAGACAAATGGAAACTCGTTTGGAAGTGGTCCTTCACCACCACCTCCACCATATCAATCTCCACCTTATAAATCTCCTCCATACAAATCTCCGCAATCTCGACAACCTGCTCCTCCAACTACTACTGTTAACAATAATCCGTCTGATGATGGTCGCAAACACTCTAAACTAAGTGGTGGTGCCATAGCCGGAATTGTAGTATGTTTGGTAGTTGTGGGTGCAATAGTTGCATTCTTTGTGATCAAGAAGAAATATTGGTCATTGCCACGAGGAGGAGATCCTGAACAGAAGGAACCTCTCAGCCCTATTGTTTCAGGATTTAAAGACAGTCTTAAACAGATGAAGTCAATCAAGATCATCTCAACAATTGGCAAGGAAGAATTACAGAAAACTGTTTCAATGAATTTAAAACCTCCAACAAGAATTGACTTGCACAAGTCCATTGATGAAAATGATGTCACCAGCAAGTCTTTCACAAGGAAAATAAGTTTGAGTTCCATCAGAACACCTGCATACACTGTGGCAGACCTACAGGTGGCAACAGGCAGCTTCTGTGCTGACAATTTAATTGGAGAGGGGTTATTCGGTCGTGTTTACAAGGCGAAATTCAATGACCACAAGGTCCTGGCTGTGAAGAAAATCAATTTCTCTGCATTCCCGGGCCATCCTTCAGATTTGTTCATTGAGTTAGTTGCAAATATTTCAAGGTTAAATCATCCAAGCCTTTCTGAGTTAGTTGGCTACTGTTCAGAGCATGGGCAGTGCTTACTGGCATATGAGTTTTACCGAAATGGTTCTCTTAAAGACTTGCTTCATCTAGTGGATGATCAAAGCCAACCGTTGTCTTGGAATAGCCGTGTGAAGATTGCCCTTGGATCTGCGAGGGCATTAGAATATCTACATGAAACTTGTTCACCTTCCGTGATACACAAGAATTTCAAGTCATCCAATATTTTTCTGGATAACGAGCTAAATCCCCATCTTTCAGATTCTGGGTTTGCTGACCTTATTCCTAACCGGGAATCTCAGGTGTCAGATGAGGACTCAGGATACAGGGCCCCTGAGGTGACCATGTCTGGCCAGTACTCCGTGAAGAGTGACGTGTACAGCTTCGGTGTTGTCATGCTAGAGCTCCTGACTGGCCGGAAACCTTTTGACAGATCCCGGCCACGGTCGGAGCAGTCACTGGTCGGGTGGGCAACTCCCCAGCTGCACGACATCGACGCTTTGGACCAGATGGTCGACCCTGCACTCCAGGGGCTGTACCCTTCGAAATCGCTCTCCCGCTTCGCTGACGCGATCGCGCTCTGCGTTCAGTCCGAACCGGAGTTCAGGCCGCCGATGTCGGAGGTCGTCCAGTTGCTGGTCCGCCTTGTGCAGAGAGCCAACATGACGAGGATGTGCGGCGCCGACGGTCACTCATGGCGGCGCGACGGCGAATCCCGGGACCAAGAACCATGGTAA
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Protein seq | MKRRMRGGGGAAMAVATGAVMLFLAATLSGVSANTDSDDVNALNVLYTSMNSPSQLTNWVSQNGDPCGQSWLGITCSGSRVTAIKLSGMGINGTLGYNMNLLTSLVELDTSKNNLGGSDIPYNLPPNLERLNLAENNFTGSIPYSISQMIALRILNLGHNHLATTNDMFNQLTNLTTFNLQNNGFNGTIDVLADLPLTDLNVANNQFTGWIPDKLKKIKNLQTNGNSFGSGPSPPPPPYQSPPYKSPPYKSPQSRQPAPPTTTVNNNPSDDGRKHSKLSGGAIAGIVVCLVVVGAIVAFFVIKKKYWSLPRGGDPEQKEPLSPIVSGFKDSLKQMKSIKIISTIGKEELQKTVSMNLKPPTRIDLHKSIDENDVTSKSFTRKISLSSIRTPAYTVADLQVATGSFCADNLIGEGLFGRVYKAKFNDHKVLAVKKINFSAFPGHPSDLFIELVANISRLNHPSLSELVGYCSEHGQCLLAYEFYRNGSLKDLLHLVDDQSQPLSWNSRVKIALGSARALEYLHETCSPSVIHKNFKSSNIFLDNELNPHLSDSGFADLIPNRESQVSDEDSGYRAPEVTMSGQYSVKSDVYSFGVVMLELLTGRKPFDRSRPRSEQSLVGWATPQLHDIDALDQMVDPALQGLYPSKSLSRFADAIALCVQSEPEFRPPMSEVVQLLVRLVQRANMTRMCGADGHSWRRDGESRDQEPW
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_07G023130 | OsN22_07G023130_01 | Chr07 | 25187558 | 25194285 | + | NAM | ||
CDS seq | ATGAAGAGGAGGATGAGAGGAGGAGGAGGTGCAGCCATGGCCGTGGCCACTGGAGCTGTGATGCTGTTCTTGGCAGCTACTCTCTCTGGGGTTAGTGCCAACACAGACTCAGATGATGTGAATGCTCTCAATGTCTTGTACACAAGCATGAATTCTCCATCCCAGCTGACGAATTGGGTGTCACAAAATGGAGACCCCTGTGGACAGTCCTGGCTTGGGATCACTTGCTCGGGTTCCAGGGTGACAGCAATAAAATTATCCGGCATGGGGATCAACGGGACTTTGGGCTACAACATGAATCTACTGACTTCACTAGTTGAACTTGATACGAGCAAGAATAATCTTGGAGGCAGTGACATTCCTTATAACCTTCCTCCAAATCTTGAGAGATTAAACCTTGCAGAAAACAACTTCACCGGAAGCATACCATACTCTATATCGCAAATGATTGCACTTAGAATTTTAAATCTTGGACATAATCATCTTGCAACCACCAATGATATGTTCAACCAGCTAACTAACCTAACAACATTGGACCTTTCATACAACACACTTTCGGGTAATATTCCACAAAGCTTCAATTCCTTGACAAATTTGAGAAAACTTAATCTGCAGAACAACGGATTCAATGGCACAATAGATGTCCTTGCTGATCTTCCGCTTACTGACTTAAATGTTGCAAATAACCAATTCACCGGATGGATACCTGATAAGCTAAAGAAAATAAAGAATCTCCAGACAAATGGAAACTCGTTTGGAAGTGGTCCTTCACCACCACCTCCACCATATCAATCTCCACCTTATAAATCTCCTCCATACAAATCTCCGCAATCTCGACAACCTGCTCCTCCAACTACTACTGTTAACAATAATCCGTCTGATGATGGTCGCAAACACTCTAAACTAAGTGGTGGTGCCATAGCCGGAATTGTAGTATGTTTGGTAGTTGTGGGTGCAATAGTTGCATTCTTTGTGATCAAGAAGAAATATTGGTCATTGCCACGAGGAGGAGATCCTGAACAGAAGGAACCTCTCAGCCCTATTGTTTCAGGATTTAAAGACAGTCTTAAACAGATGAAGTCAATCAAGATCATCTCAACAATTGGCAAGGAAGAATTACAGAAAACTGTTTCAATGAATTTAAAACCTCCAACAAGAATTGACTTGCACAAGTCCATTGATGAAAATGATGTCACCAGCAAGTCTTTCACAAGGAAAATAAGTTTGAGTTCCATCAGAACACCTGCATACACTGTGGCAGACCTACAGGTGGCAACAGGCAGCTTCTGTGCTGACAATTTAATTGGAGAGGGGTTATTCGGTCGTGTTTACAAGGCGAAATTCAATGACCACAAGGTCCTGGCTGTGAAGAAAATCAATTTCTCTGCATTCCCGGGCCATCCTTCAGATTTGTTCATTGAGTTAGTTGCAAATATTTCAAGGTTAAATCATCCAAGCCTTTCTGAGTTAGTTGGCTACTGTTCAGAGCATGGGCAGTGCTTACTGGCATATGAGTTTTACCGAAATGGTTCTCTTAAAGACTTGCTTCATCTAGTGGATGATCAAAGCCAACCGTTGTCTTGGAATAGCCGTGTGAAGATTGCCCTTGGATCTGCGAGGGCATTAGAATATCTACATGAAACTTGTTCACCTTCCGTGATACACAAGAATTTCAAGTCATCCAATATTTTTCTGGATAACGAGCTAAATCCCCATCTTTCAGATTCTGGGTTTGCTGACCTTATTCCTAACCGGGAATCTCAGGTGTCAGATGAGGACTCAGGATACAGGGCCCCTGAGGTGACCATGTCTGGCCAGTACTCCGTGAAGAGTGACGTGTACAGCTTCGGTGTTGTCATGCTAGAGCTCCTGACTGGCCGGAAACCTTTTGACAGATCCCGGCCACGGTCGGAGCAGTCACTGGTCGGGTGGGCAACTCCCCAGCTGCACGACATCGACGCTTTGGACCAGATGGTCGACCCTGCACTCCAGGGGCTGTACCCTTCGAAATCGCTCTCCCGCTTCGCTGACGCGATCGCGCTCTGCGTTCAGTCCGAACCGGAGTTCAGGCCGCCGATGTCGGAGGTCGTCCAGTTGCTGGTCCGCCTTGTGCAGAGAGCCAACATGACGAGGATGTGCGGCGCCGACGGTCACTCATGGCGGCGCGACGGCGAATCCCGGGACCAAGAACCATGGTAA
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Protein seq | MKRRMRGGGGAAMAVATGAVMLFLAATLSGVSANTDSDDVNALNVLYTSMNSPSQLTNWVSQNGDPCGQSWLGITCSGSRVTAIKLSGMGINGTLGYNMNLLTSLVELDTSKNNLGGSDIPYNLPPNLERLNLAENNFTGSIPYSISQMIALRILNLGHNHLATTNDMFNQLTNLTTLDLSYNTLSGNIPQSFNSLTNLRKLNLQNNGFNGTIDVLADLPLTDLNVANNQFTGWIPDKLKKIKNLQTNGNSFGSGPSPPPPPYQSPPYKSPPYKSPQSRQPAPPTTTVNNNPSDDGRKHSKLSGGAIAGIVVCLVVVGAIVAFFVIKKKYWSLPRGGDPEQKEPLSPIVSGFKDSLKQMKSIKIISTIGKEELQKTVSMNLKPPTRIDLHKSIDENDVTSKSFTRKISLSSIRTPAYTVADLQVATGSFCADNLIGEGLFGRVYKAKFNDHKVLAVKKINFSAFPGHPSDLFIELVANISRLNHPSLSELVGYCSEHGQCLLAYEFYRNGSLKDLLHLVDDQSQPLSWNSRVKIALGSARALEYLHETCSPSVIHKNFKSSNIFLDNELNPHLSDSGFADLIPNRESQVSDEDSGYRAPEVTMSGQYSVKSDVYSFGVVMLELLTGRKPFDRSRPRSEQSLVGWATPQLHDIDALDQMVDPALQGLYPSKSLSRFADAIALCVQSEPEFRPPMSEVVQLLVRLVQRANMTRMCGADGHSWRRDGESRDQEPW
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_07G023130 | OsN22_07G023130_03 | Chr07 | 25189315 | 25194285 | + | NAM | ||
CDS seq | ATGAATTCTCCATCCCAGCTGACGAATTGGGTGTCACAAAATGGAGACCCCTGTGGACAGTCCTGGCTTGGGATCACTTGCTCGGGTTCCAGGGTGACAGCAATAAAATTATCCGGCATGGGGATCAACGGGACTTTGGGCTACAACATGAATCTACTGACTTCACTAGTTGAACTTGATACGAGCAAGAATAATCTTGGAGGCAGTGACATTCCTTATAACCTTCCTCCAAATCTTGAGAGATTAAACCTTGCAGAAAACAACTTCACCGGAAGCATACCATACTCTATATCGCAAATGATTGCACTTAGAATTTTAAATCTTGGACATAATCATCTTGCAACCACCAATGATATGTTCAACCAGCTAACTAACCTAACAACATTTAATCTGCAGAACAACGGATTCAATGGCACAATAGATGTCCTTGCTGATCTTCCGCTTACTGACTTAAATGTTGCAAATAACCAATTCACCGGATGGATACCTGATAAGCTAAAGAAAATAAAGAATCTCCAGACAAATGGAAACTCGTTTGGAAGTGGTCCTTCACCACCACCTCCACCATATCAATCTCCACCTTATAAATCTCCTCCATACAAATCTCCGCAATCTCGACAACCTGCTCCTCCAACTACTACTGTTAACAATAATCCGTCTGATGATGGTCGCAAACACTCTAAACTAAGTGGTGGTGCCATAGCCGGAATTGTAGTATGTTTGGTAGTTGTGGGTGCAATAGTTGCATTCTTTGTGATCAAGAAGAAATATTGGTCATTGCCACGAGGAGGAGATCCTGAACAGAAGGAACCTCTCAGCCCTATTGTTTCAGGATTTAAAGACAGTCTTAAACAGATGAAGTCAATCAAGATCATCTCAACAATTGGCAAGGAAGAATTACAGAAAACTGTTTCAATGAATTTAAAACCTCCAACAAGAATTGACTTGCACAAGTCCATTGATGAAAATGATGTCACCAGCAAGTCTTTCACAAGGAAAATAAGTTTGAGTTCCATCAGAACACCTGCATACACTGTGGCAGACCTACAGGTGGCAACAGGCAGCTTCTGTGCTGACAATTTAATTGGAGAGGGGTTATTCGGTCGTGTTTACAAGGCGAAATTCAATGACCACAAGGTCCTGGCTGTGAAGAAAATCAATTTCTCTGCATTCCCGGGCCATCCTTCAGATTTGTTCATTGAGTTAGTTGCAAATATTTCAAGGTTAAATCATCCAAGCCTTTCTGAGTTAGTTGGCTACTGTTCAGAGCATGGGCAGTGCTTACTGGCATATGAGTTTTACCGAAATGGTTCTCTTAAAGACTTGCTTCATCTAGTGGATGATCAAAGCCAACCGTTGTCTTGGAATAGCCGTGTGAAGATTGCCCTTGGATCTGCGAGGGCATTAGAATATCTACATGAAACTTGTTCACCTTCCGTGATACACAAGAATTTCAAGTCATCCAATATTTTTCTGGATAACGAGCTAAATCCCCATCTTTCAGATTCTGGGTTTGCTGACCTTATTCCTAACCGGGAATCTCAGGTGTCAGATGAGGACTCAGGATACAGGGCCCCTGAGGTGACCATGTCTGGCCAGTACTCCGTGAAGAGTGACGTGTACAGCTTCGGTGTTGTCATGCTAGAGCTCCTGACTGGCCGGAAACCTTTTGACAGATCCCGGCCACGGTCGGAGCAGTCACTGGTCGGGTGGGCAACTCCCCAGCTGCACGACATCGACGCTTTGGACCAGATGGTCGACCCTGCACTCCAGGGGCTGTACCCTTCGAAATCGCTCTCCCGCTTCGCTGACGCGATCGCGCTCTGCGTTCAGTCCGAACCGGAGTTCAGGCCGCCGATGTCGGAGGTCGTCCAGTTGCTGGTCCGCCTTGTGCAGAGAGCCAACATGACGAGGATGTGCGGCGCCGACGGTCACTCATGGCGGCGCGACGGCGAATCCCGGGACCAAGAACCATGGTAA
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Protein seq | MNSPSQLTNWVSQNGDPCGQSWLGITCSGSRVTAIKLSGMGINGTLGYNMNLLTSLVELDTSKNNLGGSDIPYNLPPNLERLNLAENNFTGSIPYSISQMIALRILNLGHNHLATTNDMFNQLTNLTTFNLQNNGFNGTIDVLADLPLTDLNVANNQFTGWIPDKLKKIKNLQTNGNSFGSGPSPPPPPYQSPPYKSPPYKSPQSRQPAPPTTTVNNNPSDDGRKHSKLSGGAIAGIVVCLVVVGAIVAFFVIKKKYWSLPRGGDPEQKEPLSPIVSGFKDSLKQMKSIKIISTIGKEELQKTVSMNLKPPTRIDLHKSIDENDVTSKSFTRKISLSSIRTPAYTVADLQVATGSFCADNLIGEGLFGRVYKAKFNDHKVLAVKKINFSAFPGHPSDLFIELVANISRLNHPSLSELVGYCSEHGQCLLAYEFYRNGSLKDLLHLVDDQSQPLSWNSRVKIALGSARALEYLHETCSPSVIHKNFKSSNIFLDNELNPHLSDSGFADLIPNRESQVSDEDSGYRAPEVTMSGQYSVKSDVYSFGVVMLELLTGRKPFDRSRPRSEQSLVGWATPQLHDIDALDQMVDPALQGLYPSKSLSRFADAIALCVQSEPEFRPPMSEVVQLLVRLVQRANMTRMCGADGHSWRRDGESRDQEPW
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_07G023130 | OsN22_07G023130_04 | Chr07 | 25189329 | 25194285 | + | NAM | ||
CDS seq | ATGAATGCTCTCAATGTCTTGTACACAAGCATGAATTCTCCATCCCAGCTGACGAATTGGGTGTCACAAAATGGAGACCCCTGTGGACAGTCCTGGCTTGGGATCACTTGCTCGGGTTCCAGGGTGACAGCAATAAAATTATCCGGCATGGGGATCAACGGGACTTTGGGCTACAACATGAATCTACTGACTTCACTAGTTGAACTTGATACGAGCAAGAATAATCTTGGAGGCAGTGACATTCCTTATAACCTTCCTCCAAATCTTGAGAGATTAAACCTTGCAGAAAACAACTTCACCGGAAGCATACCATACTCTATATCGCAAATGATTGCACTTAGAATTTTAAATCTTGGACATAATCATCTTGCAACCACCAATGATATGTTCAACCAGCTAACTAACCTAACAACATTTAATCTGCAGAACAACGGATTCAATGGCACAATAGATGTCCTTGCTGATCTTCCGCTTACTGACTTAAATGTTGCAAATAACCAATTCACCGGATGGATACCTGATAAGCTAAAGAAAATAAAGAATCTCCAGACAAATGGAAACTCGTTTGGAAGTGGTCCTTCACCACCACCTCCACCATATCAATCTCCACCTTATAAATCTCCTCCATACAAATCTCCGCAATCTCGACAACCTGCTCCTCCAACTACTACTGTTAACAATAATCCGTCTGATGATGGTCGCAAACACTCTAAACTAAGTGGTGGTGCCATAGCCGGAATTGTAGTATGTTTGGTAGTTGTGGGTGCAATAGTTGCATTCTTTGTGATCAAGAAGAAATATTGGTCATTGCCACGAGGAGGAGATCCTGAACAGAAGGAACCTCTCAGCCCTATTGTTTCAGGATTTAAAGACAGTCTTAAACAGATGAAGTCAATCAAGATCATCTCAACAATTGGCAAGGAAGAATTACAGAAAACTGTTTCAATGAATTTAAAACCTCCAACAAGAATTGACTTGCACAAGTCCATTGATGAAAATGATGTCACCAGCAAGTCTTTCACAAGGAAAATAAGTTTGAGTTCCATCAGAACACCTGCATACACTGTGGCAGACCTACAGGTGGCAACAGGCAGCTTCTGTGCTGACAATTTAATTGGAGAGGGGTTATTCGGTCGTGTTTACAAGGCGAAATTCAATGACCACAAGGTCCTGGCTGTGAAGAAAATCAATTTCTCTGCATTCCCGGGCCATCCTTCAGATTTGTTCATTGAGTTAGTTGCAAATATTTCAAGGTTAAATCATCCAAGCCTTTCTGAGTTAGTTGGCTACTGTTCAGAGCATGGGCAGTGCTTACTGGCATATGAGTTTTACCGAAATGGTTCTCTTAAAGACTTGCTTCATCTAGTGGATGATCAAAGCCAACCGTTGTCTTGGAATAGCCGTGTGAAGATTGCCCTTGGATCTGCGAGGGCATTAGAATATCTACATGAAACTTGTTCACCTTCCGTGATACACAAGAATTTCAAGTCATCCAATATTTTTCTGGATAACGAGCTAAATCCCCATCTTTCAGATTCTGGGTTTGCTGACCTTATTCCTAACCGGGAATCTCAGGTGTCAGATGAGGACTCAGGATACAGGGCCCCTGAGGTGACCATGTCTGGCCAGTACTCCGTGAAGAGTGACGTGTACAGCTTCGGTGTTGTCATGCTAGAGCTCCTGACTGGCCGGAAACCTTTTGACAGATCCCGGCCACGGTCGGAGCAGTCACTGGTCGGGTGGGCAACTCCCCAGCTGCACGACATCGACGCTTTGGACCAGATGGTCGACCCTGCACTCCAGGGGCTGTACCCTTCGAAATCGCTCTCCCGCTTCGCTGACGCGATCGCGCTCTGCGTTCAGTCCGAACCGGAGTTCAGGCCGCCGATGTCGGAGGTCGTCCAGTTGCTGGTCCGCCTTGTGCAGAGAGCCAACATGACGAGGATGTGCGGCGCCGACGGTCACTCATGGCGGCGCGACGGCGAATCCCGGGACCAAGAACCATGGTAA
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Protein seq | MNALNVLYTSMNSPSQLTNWVSQNGDPCGQSWLGITCSGSRVTAIKLSGMGINGTLGYNMNLLTSLVELDTSKNNLGGSDIPYNLPPNLERLNLAENNFTGSIPYSISQMIALRILNLGHNHLATTNDMFNQLTNLTTFNLQNNGFNGTIDVLADLPLTDLNVANNQFTGWIPDKLKKIKNLQTNGNSFGSGPSPPPPPYQSPPYKSPPYKSPQSRQPAPPTTTVNNNPSDDGRKHSKLSGGAIAGIVVCLVVVGAIVAFFVIKKKYWSLPRGGDPEQKEPLSPIVSGFKDSLKQMKSIKIISTIGKEELQKTVSMNLKPPTRIDLHKSIDENDVTSKSFTRKISLSSIRTPAYTVADLQVATGSFCADNLIGEGLFGRVYKAKFNDHKVLAVKKINFSAFPGHPSDLFIELVANISRLNHPSLSELVGYCSEHGQCLLAYEFYRNGSLKDLLHLVDDQSQPLSWNSRVKIALGSARALEYLHETCSPSVIHKNFKSSNIFLDNELNPHLSDSGFADLIPNRESQVSDEDSGYRAPEVTMSGQYSVKSDVYSFGVVMLELLTGRKPFDRSRPRSEQSLVGWATPQLHDIDALDQMVDPALQGLYPSKSLSRFADAIALCVQSEPEFRPPMSEVVQLLVRLVQRANMTRMCGADGHSWRRDGESRDQEPW
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
SE | Chr07 | 25190545 | 25190840 | + | OsN22_07G023130_01 | OsN22_07G023130_03,OsN22_07G023130_02,OsN22_07G023130_04,OsN22_07G023130_01 | All |
A5 | Chr07 | 25189528 | 25189773 | + | OsN22_07G023130_04 | OsN22_07G023130_03,OsN22_07G023130_04 | All |
AF | Chr07 | 25187558 | 25189773 | + | OsN22_07G023130_01,OsN22_07G023130_02 | OsN22_07G023130_03,OsN22_07G023130_02,OsN22_07G023130_01 | All |
AF | Chr07 | 25187558 | 25189773 | + | OsN22_07G023130_01,OsN22_07G023130_02 | OsN22_07G023130_02,OsN22_07G023130_04,OsN22_07G023130_01 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 0.103112 | 0.0 | 0.347024 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0618400 | RBH | 0.0 | 0.0 | 0.945336 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g42626 | RBH | 0.0 | 0.0 | 0.323769 |
Nipponbare | IRGSP 1.0 | RAP-db | Os07g0618400 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0023440 | RBH | 0.062574 | 9.610022 | 2.310321 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0023500 | RBH | 0.025766 | 0.000000 | 0.359718 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0023360 | RBH | 0.0 | 4.753766 | 1.237726 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0023290 | RBH | 0.000000 | 0.058158 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0023390 | RBH | 4.591543 | 2.779434 | 1.105016 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0418100 | RBH | 1.697858 | 3.8116715 | 1.7867355 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0023910 | RBH | 0.000000 | 0.184851 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0428600 | RBH | 1.399532 | 1.310599 | 3.7817865 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0023170 | RBH | 0.045929 | 0.078455 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0023320 | RBH | 0.0 | 1.187018 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0023210 | RBH | 1.551350 | 11.241179 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0023420 | RBH | 0.121386 | 0.459814 | 0.163367 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0023170 | RBH | 0.037987 | 4.032367 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G020430 | RBH | 0.156431 | 2.621918 | 4.963098 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0023130 | RBH | 0.000000 | 3.901871 | 0.526639 |