Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_07G021820 OGI:07006270 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr07:24250679-24256237
Gene Symbol GATA23, OsGATA23, OsGATA23a, OsGATA23b
DNA seq

ATGGAAGAAATTGAGGAGGACGATTTCATCAGAAGAGAGAATGAAGTGGAAGAATTTGAAGAGGAGGATTTCAACAGAAAAGACAAACACACGAGCAACAATTTGTTCAAAAAAAAACAGCTAAATATTCAGCCCAGATTGAATCTAACCTTTGATTTGTGATTTATGCTGTTTTGTTCTCCAGATCAACTCTTTTCCAGTTTTGATTTGCAAATGGAACACTTGTGAGACTACAGGAAATTGTTTTCCCAGATCAACTACATGAGTTTGCTTCTTTGTTTTGTATTCAAAACCTGAAAAAAAAAACAAGTGAATTTCATTTTGATCAGATTCATATAAAAAGTGAACCTCAGAAAAACAAACAGTTCACAAAAACAATACATGATCCTTTGGACATGTTGGTTCCATACTGTGTGCAGTAAATATATGATCCTTTTGAACATATAAGCACAAGCACAAAAAGTCAAAATAGAGCAGAATCAAATTCTGTTTCATAACCTTCAGTAATTGATTTGAATTTTCACATAAGATTTTGTTCTCTTGCAGGATTTACAGGAAATGATGGTAGAAGAAGCAATTCTTTGGATGAACCAATCACGGGTAATAGCTCATATAAAAAACAACATATATATACATTATATTAAATCTTATAGGCCTCACATACAATATTTAGTTTGACATATGATCAATTTGACACAGGTCAATTTGGTATTGATTCTAAATTCTGGTTGACTAATTTCTAATCTATATTAACAATTTGATTTTGGTCTATTGCAGGAATCACAGGAATTGATGTTGGAAGAAGCATTTCTTTGGATGAACCAATCACAGGTAACAGATCACATCAAATAGAAACAAAATCGATGGAAAATCAAAATTTGCAGTCCCTTACAGTCAATTTCTAATAGAATTACAATATAATTAAACTGGAACTACAATTAGTTTGTACTGTAAATCCAAGTTTTGTCATACAAAGATGTGTTTACATTGAGATAGATTACTATACCACTGACTTTGCCTATAGTAAAAATCAACCCTAGAAAATAATTTGTATAATGAAAGCAAGTTTCCTGTTAAAATACTTTTTTTTTTATTTTTGTGTCATTATAGTTATACAGAATCAGATTACAAAATTATCAAAGATCTTCAGACATTACCAAACAAGCAAAAATCAAATACAACACAGTACATCAAAATACTCTGCATTTCAATTTAGTGTTATTTAATTTGACATATGATCAATTTGACACATGTCAATTTAATATTGATTCTAAATTCTGGTTGACTAATTGCTTATCTATATCAACAATTTGATTTTGGTTTATTACAGGAATCACAGGAATTGATGTTGGAAGAAGCATTTCTTTGGATGAACAAATCACAGGTAACAGATGCATCAAATAGAAACAAAATTGATGGAAATTCAAAATTTGCAGTCCCTTACAGTCAATTTCTAATAGAATTACAGTATAATTAAACTGGAACTACAATTAGTTTGTACTGTAAATTCAATTTTTGTCATTCAAAGATGTGTTTACATTGAGATAGATGCAAAAGCTACTATACCACTGACTTTGCCTATAGTAAAAATCAACCCTAGAAAATAATTTGTATAATGAATGAAAGTTGCCTGTAAAGCAAGTTGCTAGAATATATCAAATTTGGAGAAATTAACAATATTTGCTAGAAATTCATATTTCCTTGAGTTAACTGAACAAATTCAAAAATTACAGTGACTTTCTAATAGAATTACGGTACATATAATCTGTAAGTACAAGTTTGTACTATAAATCCAATTTTAGTGTATGAAGAATGAATTACTGTACCATTGTCTTCCAATTATAGTGTACCACATATGAAAACTATTAGCACTTGATCAAAAAAAGGAATCTACATTCAAGAAAAATTGACAAACAAAATTACCAATCTAGCTCACATTATATTAGCTAAAATACAAAAATACATTTTATTAGTATAACTGAATAATATAAAATGCTAACAGATATAAAAAAAAGATTTCAAAACTCCGCATATAACCAGACAAGAAGTTCAATCATTCTTTTCACATAGGGTGATTAATCAATCACAGGTAAAGATTTTATTTCAGCACAACAATCATGCAAAAAAAAAAACAACAGTTTTATGTGAGCATAGTTATATTGATCCGTTAATTGAAAACAGTTTTTGTCAAAAGTTACAGTCAATTTCTGCAAAATTACATATGTGTAATACTGTAATTCCAATATAAATTTTCTGTAACTTATAATACTTGTTATTTTTGTGAACATGTATTTCTGAAGTTCAGCAATATGGTATTTTTGATGACTTAGCTATGTTGGAGCAAAACAATGCTTTTGTAAGTATGATTAGGTTTGTCATTTGATTTTATGATCAGGCTTGCATTGTACTATGCTCTAATTTGTTTTTGTTAAACTAGATTGGTTACTCATCATACACAAGTTTAATGGAACATATTATAAGTTCACAACCGAGAGACTTTGAAACACAGGTTTGAATTATTTTCACTATTCTTTTGATTAAATTTTTAAAATATGCAGCATGATTTGGGTAAATGTTGTAAAACTGCGTGAGTTGGTAATTAATATGACTATGTCCATATTTGAAATATGCAGCATGAAGTGGGTGAATGTTCTAAACAATCAGAATAGAAAGAGAAGAAAATTCAAATTCAAACTGTAATGGTGATGTTTTCAATTTAGAACATGGACATATGGTGAGTTATACAGTAAAATATGAGTTTCTTGTAATTTATATGTCTAATTTTTTTTAGTTTTATATTATAGAATGCAAGTTATATGAAATTTGTGTTAAAATTGCAGATTGAAGAAGTTGAATATTCTAAACATTCAGAAGATAATGATATAGATATTGAAGATGATTCAAATTGGTCGCTTGATATTTTCAATTTAGATGATGGTCATATGGTAAGATATATCAAAGATAACTGATTTATTCATATTATTGTATATATGAATAAATGATGAATTTTTTTTCAATGTACAATACTTTTGAATAATTTTTACATTTATAAAATCTTAATACCATGCATTTAAATTTACAAATTTTTAACTTGAAAAATAACAAATTTGAAAACATCTATAATTTAGCTATTGATTGATCTATCGCTGGATTAAAACAAGTTTTGACAAATTAACAATATTGTGACATAGAAATGCAAAAAATTCCTTGAGTTAGCTGAACTAATTTAAAAATTACGGTGAAATTCTAATAAAATTACAATACATATAAACTGTAACTACAATATGTTAGTACTGTAAATGCAAATTTAGTTTGAAATATGTATTACTATACCACTATCTTTTTGATTATGAAAACTATTGATTATGTATTACTGCACCACATATGAAAACTATTTGCACTAGATCAAAAAAAATGATATTAACAAAAATTGACAACCAAAAAGGCCAATCTAGTCAACATGATATTACATTTTTGCATTTACAGTACTTTTGAATAATTTTTACAGCTATTGTTGTTTTATGTTGTTCAAAGGCTCAAACAGGTTCAGCAAATAATCAAGGACACATTGGTGAAGCAGGTGTTGAACAAAATTTAGATGTACAAGCAGTCAGTGAACAAGATGGAGAATTATTAACAGAGGAAGATGTTGATAATTTTTTGAGTAATGAACAAATGGAAGTAGCCAGTGGAAATAATGCATTAGAAGGGAGCAAGTATGTACCTCGAGTAGATATGAAATTCAAATCAATTACAGAAGCACATGATTTCTTCAACTTCTATTCTTTTTGTGCTGGTTTCTCAATAGTCAGAGCTCACAATTATCACACTACTAGTAAGAAGAGAAATGAAGAAGTAATCAGAGTTACTTTCAAGTGCAACAAATTTGGAAAAGATACATCTCAATCAAATTCTAAATCAAAAGAAGAGATTGTGGTGACAGAGAGAAATACAAATGTGAACAAAGTCACAGAATGCAAGTGTGCATTGGTTATAAGTGAAAGAAATATGATTTGGTGCATCACAAGATTGGATTTAGATCACAACCATGAATTAAGCCCCCCTGATGAAGTCAGATTTCTCAAGTCTCATAAACATATGACAAATGAAGAGAAGATACTCATTAGAACATTGAAGGAGTGTCATATACCTACCAGAAATATGATTGTTATTCTTTCTGTCCTAAGAGGAGGATTGACATCATTGCCATATACTAAAAAAGATGTGAGTAATGTCAGAAGTTCAATAAACATAGAGACAAGCTCAAATGATATGATGCAAACTTTGAGTTTTTTCAGAAAATTGAAAGAGAAAGATCCAGGATTCTTTTTTGAGTTTGATTTAGATGAGAATGGAAAGGTGAGGAATCTGTTTTGGACTAATGGTAGATCAAGAGAATGGTATGCCAAATATGGAGATTGTGTTAGTTTTGATACTACATTTCTCACGAATAGATACAATTTGCCGTTTGCACCATTTGTTGGCATTTCAGGCCATGGGAACACAATTTTGTTTGGATGTAGTTTTTTACATGATGAAACAACAGAAACATTCAAGTGGTTATTTGAAACCTTTTTGAGGGCAATGTCAAGAAAACATCCAAAAACAATCATAACAGATCAAGATGGAGCCATGAGATCTGCAATAGCAACTATTTTTCCAAATACTACTCACAAAAATTGTTTCTTTCATATTGTGAGGAAAGCAAGAAACTTATCTGGAACATTGTTTAAGAAGAAGGAAGGGTTATATGATGAGTACAGCGACATTATGAACAACTCATTGACTGAAGAGGAATTTGAGTTTTTATGGCAGTCTATGATGGATTATTTTGATTTGCATCATATCAAATTTCTCAAAAATATGTGGGAAATCAGAAAAAGGTTTATACTAGTTTATTTCAAAACAAACTTATGTCCTTTCATACACTGCACAGCTTTGAGTGAGGGAACCAATTCAAGATTCAAGAAAAATGTTGGACCACAATATAGCATTACAAGTTTTTTAGTGGAATATGTAAGAGTTATGGATACAATCACTAACTTGGAACAGCTAGATGATCATATTTCAAGGACAAAAAGACCAACTGCACTTTGGTCAGAGTATTACATTGAGTATCAAGTAGTACAGCTGTACAATAACAAAATTTTTAAGAAGTTCCAGATTGAACTTAAGAAAAGTACAAGGTTGCAGATGAGTGAACTAGTCAAGTTTGAAGCATATGAAGTGTTTGTAGCTTTAAATCAAAGAAAACAGGAATATAGAAAAAGGAAATACCTGATTTTGACAGATTTGGAGAAGGAAGATTTCAACTGTATCTGTTCAAAATTCCAAAAAGATGGTATACTTTGCTCCCATATCTTGAAGGTAATGCTTGACCTCAATATCAGCAAGATTCCAGAAAAATATATCATTGAGAGGTGGAGGAAAAAGGAAGAAAATAATCAATTGAGAGTTGACAATGTGGCCATACCTATATCAGAAAGCTCAACTTTGAGATTCAATATTCTGTCAAGAAAGAGTGCTGAAATTGCTTCAAAAGGTGCAGAAACAAAATAA

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CDS seq

ATGGAAGAAATTGAGGAGGACGATTTCATCAGAAGAGAGAATGAAGATTTACAGGAAATGATGGTAGAAGAAGCAATTCTTTGGATGAACCAATCACGGGAATCACAGGAATTGATGTTGGAAGAAGCATTTCTTTGGATGAACCAATCACAGGAATCACAGGAATTGATGTTGGAAGAAGCATTTCTTTGGATGAACAAATCACAGATTGAAGAAGTTGAATATTCTAAACATTCAGAAGATAATGATATAGATATTGAAGATGATTCAAATTGGTCGCTTGATATTTTCAATTTAGATGATGGTCATATGGCTCAAACAGGTTCAGCAAATAATCAAGGACACATTGGTGAAGCAGGTGTTGAACAAAATTTAGATGTACAAGCAGTCAGTGAACAAGATGGAGAATTATTAACAGAGGAAGATGTTGATAATTTTTTGAGTAATGAACAAATGGAAGTAGCCAGTGGAAATAATGCATTAGAAGGGAGCAAGTATGTACCTCGAGTAGATATGAAATTCAAATCAATTACAGAAGCACATGATTTCTTCAACTTCTATTCTTTTTGTGCTGGTTTCTCAATAGTCAGAGCTCACAATTATCACACTACTAGTAAGAAGAGAAATGAAGAAGTAATCAGAGTTACTTTCAAGTGCAACAAATTTGGAAAAGATACATCTCAATCAAATTCTAAATCAAAAGAAGAGATTGTGGTGACAGAGAGAAATACAAATGTGAACAAAGTCACAGAATGCAAGTGTGCATTGGTTATAAGTGAAAGAAATATGATTTGGTGCATCACAAGATTGGATTTAGATCACAACCATGAATTAAGCCCCCCTGATGAAGTCAGATTTCTCAAGTCTCATAAACATATGACAAATGAAGAGAAGATACTCATTAGAACATTGAAGGAGTGTCATATACCTACCAGAAATATGATTTCTATGATGGATTATTTTGATTTGCATCATATCAAATTTCTCAAAAATATGTGGGAAATCAGAAAAAGGTTTATACTAGTTTATTTCAAAACAAACTTATGTCCTTTCATACACTGCACAGCTTTGAGTGAGGGAACCAATTCAAGATTCAAGAAAAATGTTGGACCACAATATAGCATTACAAGTTTTTTAGTGGAATATGTAAGAGTTATGGATACAATCACTAACTTGGAACAGCTAGATGATCATATTTCAAGGACAAAAAGACCAACTGCACTTTGGTCAGAGTATTACATTGAGTATCAAGTAGTACAGCTGTACAATAACAAAATTTTTAAGAAGTTCCAGATTGAACTTAAGAAAAGTACAAGGTTGCAGATGAGTGAACTAGTCAAGTTTGAAGCATATGAAGTGTTTGTAGCTTTAAATCAAAGAAAACAGGAATATAGAAAAAGGAAATACCTGATTTTGACAGATTTGGAGAAGGAAGATTTCAACTGTATCTGTTCAAAATTCCAAAAAGATGGTATACTTTGCTCCCATATCTTGAAGGTAATGCTTGACCTCAATATCAGCAAGATTCCAGAAAAATATATCATTGAGAGGTGGAGGAAAAAGGAAGAAAATAATCAATTGAGAGTTGACAATGTGGCCATACCTATATCAGAAAGCTCAACTTTGAGATTCAATATTCTGTCAAGAAAGAGTGCTGAAATTGCTTCAAAAGGTGCAGAAACAAAATAA

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Protein seq

MEEIEEDDFIRRENEDLQEMMVEEAILWMNQSRESQELMLEEAFLWMNQSQESQELMLEEAFLWMNKSQIEEVEYSKHSEDNDIDIEDDSNWSLDIFNLDDGHMAQTGSANNQGHIGEAGVEQNLDVQAVSEQDGELLTEEDVDNFLSNEQMEVASGNNALEGSKYVPRVDMKFKSITEAHDFFNFYSFCAGFSIVRAHNYHTTSKKRNEEVIRVTFKCNKFGKDTSQSNSKSKEEIVVTERNTNVNKVTECKCALVISERNMIWCITRLDLDHNHELSPPDEVRFLKSHKHMTNEEKILIRTLKECHIPTRNMISMMDYFDLHHIKFLKNMWEIRKRFILVYFKTNLCPFIHCTALSEGTNSRFKKNVGPQYSITSFLVEYVRVMDTITNLEQLDDHISRTKRPTALWSEYYIEYQVVQLYNNKIFKKFQIELKKSTRLQMSELVKFEAYEVFVALNQRKQEYRKRKYLILTDLEKEDFNCICSKFQKDGILCSHILKVMLDLNISKIPEKYIIERWRKKEENNQLRVDNVAIPISESSTLRFNILSRKSAEIASKGAETK

Function Protein FAR1-RELATED SEQUENCE 3 [UniProtKB/Swiss-Prot:Q9ZVC9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_07G021820 OsN22_07G021820_01 Chr07 24250679 24256237 + NAM
CDS seq

ATGGAAGAAATTGAGGAGGACGATTTCATCAGAAGAGAGAATGAAGATTTACAGGAAATGATGGTAGAAGAAGCAATTCTTTGGATGAACCAATCACGGGAATCACAGGAATTGATGTTGGAAGAAGCATTTCTTTGGATGAACCAATCACAGGAATCACAGGAATTGATGTTGGAAGAAGCATTTCTTTGGATGAACAAATCACAGATTGAAGAAGTTGAATATTCTAAACATTCAGAAGATAATGATATAGATATTGAAGATGATTCAAATTGGTCGCTTGATATTTTCAATTTAGATGATGGTCATATGGCTCAAACAGGTTCAGCAAATAATCAAGGACACATTGGTGAAGCAGGTGTTGAACAAAATTTAGATGTACAAGCAGTCAGTGAACAAGATGGAGAATTATTAACAGAGGAAGATGTTGATAATTTTTTGAGTAATGAACAAATGGAAGTAGCCAGTGGAAATAATGCATTAGAAGGGAGCAAGTATGTACCTCGAGTAGATATGAAATTCAAATCAATTACAGAAGCACATGATTTCTTCAACTTCTATTCTTTTTGTGCTGGTTTCTCAATAGTCAGAGCTCACAATTATCACACTACTAGTAAGAAGAGAAATGAAGAAGTAATCAGAGTTACTTTCAAGTGCAACAAATTTGGAAAAGATACATCTCAATCAAATTCTAAATCAAAAGAAGAGATTGTGGTGACAGAGAGAAATACAAATGTGAACAAAGTCACAGAATGCAAGTGTGCATTGGTTATAAGTGAAAGAAATATGATTTGGTGCATCACAAGATTGGATTTAGATCACAACCATGAATTAAGCCCCCCTGATGAAGTCAGATTTCTCAAGTCTCATAAACATATGACAAATGAAGAGAAGATACTCATTAGAACATTGAAGGAGTGTCATATACCTACCAGAAATATGATTTCTATGATGGATTATTTTGATTTGCATCATATCAAATTTCTCAAAAATATGTGGGAAATCAGAAAAAGGTTTATACTAGTTTATTTCAAAACAAACTTATGTCCTTTCATACACTGCACAGCTTTGAGTGAGGGAACCAATTCAAGATTCAAGAAAAATGTTGGACCACAATATAGCATTACAAGTTTTTTAGTGGAATATGTAAGAGTTATGGATACAATCACTAACTTGGAACAGCTAGATGATCATATTTCAAGGACAAAAAGACCAACTGCACTTTGGTCAGAGTATTACATTGAGTATCAAGTAGTACAGCTGTACAATAACAAAATTTTTAAGAAGTTCCAGATTGAACTTAAGAAAAGTACAAGGTTGCAGATGAGTGAACTAGTCAAGTTTGAAGCATATGAAGTGTTTGTAGCTTTAAATCAAAGAAAACAGGAATATAGAAAAAGGAAATACCTGATTTTGACAGATTTGGAGAAGGAAGATTTCAACTGTATCTGTTCAAAATTCCAAAAAGATGGTATACTTTGCTCCCATATCTTGAAGGTAATGCTTGACCTCAATATCAGCAAGATTCCAGAAAAATATATCATTGAGAGGTGGAGGAAAAAGGAAGAAAATAATCAATTGAGAGTTGACAATGTGGCCATACCTATATCAGAAAGCTCAACTTTGAGATTCAATATTCTGTCAAGAAAGAGTGCTGAAATTGCTTCAAAAGGTGCAGAAACAAAATAA

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Protein seq

MEEIEEDDFIRRENEDLQEMMVEEAILWMNQSRESQELMLEEAFLWMNQSQESQELMLEEAFLWMNKSQIEEVEYSKHSEDNDIDIEDDSNWSLDIFNLDDGHMAQTGSANNQGHIGEAGVEQNLDVQAVSEQDGELLTEEDVDNFLSNEQMEVASGNNALEGSKYVPRVDMKFKSITEAHDFFNFYSFCAGFSIVRAHNYHTTSKKRNEEVIRVTFKCNKFGKDTSQSNSKSKEEIVVTERNTNVNKVTECKCALVISERNMIWCITRLDLDHNHELSPPDEVRFLKSHKHMTNEEKILIRTLKECHIPTRNMISMMDYFDLHHIKFLKNMWEIRKRFILVYFKTNLCPFIHCTALSEGTNSRFKKNVGPQYSITSFLVEYVRVMDTITNLEQLDDHISRTKRPTALWSEYYIEYQVVQLYNNKIFKKFQIELKKSTRLQMSELVKFEAYEVFVALNQRKQEYRKRKYLILTDLEKEDFNCICSKFQKDGILCSHILKVMLDLNISKIPEKYIIERWRKKEENNQLRVDNVAIPISESSTLRFNILSRKSAEIASKGAETK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0141500 SBH 0.093649 0.135214 0.915561
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g32110 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os07g0141500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0010680 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0008230 RBH 0.0 0.000000 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0010640 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0022030 RBH 0.0 0.250771 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0022180 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0402200 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0022640 RBH 0.0 0.0 0.496041
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0414500 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0021910 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0022080 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0022000 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0008270 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0021920 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0021860 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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