Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_07G013130 | OGI:07033710 | 13/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr07:15652249-15656610 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGAGGATCCAACGTCCCAGATGCGCCCGCACCCCCTTCTCTCTCTCGCGCTCGCAGCTCGCCGCAATCATCGCGCGTGTCGCTCCTCATCCCCTCCCGCACCCCCCCTCTCTCTCTCTTTCGATCGCCGCAATCGCCGCGCCTCCTCCGCAGAAATCGCCGCGCCTCCCCGTCACATCGCCGCGTCTCCCCTCCGCGCCGATCCGGTCTCCGCCCTCCGCCTCCTCCGCATCGCCGCGCCTCCCCGTCACGTCGCCGCGCCTCCCCTCCGCGCCGATCCGGTCTCCGCCCTCCGCCATCGGCATCAACGTCATCTACCGGTCGGAGCCGCGCGCAATCACCGCGCCTCCTCCGCATCGCCGCGAGTGCGCGTCAGGCGCCTGCCCGCCGCATCGCCGTGCCTCCTCCGCATCCCTCCCCTCCGCGCATCCTCCACCCGGATCCCTCGCCTCCGCCTGCGAGGAGGAACGCTTCGCCGGGCGCCTCTCCTCGGTATATGCAGTAGGAAATCCTTGCAATCGTCGCTACATAGGGCTTCTATTGTGAATTCAGATTTTAATTCCCTCCTGCTAAATTCCATTCTTGCATTCATGGCTGGCCGGGTTCTTCATCTATTGACGAAAATACAGCTATGTTTGTTCTAAGCAATTTCTGGTGTTATATTAGTCCAGTGGAAAATAATGTGCCTTTTATATCTTACATTTAGCTGATTAGATTCTGTGCATTTGCAAGTATTCGGTAAAAATGTTGCGGTGTCACAGGTCGGGTATTTTATTTCACATAGTGCACAACTAATAGTTCACGCGGGGGGATTTCTCTTTTTGACCACAGCTTTTTATTTGGGCATTGCATAAAATGAATAGGTGCTTAGCTTGGTTCTTAATAACTGCTCTGATCTGAGAGTTAGGTTGATTTAGTATAAACTGCACATATGATTTTGACTGCTCATTCAAATCAAAATATCCATGTCACTTGAAACATAAATCTACATGGATTACTGATGTTTGTTCATGTACTTCTAAGCCTTTTATTTTCTCTATCATCAGATTTTTTTGTTAGCTATAGTTCTATATTTATTTTTTGTTTGTTAGGAGGAGTTCAAGGAAATACAAAAATAGATGAACATGGAAACACTGTTTGTGTGGGCATTTCAGCCTTTTGCAGAGTATTTTAAAGACAAATGGTGTAGCTCGCCAGGGACTGCATTTGCGTCACTCGTCCGCGCCGCCATAACTCCATCGACAAGCCTCGCCGATCTGCGACGCCGACGAGCCGTGGGCTCCTGCATCAACGCACTGCCACCGCCTCCACCTCGAGCGTCAACGCCGCCAAGAGGTACAAAAACCCTGCTCCACCACCCCTCCAGCTTCTACCTGATCCCCATCCCTAATATGACCATAAATGTGATGTCCTATGAAGCATCAAGCATGTATGTCTTCTCTCTTTTATTTCACTTCTCATTGAGGATTAGCTCGGCGGTGCTGATTTTATTTTCCAATTGAGTATATAGCTGGTCCATTTACTAAACAAGGCATAAAAGCATCCATATACCTTCAACCCATAATATGTATTTTTAGTGGTTCTAACCACATATTGCATAATACAATGTGCTGCAGTGATACTGAGCCTTGTAAGATACCTACTTAGAGATGAGATTTTAGGGGGTTTCGGTGAACTGACTTGTAGTTCTCGGTGTGGGAAATCATTTGTGTGTCGGTGAAGTCATGCTCATAATGACATAGAGCTCACCTGCTAATTTTGGTAAAATAAACTGCATGGTGTTGATATTTTTGAAGTTCAGGCTAATAAATTTCATGATGATATGCTCCACTTAAAAACAGTTTTAAGGCAAATGCTCTAATTATATTAGAAAACGGTTTTAACTTTTTTTTTGCATGCATGCATGCTCTACATCTGTTTGTTGACCCATTGTCAACTCCTGGCAGAAGTAAAAACTCCTGGCATACAATTTCTACTATCCTTTTTACTGCTTTCTTGATTTTTTGGTGTGTGTCGGTTCCTGGATCGGTGATTTAATGGTTTCAGTTTATATTCAGTATATATTCAATTATTTTGTAACATGAGCAGGTAAAATCCCCTCGACAAGCTGCTTCAGCGACCGGTATCCTCGGTCTCCGCCTCAACCGCCGCCGCCGCCACCACCGGATCCCTGCATCGTCGATTCTACTGCACACCTGCGAGCATAGCAGTGGATGTGAGGGTGTCGTGGTCCTGCTACAACCCTGTGAGCATCCACATCTCAGTTCTCATTCATCTCTCTCTGTCTCTATCCCACTTTTCTCTCATATTTGCTTGCATAAACCCTTAGCTTCTCTTCTAGATCTGGATGGATCTATTATCTTATTTTGTTTGTTTGCTAGGGTTAAATATGATTCAATTCAACACGAAACAGATGCCATATTTCACTGAACAACAAGCCCATTCACTCAATATCACATCAGGTCCTTGTAGCTTAAAATGAACACAATAGTACATTATTCCTTGCTGCTCATTATTTCTTTGGCATGCCGTCTCAATGTTCGAACTGATATGATGAGCATGTTAATTTGGCCTTGATATGTCAGTTACCGGTTTCATGGCCATTGTTCCACACGTCAAATACTCAAAAGTAGATGAAACTTAACTGCAGGAGTTCAGGCATTTTATCTTTTGCTAGGGTTAAATGTGATTCAATTCAACACGAAACAGAGGCCATGTTTCACTGAACAAGCCCATTCACTCAATATCACATCACTGTCACATTTTACAATTTCTGACTTCAGATACTGTGAATCATGCTTCAAATATATGTAATAATATAACCAGTATGTCAAGCTTATTATTATCTTCATAGATGGTTTGTAGTATGTCAAACTTGTGATAATTTTAAGAACTATAATTGATAGTATCTTCGGACATCTAATTTAGCCATTCACATGATTGATATGCTCTTGCCTTGCTAACGTAGGTCTTTCTTGTACTGATGGGTTCCTATTGGTTATTGACTATTAAAATAAATTCTAACATTATAAACTGATTTGTATAATATACGTCACTGGATCTGGTTATTCCTATATGCAAATGCACAACTTCAAATAGAAGCAGCTGTGTTTACGTTAATGGTAATGACTGATGGTTATATATGGACTTATCTGAAGTTATTTATGGACTTATCTGAACTTTGCATGCTTCCTCAGATGTCTGACTTCTTTGTAATGCTCTTTTATTTTTCTGTATTAATGCTTGGGATTACGACTCAGATAGAGTGCTAAATGTTTTCCACATGTGCAGAACAAGTGAAACTAGCCGTTGGAGTGCTTCTTTAAGTAGACAAGGCATAATGGAGAATATGGGTGAGACATTAATTTGTTTTTTCTCTAATTTGCTCACTGACTGAGATGGAATACTGGATAACATAATCATCCCGTGTGAATATCTCCAAAGAACTGGACAAGGGCTCATTCAGATGTATATGTCATTGGTTGTTCAACACATTAGTTATGCATTGATGACTGATTGGTGATGATTGTACCTTATGCACTTCACGCTGACAAGTAACTTGAGATGTTTATATTTGCATGGGAGAACTTGTGTATGTCATATCTTTGTTTGACCCTGCACACGATTTCATAATCGCTTTATTGTACTGGGCATTTTCGCCATAATACATGCTTAAAACATTGCAATGTATGGTTATGGCACTATTATGCAAGCCATGATTAACCACTAATGTAAAAATACGTCTATTAGGTGTTGACGCAACGAAGCCACAAACTGAAGAGCGTATTGCATTCCGGGATATCACCAACAGATTGGATGTATTGCAAACGACACCTATAACTCCTTCCGATGAGGTATTACGTAAGCGGGAAGCACATAACCGAAGCCAACATGAATACCGTGCAAGGAAAAAGGCTGCAGCAAATACCCCGTGTTCTGGAACACTGCGGCAACCAACTACTGCTTCTCTTTCTAAGGAATTTGAAGTTGTCAATGCCCAGCTAGCTGAAGCTACCAATGATGCCAGAGAGGAAAGGAACCGTAAGCAACGTGAATATCGCCAAAAGAAGGTTGGGTCAACTAATCTTGATAGTAGTGTGACCTCTTTAACACCAGTACAACCAGCAAATGAGGAAAGGAACAGAAAGCAGCGTGAATACCGTGCGAGGAAGAAGGCCGAGTCAAGCATTGTTAGCGGATCAAATTCTGAATTAACCAATCATAATGGTATAACTTACTGTCAGAATCAACTTTTTGTTTTAATCACTATTTTTTCATTTAGTGTTGCCATATGGAACGACATCTTCTACCATTTTGCAAGCTACAAGCGTATTATACAAGGAAGATGTTGATCCAGATGAT
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| CDS seq | ATGAGGATCCAACGTCCCAGATGCGCCCGCACCCCCTTCTCTCTCTCGCGCTCGCAGCTCGCCGCAATCATCGCGCGTGTCGCTCCTCATCCCCTCCCGCACCCCCCCTCTCTCTCTCTTTCGATCGCCGCAATCGCCGCGCCTCCTCCGCAGAAATCGCCGCGCCTCCCCGTCACATCGCCGCGTCTCCCCTCCGCGCCGATCCGGTCTCCGCCCTCCGCCTCCTCCGCATCGCCGCGCCTCCCCGTCACGTCGCCGCGCCTCCCCTCCGCGCCGATCCGGTCTCCGCCCTCCGCCATCGGCATCAACGTCATCTACCGGTCGGAGCCGCGCGCAATCACCGCGCCTCCTCCGCATCGCCGCGAGTGCGCGTCAGGCGCCTGCCCGCCGCATCGCCGTGCCTCCTCCGCATCCCTCCCCTCCGCGCATCCTCCACCCGGATCCCTCGCCTCCGCCTGCGAGGAGGAACGCTTCGCCGGGCGCCTCTCCTCGGTATATGCACCTTTTGCAGAGTATTTTAAAGACAAATGGTGTAGCTCGCCAGGGACTGCATTTGCGTCACTCGTCCGCGCCGCCATAACTCCATCGACAAGCCTCGCCGATCTGCGACGCCGACGAGCCGTGGGCTCCTGCATCAACGCACTGCCACCGCCTCCACCTCGAGCGTCAACGCCGCCAAGAGGTACAAAAACCCTGCTCCACCACCCCTCCAGCTTCTACCTGATCCCCATCCCTAATATGACCATAAATGTGATGTCCTATGAAGCATCAAGCATAACAAGTGAAACTAGCCGTTGGAGTGCTTCTTTAAGTAGACAAGGCATAATGGAGAATATGGGTGTTGACGCAACGAAGCCACAAACTGAAGAGCGTATTGCATTCCGGGATATCACCAACAGATTGGATGTATTGCAAACGACACCTATAACTCCTTCCGATGAGGTATTACGTAAGCGGGAAGCACATAACCGAAGCCAACATGAATACCGTGCAAGGAAAAAGGCTGCAGCAAATACCCCGTGTTCTGGAACACTGCGGCAACCAACTACTGCTTCTCTTTCTAAGGAATTTGAAGTTGTCAATGCCCAGCTAGCTGAAGCTACCAATGATGCCAGAGAGGAAAGGAACCGTAAGCAACGTGAATATCGCCAAAAGAAGGTTGGGTCAACTAATCTTGATAGTAGTGTGACCTCTTTAACACCAGTACAACCAGCAAATGAGGAAAGGAACAGAAAGCAGCGTGAATACCGTGCGAGGAAGAAGGCCGAGTCAAGCATTGTTAGCGGATCAAATTCTGAATTAACCAATCATAATGGTATAACTTACTGTCAGAATCAACTTTTTGTTTTAATCACTATTTTTTCATTTAGTGTTGCCATATGGAACGACATCTTCTACCATTTTGCAAGCTACAAGCGTATTATACAAGGAAGATGTTGA
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| Protein seq | MRIQRPRCARTPFSLSRSQLAAIIARVAPHPLPHPPSLSLSIAAIAAPPPQKSPRLPVTSPRLPSAPIRSPPSASSASPRLPVTSPRLPSAPIRSPPSAIGINVIYRSEPRAITAPPPHRRECASGACPPHRRASSASLPSAHPPPGSLASACEEERFAGRLSSVYAPFAEYFKDKWCSSPGTAFASLVRAAITPSTSLADLRRRRAVGSCINALPPPPPRASTPPRGTKTLLHHPSSFYLIPIPNMTINVMSYEASSITSETSRWSASLSRQGIMENMGVDATKPQTEERIAFRDITNRLDVLQTTPITPSDEVLRKREAHNRSQHEYRARKKAAANTPCSGTLRQPTTASLSKEFEVVNAQLAEATNDAREERNRKQREYRQKKVGSTNLDSSVTSLTPVQPANEERNRKQREYRARKKAESSIVSGSNSELTNHNGITYCQNQLFVLITIFSFSVAIWNDIFYHFASYKRIIQGRC |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G013130 | OsN22_07G013130_01 | Chr07 | 15652249 | 15656610 | + | NAM | ||
| CDS seq | ATGAGGATCCAACGTCCCAGATGCGCCCGCACCCCCTTCTCTCTCTCGCGCTCGCAGCTCGCCGCAATCATCGCGCGTGTCGCTCCTCATCCCCTCCCGCACCCCCCCTCTCTCTCTCTTTCGATCGCCGCAATCGCCGCGCCTCCTCCGCAGAAATCGCCGCGCCTCCCCGTCACATCGCCGCGTCTCCCCTCCGCGCCGATCCGGTCTCCGCCCTCCGCCTCCTCCGCATCGCCGCGCCTCCCCGTCACGTCGCCGCGCCTCCCCTCCGCGCCGATCCGGTCTCCGCCCTCCGCCATCGGCATCAACGTCATCTACCGGTCGGAGCCGCGCGCAATCACCGCGCCTCCTCCGCATCGCCGCGAGTGCGCGTCAGGCGCCTGCCCGCCGCATCGCCGTGCCTCCTCCGCATCCCTCCCCTCCGCGCATCCTCCACCCGGATCCCTCGCCTCCGCCTGCGAGGAGGAACGCTTCGCCGGGCGCCTCTCCTCGGTATATGCACCTTTTGCAGAGTATTTTAAAGACAAATGGTGTAGCTCGCCAGGGACTGCATTTGCGTCACTCGTCCGCGCCGCCATAACTCCATCGACAAGCCTCGCCGATCTGCGACGCCGACGAGCCGTGGGCTCCTGCATCAACGCACTGCCACCGCCTCCACCTCGAGCGTCAACGCCGCCAAGAGGTACAAAAACCCTGCTCCACCACCCCTCCAGCTTCTACCTGATCCCCATCCCTAATATGACCATAAATGTGATGTCCTATGAAGCATCAAGCATAACAAGTGAAACTAGCCGTTGGAGTGCTTCTTTAAGTAGACAAGGCATAATGGAGAATATGGGTGTTGACGCAACGAAGCCACAAACTGAAGAGCGTATTGCATTCCGGGATATCACCAACAGATTGGATGTATTGCAAACGACACCTATAACTCCTTCCGATGAGGTATTACGTAAGCGGGAAGCACATAACCGAAGCCAACATGAATACCGTGCAAGGAAAAAGGCTGCAGCAAATACCCCGTGTTCTGGAACACTGCGGCAACCAACTACTGCTTCTCTTTCTAAGGAATTTGAAGTTGTCAATGCCCAGCTAGCTGAAGCTACCAATGATGCCAGAGAGGAAAGGAACCGTAAGCAACGTGAATATCGCCAAAAGAAGGTTGGGTCAACTAATCTTGATAGTAGTGTGACCTCTTTAACACCAGTACAACCAGCAAATGAGGAAAGGAACAGAAAGCAGCGTGAATACCGTGCGAGGAAGAAGGCCGAGTCAAGCATTGTTAGCGGATCAAATTCTGAATTAACCAATCATAATGGTATAACTTACTGTCAGAATCAACTTTTTGTTTTAATCACTATTTTTTCATTTAGTGTTGCCATATGGAACGACATCTTCTACCATTTTGCAAGCTACAAGCGTATTATACAAGGAAGATGTTGA
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| Protein seq | MRIQRPRCARTPFSLSRSQLAAIIARVAPHPLPHPPSLSLSIAAIAAPPPQKSPRLPVTSPRLPSAPIRSPPSASSASPRLPVTSPRLPSAPIRSPPSAIGINVIYRSEPRAITAPPPHRRECASGACPPHRRASSASLPSAHPPPGSLASACEEERFAGRLSSVYAPFAEYFKDKWCSSPGTAFASLVRAAITPSTSLADLRRRRAVGSCINALPPPPPRASTPPRGTKTLLHHPSSFYLIPIPNMTINVMSYEASSITSETSRWSASLSRQGIMENMGVDATKPQTEERIAFRDITNRLDVLQTTPITPSDEVLRKREAHNRSQHEYRARKKAAANTPCSGTLRQPTTASLSKEFEVVNAQLAEATNDAREERNRKQREYRQKKVGSTNLDSSVTSLTPVQPANEERNRKQREYRARKKAESSIVSGSNSELTNHNGITYCQNQLFVLITIFSFSVAIWNDIFYHFASYKRIIQGRC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G013130 | OsN22_07G013130_02 | Chr07 | 15652364 | 15655845 | + | IsoSeq | ||
| CDS seq | ATGGAGAATATGGGTGAGACATTAATTTGTTTTTTCTCTAATTTGCTCACT |
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| Protein seq | MENMGETLICFFSNLLT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr07 | 15652740 | 15653403 | + | OsN22_07G013130_01 | OsN22_07G013130_02,OsN22_07G013130_01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.321511 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0275400 | RBH | 2.161777 | 2.361506 | 3.541226 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0275400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0013090 | RBH | 0.817565 | 0.000000 | 5.003784 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0013580 | RBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0013050 | RBH | 0.160123 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0013130 | RBH | 0.578091 | 5.543185 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0013150 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0013340 | RBH | 0.052506 | 0.229284 | 0.085654 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0013170 | RBH | 0.041249 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0012980 | RBH | 0.0 | 0.000000 | 1.076417 |
