Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_07G003130 OGI:07006270 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr07:2766871-2772079
Gene Symbol -
DNA seq

TCACTTCGGTATGTCTTCTGCCTCTTCCTTGGATCTTGGGAAGCTTGTATTATTCCTGCAGATTACAAAAAAAATATTTATGAGAAATTGTTTTTCTTTTACATATCAGTTAATACCTATTAAAATTGACTGAAAATTCTTGTTTTTGTTTCATACTTTTAGTTGATTCAGGCTCTTTGTTGATGTCAGCTTTCTTCTTTTCTTGTTGCTTTGCTTGATTTTGACCAGTGGCTGCAATTACAAAGAAAGAACACATTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATGTATGTATGCATGTATGTATGTATGTATGTATGTATGTATCTATTCTAGCTATTTGTAGCACATGAACATTCTTGCACAACTCATAATTTTTCTTACCTCCTGCTGTTTTCTGTTGGAGTAGTTTTCTGCTTTTGCTTTGCATTAGTGGGCAGTTTTCTATTGTGTGATTTGTTTTGCCACACCGAGTGCAGTGGTTTTTGGTCTTCTCTATAATCTTCTCCACTATTCTCCTCTGTCTTACTGATTTTCTACCCTTTGTGTTAGCTATATCAGGATCTGCTATTTCTTCTTGTTCCACTGTTATTTCTTCTTCTGTTTCATCTGCAGGAACATTGTTCACTGTGTTACTTTGATGATGCGACGAGCTTTCAGGTACATCTTCAAGCATAGCATTTATCTTTCTGTCCAAGTTCTCAATCTCATTTAACATGCACTCATATGTTTCTTTCCTCTTTGATGCCTTTGATGCTATGTTGACTGACTTTCTTGACAGCACATTGAACCTCAACATTGAGCTGTTTCCATTGTATATTGGTCTGTCAGAAGTGCTTGTATGTTTCCTTTCTTTCTTCCTCCATCTTTCTATGATATACTTCTCAGGAATCTTTTTAATTTCTAGTGCCAACATAACTTTCAGGATATGGCAGCAGAGGATACCATCTTTGGAGAACTTCCCACATATGCAACTGTAGTTTTCTTGTGGTAAGTCAGTAATGACAACATATTTCCTTGGTCTCCACTCTTTCTTTGTTTGATTCAGAGCTATGAACACCTCATATATCTTTCCTTTTTTTATAGTATTCATTTCCATCCTTGTAGATTCTATTAGTTCTTCTTGGAATTTCTCAAATATGCTCAAGTTGTACAATTGTAATGCTTGTTCTTCAATGTAGTTTCTACACCATAGTATATCTGGTCTTTTAGTTCTTGATTCATGATCTTTGCTGTACTCAGTGCTGAATATAGTGTCATTTATGCTTTCATACTCATTCATGAAGCTCATCACACTATGCTTTGGTCCTACACTTCTTTTAAACCTTGCATTTGTGCCCTCACTTAATGCTGTGCTTTGAATGAAGGGGCAGAAGTCAGTCTTGAAATATACAGGCACAAATTGTTCTCTAGTTTTCCACATGTGTTCAAAATATTTGACATTGTGCAAGCTATATTTTTCAATCATTTGAGGCCATAAGCTTTCAAATTCCTCTCTTGTTAAACAATTGTTCACAATGTCCTCAAAATCTTTGTGCAGATCCTTCTTTGTTTTATCTGAAAATGTGCTTCCTGTCTTTTCTCTGCAATTTTTCTTAACATGGAATAGGCAATTTATGTGCTTTGTTTGTTTAAAAACTTGACGTATCGCAGACCTCATAGCATTGTCTTGATCAGTTATGATAGTTTGGGGATGCTTTTCACTCATTGCTGTCAGAAATGTTTCAAAAACCCACTTGAAAGTCTCTGTTGTTTCATCACCTAGAAAAGCACACCCAAACAAGCAAGTATTTCCATGGCCTGTGATGCCGACAAATGGAGCAAATGGCAGATTGTATTTGTTTGTTTGGTATGTTGTGTCAAAGCTGATAATATCCCCATATTCTGCATACAGCTCAATAGATCTGCCATCAGCCCAGAACATGTTTTTCACTTTGTTTTCCTCATCTAGCTGAAACTTATAATAGAAATCAGGGTCCTCTTGTTCTTTGTTCCTTAGGTAACTTAGTACCTGTTTCATATCAGCATTCCTTGTCTCTGAATTGATTGCTGTACAAACATTGCTAACATCTTTTTTGGTGTAAGGTAATGCTGCTAACCCTCCACGGAGAAAAGACAATATTGCAATCATATTCCTTATTGGTATGTTGCACTCTTTCAAAGTCTTTATCATCTTTTTCTCCTCTTCTGTCATGTTCTTATGTGAGCGAAGAAACTTCTTTTCTGTATTGGGACTAAGTTCATGGTTATGATTGAGCTCAAGCCTTATTATTTTCCACACTTTCCTCTCCTCTCGAACCACCATCACACACTTGCAGTCAGTCCTGATAATCACTTTTGTCTTCCTTCGCTGTTTTTTGTTGCTCTTTTTCTTCTTTTTGCCATCTGAATTTTTGCCATACCTGTAGCAGTTGTATGTGTATTTGGTTACCTCACCTTGTCTTTTCTTGCTTGTTGATTTCTAGTTGTGTGTTTTAACAACTGAGAATCCAGCTTGATAAGCGTAAAAGTTGAAGAAATCATACGCTTGATCAGAAGAATCAAATTGCATATTGATGTGAGGTATGCATCTGCTGTCAACTTCCTTGTGGCCTTCCTCCTCATTTTTCAGGAAATTGTCAATGTCCTCTTCATCTAAATATTCAGCATTTGTAGCTTCTGAAGCATCATTCATTTGAGTGTTGTTCTCATTTGTTTCTTGTCGACCTTCTTGAGCTGTTGTACTATCCATTGATTTGTCCAATACAGCATCATTTGTAAGAATGCCATCATTACTGATCTGAAAAATAAAAATCAGTGCTTATTAAGTCATTTAGCAAACTGTTTTTCAATGATAATTTTTTTTGCACTGTAATCATACCTGAGTATGTGAATTGTTTGAATACAAGTTTAGCCACTGTTCTTGTTCATCAATAGAAGATTCTCCAAGATTGTCGCCAGCAGTATATCTTGGATTTACCTGCATTATATATTTTTTTGCCATTTGTATTAATAAAATTGTTCTTTTTTCAAATAATACTTGTACACACATTTAATTCAAATTAAAACTTGTACAATCTTAAAATACCTCCAATCTGAATAGCTTGTTGTTTGATTTATATAACTCCTCCATAGTTTTCTCCTTTTCATTCTGCACAGATACATAATGTTAGCTTAGTTTAAAATAATACTGAACCGAATAATGAAGCGATGCTTCCTGAAAGTATAACCTCCGTCAATGGCTCTACAAATGTGTTGTTGTATATTTCATCAAATTCTTTGTAGTAACTCTCTGTTGTTGATACCTGCTAACATAGAATTGCAATTTTTCAGTACCTTACACCTCAATCCCAAAATGCAGATATAGAATATGTTAAATCTGTATCAAGAATTAAGAATTTTTGTATTACCTTTTGATGATATGTTTCTGTTGATTGCATTTGTTCATTTGTTGGTTCTGGAGTAAATCTACTTGTTGTCAAAATCATGGAGTTCTACAAGACATAATGATATAAAATATGTTAGTTTAATATATAGAAAATGATGGGATTCTACAAGTCGTAATGATATTTCCTTTTTTTTATATACAATTGCATTCATTACCTCAAATCCTAGCGGTGTTTGAAGTAGTTTCCTGTATATCTTAGCCCCTGAAAAAACATATGAAATCAATTAGTACAGAAAATCCTTGTCTCCTACATATTAAAATGGAAACAAAATTTTCTTTCTTCAAACACATACACATATTGACTTAGAATACAAACACATTACAGTAGGCTTTGTTGATCTGAACATAGTTTCGTAGCATTGTAATTTTCTAATCCCAGTGTATGAATATGAATTTTTGTATGAATTATACTAAAATTACAGTGCTATATGACTAAAATTACATATGTAAATTTAGTTACATATCACTGTAATTTTAATTTCTCAAAATTACAGTGCTATGAGACTAAATTTACATATGTAAATTTAGTCATATAGCACTGTAATTTTCTACTTCTAGGGTATAAATGTGAATTTGGTAGGCATTTTTTATATTCTGCATGCTGTAGTTTGGAATCTGAAATCAATTTATTTTTTGGTGGCAGGGAAGTGTGTGAGTTTGCAAAATAACAGACTTAAAAGTGCATAATTTAGTGTTGTATAAATTTTGCACTTATAGCTTACTACTGTAATGGCTTAGTATTCTAGTGTTTTATGTGTGGGATTTGCATTGTATAGTAGTTCAGTTTTGGGCTACAAGACTTTGTTTTACTATATATGACATCTCTAGGATTTTGGCAGACAGCTCTAGAGTTGTACTAAAATTACAGTGCAATATGACTAAATTTACATATGTAAATTTAGTCATATAGGACTGTAATTTCTCAAAATTACAGTGCTATGTAACTAAATTTACATATGTAAATTTAGTCATATAGGACTGTAATTTTCTATTTCTAGTGTATGAATGTGAATTTGGTAGGTGCTTTTTAAATCTGCAAGCTGCAGTTTGGAAGCTGAAATAAATTTTATTTTTTTTGGGTGGCAGGGAAGTGTGTGAGTAAGCATAATAACAGGCTTAGTCAGCCTACTGTAATGGCTTAGTATACTAGTGTTTTATGTGTGGGATTTGCATTGTAGAGTAGTTCAGTTTTGGGCTACAAGACTTTGTTTTACTATATTGTCAAAAGTAGTCAAATTGTTTCAGAGTCAAACTATATTGTTTTTTACAGGTGATTTGGTGCCCATAATTTCTAAGGCTGCTTGTAAATTGTTCTTTGTTTTTAAAATTTTAGGTGTATTTTCTAGGTGAATACATGTGTTTGTGCTGAAATTGAATTCTAGGTGAAATTGTGCTTGTGCTGATCAGGAATTGTTTTTTCTGAAGGAAATCACCAGATGGAGAACTGGAGTCTGAATGAATGTTTGATGCTGTTTGATGCAATTTTTTAAAGCCATCTGATGCCAGATCTAGTTTTTGAAGTGAGGGCAAAAGATTGCTCAAGCATGTACGACTACAGATGGATCAAGCAAAACTGAGATTATGATGAATCCAGGTAATCCCCTTTTTGTACTGACCTGTTGTTGTGTTGCTGATTTGCTGGTTTTGATTCACCAGCTGCTCGTCACCTTGAGTTTGATCGATTTGTTTCATTTTGTCTCTCTTTTTCCTGGTGCTCTCGGTGCTCTCCAT

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CDS seq

ATGGAGAGCACCGAGAGCACCAGGAAAAAGAGAGACAAAATGAAACAAATCGATCAAACTCAAGGTGACGAGCAGCTGGTGAATCAAAACCAGCAAATCAGCAACACAACAACAGGGGCTAAGATATACAGGAAACTACTTCAAACACCGCTAGGATTTGAGGTATCAACAACAGAGAGTTACTACAAAGAATTTGATGAAATATACAACAACACATTTGTAGAGCCATTGACGGAGAATGAAAAGGAGAAAACTATGGAGGAGTTATATAAATCAAACAACAAGCTATTCAGATTGGAGGTAAATCCAAGATATACTGCTGGCGACAATCTTGGAGAATCTTCTATTGATGAACAAGAACAGTGGCTAAACTTGTATGGCAAAAATTCAGATGGCAAAAAGAAGAAAAAGAGCAACAAAAAACAGCGAAGGAAGACAAAAGTGATTATCAGGACTGACTGCAAGTGTGTGATGGTGGTTCGAGAGGAGAGGAAAGTGTGGAAAATAATAAGGCTTGAGCTCAATCATAACCATGAACTTAGTCCCAATACAGAAAAGAAGTTTCTTCGCTCACATAAGAACATGACAGAAGAGGAGAAAAAGATGATAAAGACTTTGAAAGAGTGCAACATACCAATAAGGAATATGATTGCAATATTGTCTTTTCTCCGTGGAGGAAACTACATTGAAGAACAAGCATTACAATTGTACAACTTGAGCATATTTGAGAAATTCCAAGAAGAACTAATAGAATCTACAAGGATGGAAATGAATACTATAAAAAAAGGAAAGATATATGAGGTGTTCATAGCTCTGAATCAAACAAAGAAAGAGTGGAGACCAAGGAAATATGTTGTCATTACTGACTTACCACAAGAAAACTACAGTTGCATATGTGGGAAGTTCTCCAAAGATGGTATCCTCTGCTGCCATATCCTGAAAGTTATGTTGGCACTAGAAATTAAAAAGATTCCTGAGAAGTATATCATAGAAAGATGGAGGAAGAAAGAAAGGAAACATACAAGCACTTCTGACAGACCAATATACAATGGAAACAGCTCAATGTTGAGGTTCAATGTGCTGTCAAGAAAGTCAGTCAACATAGCATCAAAGGCATCAAAGAGGAAAGAAACATATGAGTGCATGTTAAATGAGATTGAGAACTTGGACAGAAAGATAAATGCTATGCTTGAAGATGTACCTGAAAGCTCGTCGCATCATCAAAGTAACACAGTGAACAATGTTCCTGCAGATGAAACAGAAGAAGAAATAACAGTGGAACAAGAAGAAATAGCAGATCCTGATATAGCTAACACAAAGGGTAGAAAATCAGTAAGACAGAGGAGAATAGTGGAGAAGATTATAGAGAAGACCAAAAACCACTGCACTCGGAATAATACAAGCTTCCCAAGATCCAAGGAAGAGGCAGAAGACATACCGAAGTGA

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Protein seq

MESTESTRKKRDKMKQIDQTQGDEQLVNQNQQISNTTTGAKIYRKLLQTPLGFEVSTTESYYKEFDEIYNNTFVEPLTENEKEKTMEELYKSNNKLFRLEVNPRYTAGDNLGESSIDEQEQWLNLYGKNSDGKKKKKSNKKQRRKTKVIIRTDCKCVMVVREERKVWKIIRLELNHNHELSPNTEKKFLRSHKNMTEEEKKMIKTLKECNIPIRNMIAILSFLRGGNYIEEQALQLYNLSIFEKFQEELIESTRMEMNTIKKGKIYEVFIALNQTKKEWRPRKYVVITDLPQENYSCICGKFSKDGILCCHILKVMLALEIKKIPEKYIIERWRKKERKHTSTSDRPIYNGNSSMLRFNVLSRKSVNIASKASKRKETYECMLNEIENLDRKINAMLEDVPESSSHHQSNTVNNVPADETEEEITVEQEEIADPDIANTKGRKSVRQRRIVEKIIEKTKNHCTRNNTSFPRSKEEAEDIPK

Function Protein FAR1-RELATED SEQUENCE 3 [UniProtKB/Swiss-Prot:Q9ZVC9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_07G003130 OsN22_07G003130_01 Chr07 2766871 2772079 - NAM
CDS seq

ATGGAGAGCACCGAGAGCACCAGGAAAAAGAGAGACAAAATGAAACAAATCGATCAAACTCAAGGTGACGAGCAGCTGGTGAATCAAAACCAGCAAATCAGCAACACAACAACAGGGGCTAAGATATACAGGAAACTACTTCAAACACCGCTAGGATTTGAGGTATCAACAACAGAGAGTTACTACAAAGAATTTGATGAAATATACAACAACACATTTGTAGAGCCATTGACGGAGAATGAAAAGGAGAAAACTATGGAGGAGTTATATAAATCAAACAACAAGCTATTCAGATTGGAGGTAAATCCAAGATATACTGCTGGCGACAATCTTGGAGAATCTTCTATTGATGAACAAGAACAGTGGCTAAACTTGTATGGCAAAAATTCAGATGGCAAAAAGAAGAAAAAGAGCAACAAAAAACAGCGAAGGAAGACAAAAGTGATTATCAGGACTGACTGCAAGTGTGTGATGGTGGTTCGAGAGGAGAGGAAAGTGTGGAAAATAATAAGGCTTGAGCTCAATCATAACCATGAACTTAGTCCCAATACAGAAAAGAAGTTTCTTCGCTCACATAAGAACATGACAGAAGAGGAGAAAAAGATGATAAAGACTTTGAAAGAGTGCAACATACCAATAAGGAATATGATTGCAATATTGTCTTTTCTCCGTGGAGGAAACTACATTGAAGAACAAGCATTACAATTGTACAACTTGAGCATATTTGAGAAATTCCAAGAAGAACTAATAGAATCTACAAGGATGGAAATGAATACTATAAAAAAAGGAAAGATATATGAGGTGTTCATAGCTCTGAATCAAACAAAGAAAGAGTGGAGACCAAGGAAATATGTTGTCATTACTGACTTACCACAAGAAAACTACAGTTGCATATGTGGGAAGTTCTCCAAAGATGGTATCCTCTGCTGCCATATCCTGAAAGTTATGTTGGCACTAGAAATTAAAAAGATTCCTGAGAAGTATATCATAGAAAGATGGAGGAAGAAAGAAAGGAAACATACAAGCACTTCTGACAGACCAATATACAATGGAAACAGCTCAATGTTGAGGTTCAATGTGCTGTCAAGAAAGTCAGTCAACATAGCATCAAAGGCATCAAAGAGGAAAGAAACATATGAGTGCATGTTAAATGAGATTGAGAACTTGGACAGAAAGATAAATGCTATGCTTGAAGATGTACCTGAAAGCTCGTCGCATCATCAAAGTAACACAGTGAACAATGTTCCTGCAGATGAAACAGAAGAAGAAATAACAGTGGAACAAGAAGAAATAGCAGATCCTGATATAGCTAACACAAAGGGTAGAAAATCAGTAAGACAGAGGAGAATAGTGGAGAAGATTATAGAGAAGACCAAAAACCACTGCACTCGGAATAATACAAGCTTCCCAAGATCCAAGGAAGAGGCAGAAGACATACCGAAGTGA

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Protein seq

MESTESTRKKRDKMKQIDQTQGDEQLVNQNQQISNTTTGAKIYRKLLQTPLGFEVSTTESYYKEFDEIYNNTFVEPLTENEKEKTMEELYKSNNKLFRLEVNPRYTAGDNLGESSIDEQEQWLNLYGKNSDGKKKKKSNKKQRRKTKVIIRTDCKCVMVVREERKVWKIIRLELNHNHELSPNTEKKFLRSHKNMTEEEKKMIKTLKECNIPIRNMIAILSFLRGGNYIEEQALQLYNLSIFEKFQEELIESTRMEMNTIKKGKIYEVFIALNQTKKEWRPRKYVVITDLPQENYSCICGKFSKDGILCCHILKVMLALEIKKIPEKYIIERWRKKERKHTSTSDRPIYNGNSSMLRFNVLSRKSVNIASKASKRKETYECMLNEIENLDRKINAMLEDVPESSSHHQSNTVNNVPADETEEEITVEQEEIADPDIANTKGRKSVRQRRIVEKIIEKTKNHCTRNNTSFPRSKEEAEDIPK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0141500 SBH 0.093649 0.135214 0.915561
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g01270 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os07g0141500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0010680 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0000240 SBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0010640 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0022040 SBH 0.000000 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0022190 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0036900 RBH 2.443092 3.0872255 4.310263
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0010870 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0126700 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0021910 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0022080 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0003050 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0011640 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0013290 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G011060 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0002930 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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