Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsN22_07G003130 | OGI:07006270 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr07:2766871-2772079 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | TCACTTCGGTATGTCTTCTGCCTCTTCCTTGGATCTTGGGAAGCTTGTATTATTCCTGCAGATTACAAAAAAAATATTTATGAGAAATTGTTTTTCTTTTACATATCAGTTAATACCTATTAAAATTGACTGAAAATTCTTGTTTTTGTTTCATACTTTTAGTTGATTCAGGCTCTTTGTTGATGTCAGCTTTCTTCTTTTCTTGTTGCTTTGCTTGATTTTGACCAGTGGCTGCAATTACAAAGAAAGAACACATTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATGTATGTATGCATGTATGTATGTATGTATGTATGTATGTATCTATTCTAGCTATTTGTAGCACATGAACATTCTTGCACAACTCATAATTTTTCTTACCTCCTGCTGTTTTCTGTTGGAGTAGTTTTCTGCTTTTGCTTTGCATTAGTGGGCAGTTTTCTATTGTGTGATTTGTTTTGCCACACCGAGTGCAGTGGTTTTTGGTCTTCTCTATAATCTTCTCCACTATTCTCCTCTGTCTTACTGATTTTCTACCCTTTGTGTTAGCTATATCAGGATCTGCTATTTCTTCTTGTTCCACTGTTATTTCTTCTTCTGTTTCATCTGCAGGAACATTGTTCACTGTGTTACTTTGATGATGCGACGAGCTTTCAGGTACATCTTCAAGCATAGCATTTATCTTTCTGTCCAAGTTCTCAATCTCATTTAACATGCACTCATATGTTTCTTTCCTCTTTGATGCCTTTGATGCTATGTTGACTGACTTTCTTGACAGCACATTGAACCTCAACATTGAGCTGTTTCCATTGTATATTGGTCTGTCAGAAGTGCTTGTATGTTTCCTTTCTTTCTTCCTCCATCTTTCTATGATATACTTCTCAGGAATCTTTTTAATTTCTAGTGCCAACATAACTTTCAGGATATGGCAGCAGAGGATACCATCTTTGGAGAACTTCCCACATATGCAACTGTAGTTTTCTTGTGGTAAGTCAGTAATGACAACATATTTCCTTGGTCTCCACTCTTTCTTTGTTTGATTCAGAGCTATGAACACCTCATATATCTTTCCTTTTTTTATAGTATTCATTTCCATCCTTGTAGATTCTATTAGTTCTTCTTGGAATTTCTCAAATATGCTCAAGTTGTACAATTGTAATGCTTGTTCTTCAATGTAGTTTCTACACCATAGTATATCTGGTCTTTTAGTTCTTGATTCATGATCTTTGCTGTACTCAGTGCTGAATATAGTGTCATTTATGCTTTCATACTCATTCATGAAGCTCATCACACTATGCTTTGGTCCTACACTTCTTTTAAACCTTGCATTTGTGCCCTCACTTAATGCTGTGCTTTGAATGAAGGGGCAGAAGTCAGTCTTGAAATATACAGGCACAAATTGTTCTCTAGTTTTCCACATGTGTTCAAAATATTTGACATTGTGCAAGCTATATTTTTCAATCATTTGAGGCCATAAGCTTTCAAATTCCTCTCTTGTTAAACAATTGTTCACAATGTCCTCAAAATCTTTGTGCAGATCCTTCTTTGTTTTATCTGAAAATGTGCTTCCTGTCTTTTCTCTGCAATTTTTCTTAACATGGAATAGGCAATTTATGTGCTTTGTTTGTTTAAAAACTTGACGTATCGCAGACCTCATAGCATTGTCTTGATCAGTTATGATAGTTTGGGGATGCTTTTCACTCATTGCTGTCAGAAATGTTTCAAAAACCCACTTGAAAGTCTCTGTTGTTTCATCACCTAGAAAAGCACACCCAAACAAGCAAGTATTTCCATGGCCTGTGATGCCGACAAATGGAGCAAATGGCAGATTGTATTTGTTTGTTTGGTATGTTGTGTCAAAGCTGATAATATCCCCATATTCTGCATACAGCTCAATAGATCTGCCATCAGCCCAGAACATGTTTTTCACTTTGTTTTCCTCATCTAGCTGAAACTTATAATAGAAATCAGGGTCCTCTTGTTCTTTGTTCCTTAGGTAACTTAGTACCTGTTTCATATCAGCATTCCTTGTCTCTGAATTGATTGCTGTACAAACATTGCTAACATCTTTTTTGGTGTAAGGTAATGCTGCTAACCCTCCACGGAGAAAAGACAATATTGCAATCATATTCCTTATTGGTATGTTGCACTCTTTCAAAGTCTTTATCATCTTTTTCTCCTCTTCTGTCATGTTCTTATGTGAGCGAAGAAACTTCTTTTCTGTATTGGGACTAAGTTCATGGTTATGATTGAGCTCAAGCCTTATTATTTTCCACACTTTCCTCTCCTCTCGAACCACCATCACACACTTGCAGTCAGTCCTGATAATCACTTTTGTCTTCCTTCGCTGTTTTTTGTTGCTCTTTTTCTTCTTTTTGCCATCTGAATTTTTGCCATACCTGTAGCAGTTGTATGTGTATTTGGTTACCTCACCTTGTCTTTTCTTGCTTGTTGATTTCTAGTTGTGTGTTTTAACAACTGAGAATCCAGCTTGATAAGCGTAAAAGTTGAAGAAATCATACGCTTGATCAGAAGAATCAAATTGCATATTGATGTGAGGTATGCATCTGCTGTCAACTTCCTTGTGGCCTTCCTCCTCATTTTTCAGGAAATTGTCAATGTCCTCTTCATCTAAATATTCAGCATTTGTAGCTTCTGAAGCATCATTCATTTGAGTGTTGTTCTCATTTGTTTCTTGTCGACCTTCTTGAGCTGTTGTACTATCCATTGATTTGTCCAATACAGCATCATTTGTAAGAATGCCATCATTACTGATCTGAAAAATAAAAATCAGTGCTTATTAAGTCATTTAGCAAACTGTTTTTCAATGATAATTTTTTTTGCACTGTAATCATACCTGAGTATGTGAATTGTTTGAATACAAGTTTAGCCACTGTTCTTGTTCATCAATAGAAGATTCTCCAAGATTGTCGCCAGCAGTATATCTTGGATTTACCTGCATTATATATTTTTTTGCCATTTGTATTAATAAAATTGTTCTTTTTTCAAATAATACTTGTACACACATTTAATTCAAATTAAAACTTGTACAATCTTAAAATACCTCCAATCTGAATAGCTTGTTGTTTGATTTATATAACTCCTCCATAGTTTTCTCCTTTTCATTCTGCACAGATACATAATGTTAGCTTAGTTTAAAATAATACTGAACCGAATAATGAAGCGATGCTTCCTGAAAGTATAACCTCCGTCAATGGCTCTACAAATGTGTTGTTGTATATTTCATCAAATTCTTTGTAGTAACTCTCTGTTGTTGATACCTGCTAACATAGAATTGCAATTTTTCAGTACCTTACACCTCAATCCCAAAATGCAGATATAGAATATGTTAAATCTGTATCAAGAATTAAGAATTTTTGTATTACCTTTTGATGATATGTTTCTGTTGATTGCATTTGTTCATTTGTTGGTTCTGGAGTAAATCTACTTGTTGTCAAAATCATGGAGTTCTACAAGACATAATGATATAAAATATGTTAGTTTAATATATAGAAAATGATGGGATTCTACAAGTCGTAATGATATTTCCTTTTTTTTATATACAATTGCATTCATTACCTCAAATCCTAGCGGTGTTTGAAGTAGTTTCCTGTATATCTTAGCCCCTGAAAAAACATATGAAATCAATTAGTACAGAAAATCCTTGTCTCCTACATATTAAAATGGAAACAAAATTTTCTTTCTTCAAACACATACACATATTGACTTAGAATACAAACACATTACAGTAGGCTTTGTTGATCTGAACATAGTTTCGTAGCATTGTAATTTTCTAATCCCAGTGTATGAATATGAATTTTTGTATGAATTATACTAAAATTACAGTGCTATATGACTAAAATTACATATGTAAATTTAGTTACATATCACTGTAATTTTAATTTCTCAAAATTACAGTGCTATGAGACTAAATTTACATATGTAAATTTAGTCATATAGCACTGTAATTTTCTACTTCTAGGGTATAAATGTGAATTTGGTAGGCATTTTTTATATTCTGCATGCTGTAGTTTGGAATCTGAAATCAATTTATTTTTTGGTGGCAGGGAAGTGTGTGAGTTTGCAAAATAACAGACTTAAAAGTGCATAATTTAGTGTTGTATAAATTTTGCACTTATAGCTTACTACTGTAATGGCTTAGTATTCTAGTGTTTTATGTGTGGGATTTGCATTGTATAGTAGTTCAGTTTTGGGCTACAAGACTTTGTTTTACTATATATGACATCTCTAGGATTTTGGCAGACAGCTCTAGAGTTGTACTAAAATTACAGTGCAATATGACTAAATTTACATATGTAAATTTAGTCATATAGGACTGTAATTTCTCAAAATTACAGTGCTATGTAACTAAATTTACATATGTAAATTTAGTCATATAGGACTGTAATTTTCTATTTCTAGTGTATGAATGTGAATTTGGTAGGTGCTTTTTAAATCTGCAAGCTGCAGTTTGGAAGCTGAAATAAATTTTATTTTTTTTGGGTGGCAGGGAAGTGTGTGAGTAAGCATAATAACAGGCTTAGTCAGCCTACTGTAATGGCTTAGTATACTAGTGTTTTATGTGTGGGATTTGCATTGTAGAGTAGTTCAGTTTTGGGCTACAAGACTTTGTTTTACTATATTGTCAAAAGTAGTCAAATTGTTTCAGAGTCAAACTATATTGTTTTTTACAGGTGATTTGGTGCCCATAATTTCTAAGGCTGCTTGTAAATTGTTCTTTGTTTTTAAAATTTTAGGTGTATTTTCTAGGTGAATACATGTGTTTGTGCTGAAATTGAATTCTAGGTGAAATTGTGCTTGTGCTGATCAGGAATTGTTTTTTCTGAAGGAAATCACCAGATGGAGAACTGGAGTCTGAATGAATGTTTGATGCTGTTTGATGCAATTTTTTAAAGCCATCTGATGCCAGATCTAGTTTTTGAAGTGAGGGCAAAAGATTGCTCAAGCATGTACGACTACAGATGGATCAAGCAAAACTGAGATTATGATGAATCCAGGTAATCCCCTTTTTGTACTGACCTGTTGTTGTGTTGCTGATTTGCTGGTTTTGATTCACCAGCTGCTCGTCACCTTGAGTTTGATCGATTTGTTTCATTTTGTCTCTCTTTTTCCTGGTGCTCTCGGTGCTCTCCAT
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CDS seq | ATGGAGAGCACCGAGAGCACCAGGAAAAAGAGAGACAAAATGAAACAAATCGATCAAACTCAAGGTGACGAGCAGCTGGTGAATCAAAACCAGCAAATCAGCAACACAACAACAGGGGCTAAGATATACAGGAAACTACTTCAAACACCGCTAGGATTTGAGGTATCAACAACAGAGAGTTACTACAAAGAATTTGATGAAATATACAACAACACATTTGTAGAGCCATTGACGGAGAATGAAAAGGAGAAAACTATGGAGGAGTTATATAAATCAAACAACAAGCTATTCAGATTGGAGGTAAATCCAAGATATACTGCTGGCGACAATCTTGGAGAATCTTCTATTGATGAACAAGAACAGTGGCTAAACTTGTATGGCAAAAATTCAGATGGCAAAAAGAAGAAAAAGAGCAACAAAAAACAGCGAAGGAAGACAAAAGTGATTATCAGGACTGACTGCAAGTGTGTGATGGTGGTTCGAGAGGAGAGGAAAGTGTGGAAAATAATAAGGCTTGAGCTCAATCATAACCATGAACTTAGTCCCAATACAGAAAAGAAGTTTCTTCGCTCACATAAGAACATGACAGAAGAGGAGAAAAAGATGATAAAGACTTTGAAAGAGTGCAACATACCAATAAGGAATATGATTGCAATATTGTCTTTTCTCCGTGGAGGAAACTACATTGAAGAACAAGCATTACAATTGTACAACTTGAGCATATTTGAGAAATTCCAAGAAGAACTAATAGAATCTACAAGGATGGAAATGAATACTATAAAAAAAGGAAAGATATATGAGGTGTTCATAGCTCTGAATCAAACAAAGAAAGAGTGGAGACCAAGGAAATATGTTGTCATTACTGACTTACCACAAGAAAACTACAGTTGCATATGTGGGAAGTTCTCCAAAGATGGTATCCTCTGCTGCCATATCCTGAAAGTTATGTTGGCACTAGAAATTAAAAAGATTCCTGAGAAGTATATCATAGAAAGATGGAGGAAGAAAGAAAGGAAACATACAAGCACTTCTGACAGACCAATATACAATGGAAACAGCTCAATGTTGAGGTTCAATGTGCTGTCAAGAAAGTCAGTCAACATAGCATCAAAGGCATCAAAGAGGAAAGAAACATATGAGTGCATGTTAAATGAGATTGAGAACTTGGACAGAAAGATAAATGCTATGCTTGAAGATGTACCTGAAAGCTCGTCGCATCATCAAAGTAACACAGTGAACAATGTTCCTGCAGATGAAACAGAAGAAGAAATAACAGTGGAACAAGAAGAAATAGCAGATCCTGATATAGCTAACACAAAGGGTAGAAAATCAGTAAGACAGAGGAGAATAGTGGAGAAGATTATAGAGAAGACCAAAAACCACTGCACTCGGAATAATACAAGCTTCCCAAGATCCAAGGAAGAGGCAGAAGACATACCGAAGTGA
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Protein seq | MESTESTRKKRDKMKQIDQTQGDEQLVNQNQQISNTTTGAKIYRKLLQTPLGFEVSTTESYYKEFDEIYNNTFVEPLTENEKEKTMEELYKSNNKLFRLEVNPRYTAGDNLGESSIDEQEQWLNLYGKNSDGKKKKKSNKKQRRKTKVIIRTDCKCVMVVREERKVWKIIRLELNHNHELSPNTEKKFLRSHKNMTEEEKKMIKTLKECNIPIRNMIAILSFLRGGNYIEEQALQLYNLSIFEKFQEELIESTRMEMNTIKKGKIYEVFIALNQTKKEWRPRKYVVITDLPQENYSCICGKFSKDGILCCHILKVMLALEIKKIPEKYIIERWRKKERKHTSTSDRPIYNGNSSMLRFNVLSRKSVNIASKASKRKETYECMLNEIENLDRKINAMLEDVPESSSHHQSNTVNNVPADETEEEITVEQEEIADPDIANTKGRKSVRQRRIVEKIIEKTKNHCTRNNTSFPRSKEEAEDIPK |
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Function | Protein FAR1-RELATED SEQUENCE 3 [UniProtKB/Swiss-Prot:Q9ZVC9] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_07G003130 | OsN22_07G003130_01 | Chr07 | 2766871 | 2772079 | - | NAM | ||
CDS seq | ATGGAGAGCACCGAGAGCACCAGGAAAAAGAGAGACAAAATGAAACAAATCGATCAAACTCAAGGTGACGAGCAGCTGGTGAATCAAAACCAGCAAATCAGCAACACAACAACAGGGGCTAAGATATACAGGAAACTACTTCAAACACCGCTAGGATTTGAGGTATCAACAACAGAGAGTTACTACAAAGAATTTGATGAAATATACAACAACACATTTGTAGAGCCATTGACGGAGAATGAAAAGGAGAAAACTATGGAGGAGTTATATAAATCAAACAACAAGCTATTCAGATTGGAGGTAAATCCAAGATATACTGCTGGCGACAATCTTGGAGAATCTTCTATTGATGAACAAGAACAGTGGCTAAACTTGTATGGCAAAAATTCAGATGGCAAAAAGAAGAAAAAGAGCAACAAAAAACAGCGAAGGAAGACAAAAGTGATTATCAGGACTGACTGCAAGTGTGTGATGGTGGTTCGAGAGGAGAGGAAAGTGTGGAAAATAATAAGGCTTGAGCTCAATCATAACCATGAACTTAGTCCCAATACAGAAAAGAAGTTTCTTCGCTCACATAAGAACATGACAGAAGAGGAGAAAAAGATGATAAAGACTTTGAAAGAGTGCAACATACCAATAAGGAATATGATTGCAATATTGTCTTTTCTCCGTGGAGGAAACTACATTGAAGAACAAGCATTACAATTGTACAACTTGAGCATATTTGAGAAATTCCAAGAAGAACTAATAGAATCTACAAGGATGGAAATGAATACTATAAAAAAAGGAAAGATATATGAGGTGTTCATAGCTCTGAATCAAACAAAGAAAGAGTGGAGACCAAGGAAATATGTTGTCATTACTGACTTACCACAAGAAAACTACAGTTGCATATGTGGGAAGTTCTCCAAAGATGGTATCCTCTGCTGCCATATCCTGAAAGTTATGTTGGCACTAGAAATTAAAAAGATTCCTGAGAAGTATATCATAGAAAGATGGAGGAAGAAAGAAAGGAAACATACAAGCACTTCTGACAGACCAATATACAATGGAAACAGCTCAATGTTGAGGTTCAATGTGCTGTCAAGAAAGTCAGTCAACATAGCATCAAAGGCATCAAAGAGGAAAGAAACATATGAGTGCATGTTAAATGAGATTGAGAACTTGGACAGAAAGATAAATGCTATGCTTGAAGATGTACCTGAAAGCTCGTCGCATCATCAAAGTAACACAGTGAACAATGTTCCTGCAGATGAAACAGAAGAAGAAATAACAGTGGAACAAGAAGAAATAGCAGATCCTGATATAGCTAACACAAAGGGTAGAAAATCAGTAAGACAGAGGAGAATAGTGGAGAAGATTATAGAGAAGACCAAAAACCACTGCACTCGGAATAATACAAGCTTCCCAAGATCCAAGGAAGAGGCAGAAGACATACCGAAGTGA
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Protein seq | MESTESTRKKRDKMKQIDQTQGDEQLVNQNQQISNTTTGAKIYRKLLQTPLGFEVSTTESYYKEFDEIYNNTFVEPLTENEKEKTMEELYKSNNKLFRLEVNPRYTAGDNLGESSIDEQEQWLNLYGKNSDGKKKKKSNKKQRRKTKVIIRTDCKCVMVVREERKVWKIIRLELNHNHELSPNTEKKFLRSHKNMTEEEKKMIKTLKECNIPIRNMIAILSFLRGGNYIEEQALQLYNLSIFEKFQEELIESTRMEMNTIKKGKIYEVFIALNQTKKEWRPRKYVVITDLPQENYSCICGKFSKDGILCCHILKVMLALEIKKIPEKYIIERWRKKERKHTSTSDRPIYNGNSSMLRFNVLSRKSVNIASKASKRKETYECMLNEIENLDRKINAMLEDVPESSSHHQSNTVNNVPADETEEEITVEQEEIADPDIANTKGRKSVRQRRIVEKIIEKTKNHCTRNNTSFPRSKEEAEDIPK
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0141500 | SBH | 0.093649 | 0.135214 | 0.915561 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g01270 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os07g0141500 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0010680 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0000240 | SBH | 0.0 | 0.0 | 0.000000 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0010640 | SBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0022040 | SBH | 0.000000 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0022190 | SBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0036900 | RBH | 2.443092 | 3.0872255 | 4.310263 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010870 | SBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0126700 | SBH | 0 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0021910 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0022080 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0003050 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0011640 | SBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0013290 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G011060 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0002930 | RBH | 0.0 | 0.0 | 0.0 |