Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_05G010310 | OGI:04041240 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr05:13453161-13453502 | ||||||||
| Gene Symbol | DUF668-10, OsDUF668-10, DUF668-9, OsDUF668-9 | ||||||||||
| DNA seq | ATGGCTCACCGACCTGCGTGGCTGCGTGTGCGGTTCAGCGGCGGTGGCGGCGCCAGGGAGGAGACAGGGCTCAAGATCCTGGCGTTCGAGGTGGCGGCGGCCATGTCGCGGCTCGTGTCGCTCTACTGCTCATTGTCTGACGTGGAGGACAGGAGGCTCCGCGTGGATGCGCTGCTCGCCGAGGGCGTCGCGCGCGTCACATCCACGGACCAGTCGCTCCTGCTCTGGCTCGCGTGTGGCGAGGTCGTGGCGGACCTCGACCGTGCCGCCGGCAGCGCCACGCGGTTCGGGACGCGGTGCTGCGTGGCGCGCCGTTCCTGCACGATTTTCGACCGCGTCTAG |
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| CDS seq | ATGGCTCACCGACCTGCGTGGCTGCGTGTGCGGTTCAGCGGCGGTGGCGGCGCCAGGGAGGAGACAGGGCTCAAGATCCTGGCGTTCGAGGTGGCGGCGGCCATGTCGCGGCTCGTGTCGCTCTACTGCTCATTGTCTGACGTGGAGGACAGGAGGCTCCGCGTGGATGCGCTGCTCGCCGAGGGCGTCGCGCGCGTCACATCCACGGACCAGTCGCTCCTGCTCTGGCTCGCGTGTGGCGAGGTCGTGGCGGACCTCGACCGTGCCGCCGGCAGCGCCACGCGGTTCGGGACGCGGTGCTGCGTGGCGCGCCGTTCCTGCACGATTTTCGACCGCGTCTAG |
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| Protein seq | MAHRPAWLRVRFSGGGGAREETGLKILAFEVAAAMSRLVSLYCSLSDVEDRRLRVDALLAEGVARVTSTDQSLLLWLACGEVVADLDRAAGSATRFGTRCCVARRSCTIFDRV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_05G010310 | OsN22_05G010310_01 | Chr05 | 13453161 | 13453502 | + | NAM | ||
| CDS seq | ATGGCTCACCGACCTGCGTGGCTGCGTGTGCGGTTCAGCGGCGGTGGCGGCGCCAGGGAGGAGACAGGGCTCAAGATCCTGGCGTTCGAGGTGGCGGCGGCCATGTCGCGGCTCGTGTCGCTCTACTGCTCATTGTCTGACGTGGAGGACAGGAGGCTCCGCGTGGATGCGCTGCTCGCCGAGGGCGTCGCGCGCGTCACATCCACGGACCAGTCGCTCCTGCTCTGGCTCGCGTGTGGCGAGGTCGTGGCGGACCTCGACCGTGCCGCCGGCAGCGCCACGCGGTTCGGGACGCGGTGCTGCGTGGCGCGCCGTTCCTGCACGATTTTCGACCGCGTCTAG
More
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| Protein seq | MAHRPAWLRVRFSGGGGAREETGLKILAFEVAAAMSRLVSLYCSLSDVEDRRLRVDALLAEGVARVTSTDQSLLLWLACGEVVADLDRAAGSATRFGTRCCVARRSCTIFDRV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0457600 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g23840 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0457600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0019660 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0019600 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0019480 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0019490 | SBH | 0.0 | 0.019584 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0019620 | SBH | 0.0 | 2.299042 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0329500 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0019210 | SBH | 0.0 | 0.107146 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0341800 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0019450 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0019430 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0019490 | SBH | 1.573636 | 4.469337 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0019590 | SBH | 0.0 | 0.0 | 0.153781 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0019600 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G002500 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0010630 | RBH | 0.0 | 0.0 | 0.0 |
