Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_05G007760 | OGI:05020660 | 15/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr05:7484530-7492172 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAGAGAGTACACTAAAAAGGCAGTGGCTATGGAACAGAAAAACCTAGCTCCACTCCCACTCCTGCAGTAGAATCTATACTGTTTGGCACAGCGGAAGCTGTAGGTAGGGCATCGTCCAAACTCCAAACTCCATTTGCATTTCTGGGCGGAGGAACAGCCGCCGGCGATCAGGGCTAGAGAGCTCGCCGTGGACAGCCTCCTCCTAGCTCCCCTCTCCCCGCCGCACGCCGTCTCCTCCAATCTGCGGCCTGACCTCCTCGCGCGCTCGGCCGGCACGGCAAGAAAGGCTGACCTCCGTCTCCGTTCGAATCGGAGCCGAAGGTATATCCATCCCTTCTTCTCTCCCTCTTCCTCCTCGCCACTTCATGACGCACGTATGACCTGGCCTGGCCGTGTGACCTGAGTTGGAGATCAATCCGAGGGGGTTTGGATTGATTTCTTAATTTCTTCCTTTCCCTCGAATCAACCCATCCGACTAGGTGTGTTTGATTCGTCATGTTGTACTAATGTCAGTTCGTTTCCAAGATTTTGGGGTCCATGCCACACGTTAGGTAGGCCCCTGATGAACGCACGTATGCTCCCTGATTGGGGTAAAATAAAAAATTGGGGAAACCCTGGTAGATTCTCCAAAACCTCACCTTGAAATTTGTCCAAGTGTGTCCGTTGCTTGACTATCCAATCAAGCTGAAATGTTGACAGTAATCTGTAAAATCCTATTCACATTTGTAGCTACTTAGACCATCGCTTAGGCAGATTGATGGTTTTATTATGAAGTCTTGATTGATTTTGTTCACATAAAAAAAAACTCTGCACGAATTGAAGGCTGGGGCTAATTAGTACACGTTGAATATGGAAATCACCCTTCCTAAATCGGCGCGGTCTCTTTCGATTATATGAGGCTGTATTCTACAATTGTGTGTATGATCTAATGATGGCAGAGATCTAGTAATACTAGTTAAGATGATAAATTCCTGGTGTGCGGTTGAGAGCAGGGAAATGCACTAGTGGGAACAAACCAGTTCAGGTCACTAGTTTGATCGCATGATAATATAGAGTGTATGCATTCATGTAGCTTCCGTATGATAAGGTCTTGTACAAGTGCTTTTTTTTTTTTCGCCGGGCCTGTGAAGAGACACCAGTCGATTTCATTGGATTGGAAGGAAACAAATTACAAAGATTGTTCAGGTTATATGACAACAGTCAGGGCAGTTGGAAGGGAAGCCATTCCCCAGTAGGGGGGACAAGCTACGAGTATAAAGCAGAGAAACGTATAAGTGCATTTGCAGGAAACAGTGGACCTGCTATCTTATCTTATACTTCCTCCGTCCCATAATATAATGGATTTTGAGTTTTTGCTTGTAACGTTTGACCACTTGTCTTATTCAAAATTTTTTAAAATTATTAATTATTTTATTTGTGACTTACTTTATTATCTATGGTACTTTAAGCACAACTTTTCATTTTTTATATTTGCAAAAGAAAATTGAATAAGACGAGTAGTCAAATGTTGAAAGCAAAAACTGAAAATCCCTTATATTGTGGGACGGAGGGAGTAGTATAATAGCGTAAGCATTTCCAGAACGTTTGTTTGAGAAGGTCTTATACATGCGCATTTCACAATAGGAAGCAATGGAACTGCTAGCCCAGATGGTTTGTCCTCACTTGAGTTAGTTTGTAGGTGCCGGGCTCAAAACCAGCTGTGTGGGCTATTTCTAGCATTTGTGAGTAACTGCGGGTTGGGTTGCCTCGGCCACCCAGGCAAATCAAAAATCTCCAGGCCAGTTGTAACTTCTATCTGATGGACGGACTGGCCCAAGTGATGCTTTTTTTCTGTTCAAACTGCGGGGTGGTCCAAGTCTGATAGCAATATGCTGCTGCGCAAGGGTTTCAGATTTTCTTATTTCCCTTGTTTCTCCTGGACAATAGAGCACAGCTCTCTTGGTAGATCCTTTTTTAAAAAAGGAAAATCATAAGCGTCCTTTTCTACGCCTACTGTATGTCTGTATGTGGTGCATATTGGTAGATATCTTTAATACCGAAATCAGGGCTATGGATCTGGCTTTTTATTGGGCCACGTGGCTCCCTAAAAATTTGGTTACACCCCCTCCAAAAATTTGCCACGTGTCAAAGCGACGGTATTCACTCTCCGAGAGATCGGGAAAACGTTCGCCTATATACGCTTGCAACGTGGGCCAGGCATCTCGCAAGGCCATGCGAGCTTGGGGCTGGCGTCGCACGGCCTTTCTCCGCAATGTACCTGCGCTGCTGCGCATGGTCCTCATGCAGCGTGAAGCTAGCACATACAGGTACAGATTACTAAGCCAGTTTAGAATAAAATAATATGTATAAAAAAAACGAGAAAAAATAATAGGATTTTTAGCCTTTGCATAATAATCTTTTAACAAATGCAATTTACTACAGATTACTCGGAATGAGGAAAAGTCACTTCATGTTAATATCATGTGTTTCAAGAGAATAAAATAAATAAATAGTTAAATCAAATGGAAAAAAAATAGTGACAGCAAGGATTGCGTTAGGACAATTAAAAATCTTCAGATAAGATTTACTTGAAACGAGGAAAATACCTTAATTTCTATAGAATGGAAAGAATAGAAGTGAAATTTCCATGTGAACCGAGAAGTTTATAACTACTTTCCTATTAATTCAGAGTATTTTTGTTTTTTTTTCTCCTCACATTATACTTTTTTATGTTAGGAATTCATTTATTTTAGAACATTGGTAAGTAACAACAATCATATTGCTATTTTTTTTATTGCGAAACACAATAGATATAGATGTTCATATACACGTGTGTATACACACCTGTAAACGCACACATACATACCCAATCACTACAAGCACCTCCGAAAATTGGGCCGTCAGGCATATCTTAGGAGTGATGAAGAATGGTGGGTTTCCTACCATTGAAAAAACAAATAGCCGTAAATACAAGCGTCTATGCTAAGTTTAGAACTTAACTCGTATAGGTAGAGAACGTGACCAGCTGAGCTCTACATAGTAGTATATCTAGATATATGAAGTCAAAATAAGTGTCTTTACCATGTCATCGTCCTTTATTTCTAAATTAAATTAGTATAAAATTTAGGTAATCGAAGACACGTTTATTTCGGATATGTATTTCCTACTAATATGAACTCAATGGCTTACATCTATATGTTGGATATTAATAAAACATGTATTTTACTAATGTACATCATCTTTAGTCGTTTCTCGATGTTATATAGTCTGTTCAGCATGACAATACCACTAATCTAGATGATTTTACTATTCTACCTTATTTTGTTCACAAACATAAAAATAAAAGGGAATGGACTTTCAACAATCCTTTTCGATGTATGATTTCTGAAGGGAAATACACACATGCTATAAACTAACTTAGCTAGCGTGACAACTGGCACGCTCATTTTCTAGTTACATTCTTAAAATGTGTACTAGCATAGAATTAAGGATACCATTAAATTGAACTTTAATTAAGTGCATATGCCTAAAATTGTTGGATCACGGTTTTACATGATGGGTTACAAGACCGAGGCTTATTATATCCTATCATTTCCAGCATGTACTTGCATTATCCATTTTTTCTTTACCATTTAATTTTTTGCTCCTTAGTGTTTATATGCTGAATTGTTGGTGCAAACATGAGAAAATTTGGTTTATATGTCCTTGAAAATATCTGCAAAATTTTATATTCTTTGTATCAGCACAGTAAGTATGCATATTTATGCCCTTGATAGCATAAGACACAACATTCCTAGCTTTGTGCAGTAATCTCTTAAGCATTTGTGGATGTTATTCTGATTCAAAGATTGACACAACCACATAGGCTGACATCTTGTATATTGGGACCTTTGGCAGGCAATCGGCCATGGTTTTCCTTAAGGTGGATATGTCTTGGAATGTGTTGATCTCACCTAGCGAGCTGAGCCCCAAGGGTCTCTTGCTCCGCAAGGCTGTCATTGTTAGTCTTCTGGAGGAGATAGCAAACAGGAAGGCCTCCAAGGATCATGGTTACTACATTGCTGTCAGTGAGCTGAAGGCGATATCAGAAGGGAAAGTGCGCGAGCTGACCGGAGATGTTCTTTTCCCAGTGACATTCACCTGCATCACACAGAAGCCTACGAAGGGCGAGATCTTAGTTGGCTCTGTGGATAAGATCCTCAAGCATGGCGTGTTCCTCAAATCTGGACCAATAGAAAGCATCTTCCTGTCAGAGAAGACACTGAGCGACTACAAGTACATCGGTGGGGAGAACCCTATGTTCATGAATGACCACTCGAAGCTGGAGGACACCGCTGTGCGCTTCAAGGTGATGGGTTTCCGCTGGATGGAAGCTGATCGCCAGTTCCAGATCCTTGCTACCCTGGCTGGTGACTATCTTGGGCCACTATGAACTGCTTCCACAGGTTAGTGGTGATGAATGGATCTGAAATGTATTATCTTTAACCTGCTGTCTGTAGTTTGATGTCATGATGATGATGATTAGACCAGTAGCTGTGATGCTGGCTGTTGATGTAAGTGACATTTGGCCCTATGTTTAGCATTTCAGCATGATGCGAATTGTCATGGCCGTTTAACCTCTGTTTCCTATCGCTGCTCACAGTTCTCCTATGCATATATTTGCTGCATTCCTTTCTGAGATATTTGCCTTTGCAACGTCGAATTTGCAATATTTCTCTGTGCAATTGTTTCCTTGTGTTACAATCAGCTTAATATGCAAGTAACATCAAAATACCCCAGATGTTACCCTGACAAGCAAATCATTTTTGCCACAAATTAGTCTATGACAGCTAGTAGTAGTTGGCACTTGGCAAATCGTGTTGTCTGCTTCAGTTTGCTCTTTGCTACACACTTTTTGCCGAGAGAAGTAGAAAGCTTTAAATTTTACAAAGAAATTTCTTTTTTTCCTATGTTAATTCAAATTGAGTCAATCATATGGTGATTCGTGAACGACCATCTAGCTTCAGGAGAAATTAACGATCTGCAACCGGGTTTCAGAGGAAGTTTCTCTGCAAAATGCATCTCTGATTTACAGTGGAGCTCGAGAAATGAAATAGATTTAAGTCTGAATTCCAATTAATCTATCCATAGTTGGACGCAGGGCTAGTCACTGATTTTGGCAAGTGGCAACTGATTAATCCGGCCCCTAAATGGCACAGTGAATTGATGTTTTTTATACCGAAGGGCAACAATTTGTTTAGATGTACAATAATATTGTTTACGACTTGTTAATAATGTGAGGCAATAATAAAGCATTCACTGTCCGTAGCCAACAATATAGGAGATGGACTTCAATTGTGCAATATAATTTTGAAGAATAAATGAAAGAAAAAACTGTTTTTCTTTTCTGAAAGTTGACCAAAAGTCATCATTCCAAGTCGTTGCCGTGTCGTGTCTGATACATCATTTTTGTTTTCTCTATCTATCAAAATCATCATCAATCCATGTGTATCTTTAGCATGACTGAACAAAGTTCGCCATTAACAACCTGACTTGCCTAGAGCCATAGCAGCCTGTGCATGTTCATCCCATACGGTAACACCATTAGCTATGTTTTCTTGTGCTTTGTACTACTGCTTTTATGCCTTTATCATCCTCCTTTCTACCTCCCATGCCGAAGAATTCATCTACAATGGATTCACTGATGCTGATCAGCTAACACTCGAAGGTGAAGCTTCAATTGACAGGAATCGCTTAGGGCTAACAAGTCGCCTTAACATAGGAGGTTTTGGCCATGCCTTCTACAAGTATCCTCTAAACTTTAGAAAGAACTCAAATAGTCCCAATGACCCCTCCTTTGCTACAACATTCGTGTTCACTATTACTACTTGGAGAGATCAGCCTCAAGAAGCAGGAAGTGATGGTATTGCCTTTGTGCTTTCTTCCACCAACAAGTTGATAAACCACTCCTTGGGAGGTCAGTACCTAGGCCTTTTCAATGCGTCGAATACTTCACAAAATATATTAGCTATCGAGCTTGATACCTTCATGAATCCTGATTTGAACGACATGGATGATAACCATGTTGGAATAGATGTCAACAGCTTGATTTCAATCAACTCCCATACCGCTGGGTTCTACACCTCTGATGGTGGATTCCAACTCCTTAGGCTTGCCAATGGTAGATCTCCAATATTGCAGCTATGGGTGGACTATGATGGCAAAGCTCACCAACTAAATGTCACCTTAGGTCTTCCCTATTCCCCTAAACCTGAATATCCGCTACTTTCGAGCATCGTCAATCTCTCATTCTTGTTACCAAGTTCTTCGTACATTGGGTTTTCCGCGTTGGAAAACTAGACATTTTATTCTAGGTTGGAGCTTCAAGGAAAATGGGAGAGTCCCACCCCTTCCTTCAGTCCCAGTCACAGACCCAGAAACATATGGATGGGGAGGCAACTTCTTTGCACCACCACCACCTCCACAGCTAACACACACCAAGTTCACAAACACTCCTTGCAAATTCTCCTACCAATAGTTATGACTTCAGTTATCTTGCTTCTTCTTGTTGCTTTCCTTGGTTGGCGGAAAAAAGCTGGGCCACAAGAAGACTGGGAAATGAAGTGCAAGCCACCATCTTTCATATACAAAGATCTATATAATGCAACTTCTGGGTTCAGTGACAAAATGCTCCTTGGGAAGGGAGGGTTTGGGAAAGTTTACAGAGGATTTCTTCCTGCCTCTAAGCGGAATGTCGCGATCAAGCGCATCTCCCCAGAGTCGAAGCAAGGGATGAAGGAGTTTATGTCTGAAGTTGCAATACTAGGCAATGTTCGTCACCGGAGTCTTGTTCAGTTACTTGGCTATTGCAGGAACAAGCACGAGCTCCTCTTGGTTTATGATTATATGCCCAATGGCAGCCTTGATAAATATTTGTATGGTCGACACAAATTGGCTTTAGGTTGGTCTCAAAGATTTCGCATCATCAAAGGTGTCACGTGTGGACTCGCTTACCTCCATGAGGAATGGGAGCGTGTGATCATCCATTGAGATATCAAGTCAAGCAACGTATTGCTTGACGAGGAAATGAATGGAAGGTTGGGTGATTTTGGCCTTGCAAGATTACATGATCTCGGAGTTGATGCCTACACCACACATGTAGCAGGCACATATGGTTACATTGCTCCAGAGCTAGCTAGGCTTGGAAAATCAACCAAGGGTACCGATGTTTTCGCATTTGGGGTGTTCATGATGGAGGCTGCACGTGGAAAGAGGCCAATTGAGGTGAATTCCTGTGGAGAACCTCAAGCGCTAGCAGATCATGTGCTCAATGCGTGGCAACGCAGTTCAATCATAAACTCCATAGATCCAAGTCTGGAAGATCACGTTGCAGAGGAGGTAGTATTAGTTTTAAAGCTTGGGCTTCTATGTTCACATTCATCGCCCAAGGTGAGGCCTAGCATGCGCTTAGTGATGCAATACCTGGAAAGGGAAGCAACGCTCCAGGACTTCGCATTTAGTTTCTTCAGCATCAATGAAGCTAATAATGAAGTTTATGGTCAGCATGGTGTATCAAATCCCTCTGTAGCAACCACCATAACCACTCTTTCTGGAGGAAGATGACGGTTGTTGCAGCATGTATTTTCTATATGATCATATACAATTTTACATCATTGTGTCGACTG
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| CDS seq | ATGGTTTTCCTTAAGGTGGATATGTCTTGGAATGTGTTGATCTCACCTAGCGAGCTGAGCCCCAAGGGTCTCTTGCTCCGCAAGGCTGTCATTGTTAGTCTTCTGGAGGAGATAGCAAACAGGAAGGCCTCCAAGGATCATGGTTACTACATTGCTGTCAGTGAGCTGAAGGCGATATCAGAAGGGAAAGTGCGCGAGCTGACCGGAGATGTTCTTTTCCCAGTGACATTCACCTGCATCACACAGAAGCCTACGAAGGGCGAGATCTTAGTTGGCTCTGTGGATAAGATCCTCAAGCATGGCGTGTTCCTCAAATCTGGACCAATAGAAAGCATCTTCCTGTCAGAGAAGACACTGAGCGACTACAAGTACATCGGTGGGGAGAACCCTATGTTCATGAATGACCACTCGAAGCTGGAGGACACCGCTGTGCGCTTCAAGTTTGATGTCATGATGATGATGATTAGACCAGTAGCTGTGATGCTGGCTGTTGATCTAACACTCGAAGGTGAAGCTTCAATTGACAGGAATCGCTTAGGGCTAACAAGTCGCCTTAACATAGGAGGTTTTGGCCATGCCTTCTACAAGTATCCTCTAAACTTTAGAAAGAACTCAAATAGTCCCAATGACCCCTCCTTTGCTACAACATTCGTGTTCACTATTACTACTTGGAGAGATCAGCCTCAAGAAGCAGGAAGTGATGGTATTGCCTTTGTGCTTTCTTCCACCAACAAGTTGATAAACCACTCCTTGGGAGGTCAGTACCTAGGCCTTTTCAATGCGTCGAATACTTCACAAAATATATTAGCTATCGAGCTTGATACCTTCATGAATCCTGATTTGAACGACATGGATGATAACCATGTTGGAATAGATGTCAACAGCTTGATTTCAATCAACTCCCATACCGCTGGGTTCTACACCTCTGATGGTGGATTCCAACTCCTTAGGCTTGCCAATGCTGGGCCACAAGAAGACTGGGAAATGAAGTGCAAGCCACCATCTTTCATATACAAAGATCTATATAATGCAACTTCTGGGTTCAGTGACAAAATGCTCCTTGGGAAGGGAGGGTTTGGGAAAGTTTACAGAGGATTTCTTCCTGCCTCTAAGCGGAATGTCGCGATCAAGCGCATCTCCCCAGAGTCGAAGCAAGGGATGAAGGAGTTTATGTCTGAAGTTGCAATACTAGGCAATGTTCGTCACCGGAGTCTTGTTCAGTTACTTGGCTATTGCAGGAACAAGCACGAGCTCCTCTTGGTTTATGATTATATGCCCAATGGCAGCCTTGATAAATATTTGTATGGTCGACACAAATTGGCTTTAGATATCAAGTCAAGCAACGTATTGCTTGACGAGGAAATGAATGGAAGGTTGGGTGATTTTGGCCTTGCAAGATTACATGATCTCGGAGTTGATGCCTACACCACACATGTAGCAGGCACATATGGTTACATTGCTCCAGAGCTAGCTAGGCTTGGAAAATCAACCAAGGGTACCGATGTTTTCGCATTTGGGGTGTTCATGATGGAGGCTGCACGTGGAAAGAGGCCAATTGAGGTGAATTCCTGTGGAGAACCTCAAGCGCTAGCAGATCATGTGCTCAATGCGTGGCAACGCAGTTCAATCATAAACTCCATAGATCCAAGTCTGGAAGATCACGTTGCAGAGGAGGTAGTATTAGTTTTAAAGCTTGGGCTTCTATGTTCACATTCATCGCCCAAGGTGAGGCCTAGCATGCGCTTAGTGATGCAATACCTGGAAAGGGAAGCAACGCTCCAGGACTTCGCATTTAGTTTCTTCAGCATCAATGAAGCTAATAATGAAGTTTATGGTCAGCATGGTGTATCAAATCCCTCTGTAGCAACCACCATAACCACTCTTTCTGGAGGAAGATGA
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| Protein seq | MVFLKVDMSWNVLISPSELSPKGLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTGDVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTLSDYKYIGGENPMFMNDHSKLEDTAVRFKFDVMMMMIRPVAVMLAVDLTLEGEASIDRNRLGLTSRLNIGGFGHAFYKYPLNFRKNSNSPNDPSFATTFVFTITTWRDQPQEAGSDGIAFVLSSTNKLINHSLGGQYLGLFNASNTSQNILAIELDTFMNPDLNDMDDNHVGIDVNSLISINSHTAGFYTSDGGFQLLRLANAGPQEDWEMKCKPPSFIYKDLYNATSGFSDKMLLGKGGFGKVYRGFLPASKRNVAIKRISPESKQGMKEFMSEVAILGNVRHRSLVQLLGYCRNKHELLLVYDYMPNGSLDKYLYGRHKLALDIKSSNVLLDEEMNGRLGDFGLARLHDLGVDAYTTHVAGTYGYIAPELARLGKSTKGTDVFAFGVFMMEAARGKRPIEVNSCGEPQALADHVLNAWQRSSIINSIDPSLEDHVAEEVVLVLKLGLLCSHSSPKVRPSMRLVMQYLEREATLQDFAFSFFSINEANNEVYGQHGVSNPSVATTITTLSGGR |
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| Function | L-type lectin-domain containing receptor kinase SIT2 [UniProtKB/Swiss-Prot:Q7XUN6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_05G007760 | OsN22_05G007760_01 | Chr05 | 7488416 | 7492172 | + | NAM | ||
| CDS seq | ATGGTTTTCCTTAAGGTGGATATGTCTTGGAATGTGTTGATCTCACCTAGCGAGCTGAGCCCCAAGGGTCTCTTGCTCCGCAAGGCTGTCATTGTTAGTCTTCTGGAGGAGATAGCAAACAGGAAGGCCTCCAAGGATCATGGTTACTACATTGCTGTCAGTGAGCTGAAGGCGATATCAGAAGGGAAAGTGCGCGAGCTGACCGGAGATGTTCTTTTCCCAGTGACATTCACCTGCATCACACAGAAGCCTACGAAGGGCGAGATCTTAGTTGGCTCTGTGGATAAGATCCTCAAGCATGGCGTGTTCCTCAAATCTGGACCAATAGAAAGCATCTTCCTGTCAGAGAAGACACTGAGCGACTACAAGTACATCGGTGGGGAGAACCCTATGTTCATGAATGACCACTCGAAGCTGGAGGACACCGCTGTGCGCTTCAAGTTTGATGTCATGATGATGATGATTAGACCAGTAGCTGTGATGCTGGCTGTTGATCTAACACTCGAAGGTGAAGCTTCAATTGACAGGAATCGCTTAGGGCTAACAAGTCGCCTTAACATAGGAGGTTTTGGCCATGCCTTCTACAAGTATCCTCTAAACTTTAGAAAGAACTCAAATAGTCCCAATGACCCCTCCTTTGCTACAACATTCGTGTTCACTATTACTACTTGGAGAGATCAGCCTCAAGAAGCAGGAAGTGATGGTATTGCCTTTGTGCTTTCTTCCACCAACAAGTTGATAAACCACTCCTTGGGAGGTCAGTACCTAGGCCTTTTCAATGCGTCGAATACTTCACAAAATATATTAGCTATCGAGCTTGATACCTTCATGAATCCTGATTTGAACGACATGGATGATAACCATGTTGGAATAGATGTCAACAGCTTGATTTCAATCAACTCCCATACCGCTGGGTTCTACACCTCTGATGGTGGATTCCAACTCCTTAGGCTTGCCAATGCTGGGCCACAAGAAGACTGGGAAATGAAGTGCAAGCCACCATCTTTCATATACAAAGATCTATATAATGCAACTTCTGGGTTCAGTGACAAAATGCTCCTTGGGAAGGGAGGGTTTGGGAAAGTTTACAGAGGATTTCTTCCTGCCTCTAAGCGGAATGTCGCGATCAAGCGCATCTCCCCAGAGTCGAAGCAAGGGATGAAGGAGTTTATGTCTGAAGTTGCAATACTAGGCAATGTTCGTCACCGGAGTCTTGTTCAGTTACTTGGCTATTGCAGGAACAAGCACGAGCTCCTCTTGGTTTATGATTATATGCCCAATGGCAGCCTTGATAAATATTTGTATGGTCGACACAAATTGGCTTTAGATATCAAGTCAAGCAACGTATTGCTTGACGAGGAAATGAATGGAAGGTTGGGTGATTTTGGCCTTGCAAGATTACATGATCTCGGAGTTGATGCCTACACCACACATGTAGCAGGCACATATGGTTACATTGCTCCAGAGCTAGCTAGGCTTGGAAAATCAACCAAGGGTACCGATGTTTTCGCATTTGGGGTGTTCATGATGGAGGCTGCACGTGGAAAGAGGCCAATTGAGGTGAATTCCTGTGGAGAACCTCAAGCGCTAGCAGATCATGTGCTCAATGCGTGGCAACGCAGTTCAATCATAAACTCCATAGATCCAAGTCTGGAAGATCACGTTGCAGAGGAGGTAGTATTAGTTTTAAAGCTTGGGCTTCTATGTTCACATTCATCGCCCAAGGTGAGGCCTAGCATGCGCTTAGTGATGCAATACCTGGAAAGGGAAGCAACGCTCCAGGACTTCGCATTTAGTTTCTTCAGCATCAATGAAGCTAATAATGAAGTTTATGGTCAGCATGGTGTATCAAATCCCTCTGTAGCAACCACCATAACCACTCTTTCTGGAGGAAGATGA
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| Protein seq | MVFLKVDMSWNVLISPSELSPKGLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTGDVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTLSDYKYIGGENPMFMNDHSKLEDTAVRFKFDVMMMMIRPVAVMLAVDLTLEGEASIDRNRLGLTSRLNIGGFGHAFYKYPLNFRKNSNSPNDPSFATTFVFTITTWRDQPQEAGSDGIAFVLSSTNKLINHSLGGQYLGLFNASNTSQNILAIELDTFMNPDLNDMDDNHVGIDVNSLISINSHTAGFYTSDGGFQLLRLANAGPQEDWEMKCKPPSFIYKDLYNATSGFSDKMLLGKGGFGKVYRGFLPASKRNVAIKRISPESKQGMKEFMSEVAILGNVRHRSLVQLLGYCRNKHELLLVYDYMPNGSLDKYLYGRHKLALDIKSSNVLLDEEMNGRLGDFGLARLHDLGVDAYTTHVAGTYGYIAPELARLGKSTKGTDVFAFGVFMMEAARGKRPIEVNSCGEPQALADHVLNAWQRSSIINSIDPSLEDHVAEEVVLVLKLGLLCSHSSPKVRPSMRLVMQYLEREATLQDFAFSFFSINEANNEVYGQHGVSNPSVATTITTLSGGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_05G007760 | OsN22_05G007760_02 | Chr05 | 7484530 | 7489122 | + | IsoSeq | ||
| CDS seq | ATGATGATGATGATTAGACCAGTAGCTGTGATGCTGGCTGTTGATGTAAGTGACATTTGGCCCTAT |
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| Protein seq | MMMMIRPVAVMLAVDVSDIWPY |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.145521 | 0.0 | 0.136221 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0157100 | SBH | 0.0 | 0.542102 | 7.781807 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g13770 | RBH | 0.205210 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0157100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0007970 | RBH | 0.013465 | 0.000000 | 0.262176 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0008000 | RBH | 0.067497 | 0.0 | 0.343878 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0007890 | RBH | 0.000000 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0007950 | RBH | 0.210987 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0004220 | SBH | 4.923542 | 11.666125 | 14.816510 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0116100 | RBH | 0.327409 | 0.2513625 | 0.0873245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0004000 | SBH | 0.408530 | 0.771104 | 1.837079 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0099100 | SBH | 2.2249285 | 4.636801 | 37.394491 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0004130 | SBH | 0.479909 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0004040 | SBH | 1.759267 | 16.248854 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0004150 | SBH | 0.000000 | 25.151007 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0004170 | SBH | 1.550301 | 1.679006 | 1.401672 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0008010 | RBH | 0.046264 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G004060 | RBH | 0.657106 | 4.536473 | 4.317791 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0008030 | RBH | 0.117370 | 0.0 | 0.0 |
