Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_04G027350 | OGI:04094870 | 7/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr04:31611909-31615206 | ||||||||
| Gene Symbol | RLCK166, OsRLCK166 | ||||||||||
| DNA seq | TCTCAGAAGCATGGTGCTCAGGGCATCAACCAAACAGGCCCACAACAGGAGGATAAATTTCCTGGTGTTGCATACCCTGATACCCAGATGTATAAACAAACGGCATTCCAATTCCCAAATACGCTTACAGTTCCACATATTACAAGCAAACCTATATACAAAAATAATAACAGGTTTATTACTAGGTTAACAACAAACAAACAGGGAAAATGAGAGACACCAACTTCAGTAATCCAGGTTGGCAAGTTGAACAAGAGATTCAGAGGCACTGACAAGGAGCTATCTGCCTTGCAATTGAGTATACGTCAACTGATTCCCCGATCCAGTATTGTTATCATCCAGAGGAACCCTTCCGACGAAAAATGCAGCTTGCTTCGGAGCAGGAAGTGTAACATCCCCACTGAGCATCCTGAGCACCAGGGGCATGCTTGGCCTATCACCTGGTAATTCCTGCACGCACAGAAGACCAACCTGGATGCATCTGCATACTTCATCGTAAGAGCATATGGTGCCCATGAGTGGATCGATCAGCTCCGAGACACTGCCTTCCTTCCACAGTGTCCACGCCTGAAATGGGTACAGTGAATTAGAAGATGCCAATCATAAAACGTGTATTGATTACCATATAGTTTGCCATTTAACTGGAAAATGACAAGGGGAAGAAGATAGTATCATCTTACGTAACCCAAGAGATTCATTGACCATTCTTCATCAACAAATGAGCTGTTCCTTCGTCCGCTCACAATCTCTAGGATCAACACGCCGAAACTGAAGATGTCTGATTTCTCAGAGAATTTGCCCTCCATTGCGTACTCTGGAGAGATGTAGCCACTGCATCTCACAGATTTTAGCACATTTAGTTTGCCTTCTAGGACATCTCGTAATGTCAACTAGCAGGTGGATTTTGTTATGATCTAAATAATGTAGTAAAATCATAGAGTTAATGATGCAAGAAGAAAGCAGTAGTTTAGTGAGGCAGGTCAGTACAGTTAAGAGTTGGATCGTAGAATTTTTGTTCAATTTTACTCTAGTGAACAAAAGTGAAAAAGAGCCTTACTAGGTTCCAACAATTCGGTGGGTAAGGGCTTGAAGTTGGTGTTCACCAAATATTCTAGCCATACCAAAGTCAGATATCTTGGGGTTGAAATCATCATCAAGCAGAATATTGCTCGCTTTGAGATCCCTGTGAATAATTTTGAGCCTGGAATCCTGATGAAGGTACAATAATCCTCTCCCAATTCCCTGAATAATCTTGTATCGCAATTTCCATCCAAATATTAGCCTCTTACTTTCATCTAATAAGATTCACATGAAAGCACCAAATTAGCAGACAAGTTCAGTTACTGGCTTACATCTAAACAAAATCAGAACGTCAGGATTTGCAGGAATCAAACTAAACGTTACCAAAAATAAATGAGTCAAGGCTCTTGTTGGGCATGTATTCATACAGCAACATCTTCTCTTCTCCATGAACACAACAACCAAAGAGCCTAACCAAATTCCGGTGTTGCAGTTTGGATAGAACTATCACCTCGTTCTTGAACTCTTCCAATCCCTGACTGGATCTGTTTGACAGCCTCTTGACAGCAATCTCCTGGCCATCAGGTAGTACCCCCTAGAAGTAATATCAACTATGTTGGTTCAGGTATTGATCTTATAGCATTACGATTTTGAATTCCAGGTCAGAACAAAGATAGTAAAAACAACAATTTCATTCATATTAACAAGATAGGATAAAATGATAAAATGTTTAAATGACCATACCTTGTAAACAAAACCAAATCCGCCTCCACCAAGCTTGTTGCTAAAATTATTTGTTGCTGAATAAATCGTGCTAAACTCAACTAGTGGTGAGCTTAGAACTGCGGATTTCACTGAATCACTTCTGAATATAGCTTCATCTGCAGGTGGTCCAGCTTCTTTTGTGATCAGCCGTGGTGCTTGTATTCTCCTCATGCCTGCAGATTAGTAAAAATATTAGATATAAACCTACCAGACAGCTGTTAACGCAAACTGAACTATATCAGCAATCTCTAAGACTAAGAGATAACTGTCATGAAATTATGTTTGGCCGTAGAATATTATGAAGTCTTAGCCTTGTATATTCATAATCTGAACAATGGCATGTATCATACAAATTATTCCTCTAAATCATACAACAGAAAGAAACACTAATGACATCGTAGAAGGAATCCAAATACATGTGAAGAAGTCAGTAATAAAAATATTACCCATTTGCTTTATGACAAATTTCTTCAGGCATCCAAACACACAGAAATGCATGAGCATGATGCCGATAAGGAAGATGGCAGTATCAGCGCTCACTAAGACAATTGAGCATTTATGCTTTGCCTAGAGGAATGCATGTCAACATCGAAATTTCGTGGATTTGCAAGATAATATGTTGTCAATGCTCCGTTCTTATCAAACAGAACAACTGGTCAACAAGATTGGTAGAATGACAAATAAAAACTGATAAATTTATAAGACAATGGAACGTGATGTATTAGACACTGTTATCCTTCGCTTGACCACTTCAACCATTCCATGTTCTTGACAAGTTCAGTATTTGTTGACGAGATCATGAATAAACAATCTTAGGATGTCACTATCTGACCATGCCACCTCCTAGCTTTGCTTAGGAGTTAGGACAGGAGCGAAGAAGGCAATGCATTTTTTTCATAGAGCAATGCTTCTCGTTGGCAAGTGGCAACAAATTAACAGCAGCCGGAGAAATCTCGGGACAGTCTAGCATGGACCAAGTGCTGAAAAAAAAATGAAAATTGAGACGCAGAAATGTACGTCCTTGCAGATTATCAGATTAGTCAACATATGCGGCGAATAACTAAAATTTCTAACTATCTTCCCGATCCCTAACTCACAATCCCTGTAGATTGTCTATACGGGTATAGGTGGGAACAGGATGGAACTGGGATTAAATTTTTGCGGGACCTAACAACCCAGAAATTTCTTCATTCATGCAGGCAGGATGACATTTCGTGCATTCCTATACCAAAAATATCGCTTAAAATCTGAGGTGAATTAAGGGAGGAGTAGTACGTAGTTACTGATTCTGGGTCGCCTTTCCGAGCAAGGGAAACGCAGATCGCCGAGGATAAGATGGGGAGATCTTCACGGTGGAGAGGATCTGGGCGGCCGACCCATCGCGCCTACGGCCGGCGGGTCCCCCCCCCCCCCCTCCATCGCCGGCCAGACCGCCGGCGGCTTCGGCCTCGTCGCCTCCGCCGTCGCCGCGGCACACCACCTCGCCGGCAGCGAATCCCCTCCCCTGGAGGCC
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| CDS seq | ATGCTCATGCATTTCTGTGTGTTTGGATGCCTGAAGAAATTTGTCATAAAGCAAATGGGCATGAGGAGAATACAAGCACCACGGCTGATCACAAAAGAAGCTGGACCACCTGCAGATGAAGCTATATTCAGAAGTGATTCAGTGAAATCCGCAGTTCTAAGCTCACCACTAGTTGAGTTTAGCACGATTTATTCAGCAACAAATAATTTTAGCAACAAGCTTGGTGGAGGCGGATTTGGTTTTGTTTACAAGGGGGTACTACCTGATGGCCAGGAGATTGCTGTCAAGAGGCTGTCAAACAGATCCAGTCAGGGATTGGAAGAGTTCAAGAACGAGGTGATAGTTCTATCCAAACTGCAACACCGGAATTTGGTTAGGCTCTTTGGTTGTTGTGTTCATGGAGAAGAGAAGATGTTGCTGTATGAATACATGCCCAACAAGAGCCTTGACTCATTTATTTTTGATGAAAGTAAGAGGCTAATATTTGGATGGAAATTGCGATACAAGATTATTCAGGGAATTGGGAGAGGATTATTGTACCTTCATCAGGATTCCAGGCTCAAAATTATTCACAGGGATCTCAAAGCGAGCAATATTCTGCTTGATGATGATTTCAACCCCAAGATATCTGACTTTGGTATGGCTAGAATATTTGGTGAACACCAACTTCAAGCCCTTACCCACCGAATTGTTGGAACCTATGGCTACATCTCTCCAGAGTACGCAATGGAGGGCAAATTCTCTGAGAAATCAGACATCTTCAGTTTCGGCGTGTTGATCCTAGAGATTGTGAGCGGACGAAGGAACAGCTCATTTGTTGATGAAGAATGGTCAATGAATCTCTTGGGTTACGCGTGGACACTGTGGAAGGAAGGCAGTGTCTCGGAGCTGATCGATCCACTCATGGGCACCATATGCTCTTACGATGAAGTATGCAGATGCATCCAGGTTGGTCTTCTGTGCGTGCAGGAATTACCAGGTGATAGGCCAAGCATGCCCCTGGTGCTCAGGATGCTCAGTGGGGATGTTACACTTCCTGCTCCGAAGCAAGCTGCATTTTTCGTCGGAAGGGTTCCTCTGGATGATAACAATACTGGATCGGGGAATCAGTTGACGTATACTCAATTGCAAGGCAGATAG
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| Protein seq | MLMHFCVFGCLKKFVIKQMGMRRIQAPRLITKEAGPPADEAIFRSDSVKSAVLSSPLVEFSTIYSATNNFSNKLGGGGFGFVYKGVLPDGQEIAVKRLSNRSSQGLEEFKNEVIVLSKLQHRNLVRLFGCCVHGEEKMLLYEYMPNKSLDSFIFDESKRLIFGWKLRYKIIQGIGRGLLYLHQDSRLKIIHRDLKASNILLDDDFNPKISDFGMARIFGEHQLQALTHRIVGTYGYISPEYAMEGKFSEKSDIFSFGVLILEIVSGRRNSSFVDEEWSMNLLGYAWTLWKEGSVSELIDPLMGTICSYDEVCRCIQVGLLCVQELPGDRPSMPLVLRMLSGDVTLPAPKQAAFFVGRVPLDDNNTGSGNQLTYTQLQGR |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [UniProtKB/Swiss-Prot:Q9SXB8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_04G027350 | OsN22_04G027350_01 | Chr04 | 31611956 | 31615206 | - | NAM | ||
| CDS seq | ATGAGGAGAATACAAGCACCACGGCTGATCACAAAAGAAGCTGGACCACCTGCAGATGAAGCTATATTCAGAAGTGATTCAGTGAAATCCGCAGTTCTAAGCTCACCACTAGTTGAGTTTAGCACGATTTATTCAGCAACAAATAATTTTAGCAACAAGCTTGGTGGAGGCGGATTTGGTTTTGTTTACAAGGGGGTACTACCTGATGGCCAGGAGATTGCTGTCAAGAGGCTGTCAAACAGATCCAGTCAGGGATTGGAAGAGTTCAAGAACGAGGTGATAGTTCTATCCAAACTGCAACACCGGAATTTGGTTAGGCTCTTTGGTTGTTGTGTTCATGGAGAAGAGAAGATGTTGCTGTATGAATACATGCCCAACAAGAGCCTTGACTCATTTATTTTTGATGAAAGTAAGAGGCTAATATTTGGATGGAAATTGCGATACAAGATTATTCAGGGAATTGGGAGAGGATTATTGTACCTTCATCAGGATTCCAGGCTCAAAATTATTCACAGGGATCTCAAAGCGAGCAATATTCTGCTTGATGATGATTTCAACCCCAAGATATCTGACTTTGAGTACGCAATGGAGGGCAAATTCTCTGAGAAATCAGACATCTTCAGTTTCGGCGTGTTGATCCTAGAGATTGTGAGCGGACGAAGGAACAGCTCATTTGTTGATGAAGAATGGTCAATGAATCTCTTGGGTTACGCGTGGACACTGTGGAAGGAAGGCAGTGTCTCGGAGCTGATCGATCCACTCATGGGCACCATATGCTCTTACGATGAAGTATGCAGATGCATCCAGGTTGGTCTTCTGTGCGTGCAGGAATTACCAGGTGATAGGCCAAGCATGCCCCTGGTGCTCAGGATGCTCAGTGGGGATGTTACACTTCCTGCTCCGAAGCAAGCTGCATTTTTCGTCGGAAGGGTTCCTCTGGATGATAACAATACTGGATCGGGGAATCAGTTGACGTATACTCAATTGCAAGGCAGATAG
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| Protein seq | MRRIQAPRLITKEAGPPADEAIFRSDSVKSAVLSSPLVEFSTIYSATNNFSNKLGGGGFGFVYKGVLPDGQEIAVKRLSNRSSQGLEEFKNEVIVLSKLQHRNLVRLFGCCVHGEEKMLLYEYMPNKSLDSFIFDESKRLIFGWKLRYKIIQGIGRGLLYLHQDSRLKIIHRDLKASNILLDDDFNPKISDFEYAMEGKFSEKSDIFSFGVLILEIVSGRRNSSFVDEEWSMNLLGYAWTLWKEGSVSELIDPLMGTICSYDEVCRCIQVGLLCVQELPGDRPSMPLVLRMLSGDVTLPAPKQAAFFVGRVPLDDNNTGSGNQLTYTQLQGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_04G027350 | OsN22_04G027350_02 | Chr04 | 31611909 | 31614299 | - | NAM | ||
| CDS seq | ATGCTCATGCATTTCTGTGTGTTTGGATGCCTGAAGAAATTTGTCATAAAGCAAATGGGCATGAGGAGAATACAAGCACCACGGCTGATCACAAAAGAAGCTGGACCACCTGCAGATGAAGCTATATTCAGAAGTGATTCAGTGAAATCCGCAGTTCTAAGCTCACCACTAGTTGAGTTTAGCACGATTTATTCAGCAACAAATAATTTTAGCAACAAGCTTGGTGGAGGCGGATTTGGTTTTGTTTACAAGGGGGTACTACCTGATGGCCAGGAGATTGCTGTCAAGAGGCTGTCAAACAGATCCAGTCAGGGATTGGAAGAGTTCAAGAACGAGGTGATAGTTCTATCCAAACTGCAACACCGGAATTTGGTTAGGCTCTTTGGTTGTTGTGTTCATGGAGAAGAGAAGATGTTGCTGTATGAATACATGCCCAACAAGAGCCTTGACTCATTTATTTTTGATGAAAGTAAGAGGCTAATATTTGGATGGAAATTGCGATACAAGATTATTCAGGGAATTGGGAGAGGATTATTGTACCTTCATCAGGATTCCAGGCTCAAAATTATTCACAGGGATCTCAAAGCGAGCAATATTCTGCTTGATGATGATTTCAACCCCAAGATATCTGACTTTGGTATGGCTAGAATATTTGGTGAACACCAACTTCAAGCCCTTACCCACCGAATTGTTGGAACCTATGGCTACATCTCTCCAGAGTACGCAATGGAGGGCAAATTCTCTGAGAAATCAGACATCTTCAGTTTCGGCGTGTTGATCCTAGAGATTGTGAGCGGACGAAGGAACAGCTCATTTGTTGATGAAGAATGGTCAATGAATCTCTTGGGTTACGCGTGGACACTGTGGAAGGAAGGCAGTGTCTCGGAGCTGATCGATCCACTCATGGGCACCATATGCTCTTACGATGAAGTATGCAGATGCATCCAGGTTGGTCTTCTGTGCGTGCAGGAATTACCAGGTGATAGGCCAAGCATGCCCCTGGTGCTCAGGATGCTCAGTGGGGATGTTACACTTCCTGCTCCGAAGCAAGCTGCATTTTTCGTCGGAAGGGTTCCTCTGGATGATAACAATACTGGATCGGGGAATCAGTTGACGTATACTCAATTGCAAGGCAGATAG
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| Protein seq | MLMHFCVFGCLKKFVIKQMGMRRIQAPRLITKEAGPPADEAIFRSDSVKSAVLSSPLVEFSTIYSATNNFSNKLGGGGFGFVYKGVLPDGQEIAVKRLSNRSSQGLEEFKNEVIVLSKLQHRNLVRLFGCCVHGEEKMLLYEYMPNKSLDSFIFDESKRLIFGWKLRYKIIQGIGRGLLYLHQDSRLKIIHRDLKASNILLDDDFNPKISDFGMARIFGEHQLQALTHRIVGTYGYISPEYAMEGKFSEKSDIFSFGVLILEIVSGRRNSSFVDEEWSMNLLGYAWTLWKEGSVSELIDPLMGTICSYDEVCRCIQVGLLCVQELPGDRPSMPLVLRMLSGDVTLPAPKQAAFFVGRVPLDDNNTGSGNQLTYTQLQGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| AF | Chr04 | 31613866 | 31615206 | - | OsN22_04G027350_02 | OsN22_04G027350_02,OsN22_04G027350_01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.110930 | 2.176659 | 0.466592 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0634500 | RBH | 0.0 | 1.345000 | 1.359022 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g54190 | RBH | 0.0 | 0.808054 | 0.388598 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0634500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027930 | SBH | 0.268138 | 14.015620 | 3.985055 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028700 | RBH | 0.119786 | 0.000000 | 0.552302 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028310 | SBH | 0.116114 | 20.130335 | 8.453956 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0028130 | RBH | 0.328756 | 0.060884 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028370 | SBH | 0.847923 | 4.364714 | 0.681521 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0493100 | SBH | 3.2457925 | 28.794131 | 4.519752 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0027050 | SBH | 0.044092 | 0.179244 | 1.177269 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0513000 | RBH | 2.2477705 | 24.16646 | 14.9849655 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027470 | SBH | 0.127362 | 0.089022 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027200 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0027360 | SBH | 1.029946 | 41.718189 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027980 | RBH | 0.287816 | 0.386848 | 0.115994 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027950 | SBH | 0.032453 | 2.583230 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G005070 | SBH | 0.000000 | 0.447898 | 0.500868 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0027220 | SBH | 4.608831 | 46.069653 | 1.237956 |
