Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_04g0027220 | OGI:04094860 | 12/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr04:32180082-32189142 | ||||||||
| Gene Symbol | SDK10, RLCK166, OsRLCK166 | ||||||||||
| DNA seq | ttaggtgagatcggttgtggttgagccttggacatcactctgacgaagcggacgcatggcggctctgctgtcaagtgtcggtctcttgggctgctccatctgcgacgtcctgctcgtcagcatggcgacgatttcggacatggtcggcctatcgtccgccatgtcctggatgcagagaagcccgatgtggatgcaccgttctagatcgtacaggagctctgcatcgtcgggtgcaggcctcgccattgccgggtcaaggaggtccatgaggttgccctgttcccacaacctccatgcctgtatgcacaaaagaggtctaactgaaggatccaaatgccattgtcttgcaatgaagatttgatgtgttcagtgcactgcttgattacctgtggaagaagcgtctgcattgagccgttgcgaacgccgctgagcgtctccaggaggaccactccgaagctgtagacgtcgcacttgagcgtcatctcgtctcgtaacgcgtactccggagatgcataacctcttcaattcacgaattcaattcaaggcttcaaatcaaaacttgagcaacattgctactaggaacagccattagtttacttactgtgagaccacgagggtctggcctgactgatcggcgacgaacagcttggcggtgccaaagtctgcaatcttaggcttcaattcgtcgtctagaagaatgttgctcagcttgagatccctgtggattacactcccgtctggtccttcgtgaagatacgcgacacctttcgcgatggcctgaattatgtcgagtcttcttctccagtgcagattagctcgacgcggcaacgggcctgaaatgaagaagaacatggaaggtgacattatttattcatgtcatggtgaatttatgatcaggtcagtgatgtagcttaataagctgaattcagatagaacagggtgggtaccgaaaatgtggttgtccaagctcttgttcttcatgtaggcgtataccagtatacgctcattgccttcgttgcagtaagctaggaggcggagaaggctaccgtgatggagcccggccatcactgccacttctctggcgaaatccttcttgcctttgttcgtcagagctgactgctttagcctcttcacggctaccattctcccgtcagattgtactccctggtcatttccaaatttcaggtgattgcaattgcatttttggcatttgccagtgtacggtattaagtatttgcaacttatgtttaatttcTtttttcatgaggattagtgcaactttcatgttacatgtgtctatcttctgaagagagaggctcaccttataaacggtgctaaatccaccttcaccaatcaagcaattttctgagaaattttcagtaatagactttatagtagctagattgactgaagcaacgcccatagaagggttatctggaataacatctgtggtattagcaatttagcatacagtttgttagcttagaacttcataataaatatccttaagattaaaagcctggatttacctaaaattccgtgattctttttgcaccaaatagcccaaaccccaaaggcgatcaaaagaatagcaatggtagcagctacaggtgggacaactagtacaatcagagaccttttggtctcaactgttactcagacaaaaaaaaaagacatagagagagatcagttcatgctcagaattactcccttcgctgacttttctagttaaaacTtctttagattaaatcaaatttatataaaaaaattAaaagagattgcgacatcaattaggttcattaaatatgatattaaaatattttgataatatgtttatttgtattgaaaataTtgttatatttttctataaactaaattaaacttaaaaaagtttgaataggaaaaagaaaaggtgagagtgacttatattcgagagagtatcatatgtcggcatttcttttacggtgacatcaggatcgttactttgttaaaaaaaaaagaactgttactttgacatttctttcgctaatcttttatctggggtcattttcattcaaaatataggctcggattgaaacccattttcattattgttttagaacataatctttcaagataaaattgaaaataaagcaatgcacataccaaattcagacttagccaatctcaggtacaaatcctgcccgcggtcaacgtagcgaagatcgacgatgtcgtccgtccaaatgacgcagccgccgccgttgatgtcggcggcggcgtaggccacgcacgagcagtttcccaggcacctccgctcgcactccgccgccgtggcgcccatgtccaccgacgcgttgcgcgtgtctggcagcttcaccccccgcaccaccttgaacttgtccgtcgtcctgctcccgccgccgccgccggcgcagtccagcgccacgcctcgccggcacccaccggaggtgttccgcaattcccacgccgacggcgacgcggcggtgaacccatccacgcagccgcagaacgacgtcgccgcggcgtcggcgtcgcacaggccgaacggcccgcaccgcgcgtagctgtcgcaggggtccctcgggccctggaagaatcgctgccatgcccggctgctcgcgtcccacacgaggcgctcgaccacgccggtgtagttcaccacgacgcgcgtcaatggcgcggcgccggccgtggcgaccgatccgtagccgtaggtcacctccctcgcgctggacgtcacctgcagcgggaacttgtcggagtagttggacgcctccgggacgccgttgaagaacctgccgttccacgggcccgtgcggtacaccttggtggcgccgccgccgccgccgcctcgccacaggacgagctccggtaggccgtccgtggccagcgtgcggcggtagtcgcccggcgacgggtcgtcagcggagcgccacgccgtgatgaaccactcctgcccgctccacaggctcttgcccatcttcatgccgggcagcagcgtgtccgacggctggtcgaacgactgccacaggtaggcgtcgccgccgctgccattgcgcacgacgaggttgccggagtcgagaagctgaaccaccgcggcagaggcggccaagaagctcgcggaccacaccgtccggcgagagccgccgtcgagcaggacgagctggctgccatcgtcgttgagcagcagcacgccggacttgccgtcgagggggcggtcacggttggctacccagtagacggtgtcgccggacacggtgaaccatatgccgaggtatctcttggtcgacttcccgggagagaagaaccccagagtgtacgagccgccgccggacgagacgagcgtctggccgtcggtgaggttctggcccttgtcgagcttgtcggcgacgcccgcggcggcggcggccgacgtttggccggagaggaggaagaagaaggcgaccaggcggagtaggttagacgattgcctggTtgacctcatgacaagatcaaaatgtctctagctcttgttgcatgcagaaaggctagctcatgcagcagatggccatgaaggatggtcatgtatactgatcataggcatttctggatacttggattggaatattggatgataaactagttaattcaggtagtccggatctgtctatttagaatttgaaagaggtacatcaaatcccatacgacaatatctaaattctctcaaagtcgtactccaactaattggctgaatttattaatttgcactcaattgggtgtgaaaaaattgcttaaaaagtgcaggtcaatgtgactgcttcgttccaaagatttcttcgtcttagcacgacctgtGgctacacgtaaccatgtagcagagctttacattcttttggcctgaaaaaggaaatggagaagcacaatatgcatcctagttatccaatgggttaacacaaggcaaaagtctcccgtgcacgatgtctcacaaatgactttttacagacactcaaatcctactcaaaatagcaaacagatttgataaccggtcactagggcctgtttggttgctaccctgaacaaaatttacctgacctgagattagcctgactcgttctaggctctgtttggttgctagcctgacactcttttactcaacacggagacgcgtgattagcctgagacaggccaccaaaatcggtggcctgagcctcaggcgcagcgaggacggaagattaccatcataatctgtttcggcagccagcagaacgaagctgccctcccgtgaagctctgatgccgccactgcgtgaagcccttgcctggctgcctccgccgccgtagctatcgccgccgagtgaagtccatgccaccgtcgccgtcgtctacgcgaaagcccctgctgccgtcgccggcgtgcgacaccagatttatcccgtcgtctttcgcggcggctgtcgattcttcggatcccgtcccgtcgtctttcgcggcggctgtcgattcttcggatcccgtcgttgttgcaacttcttggcgcgaagcttcagccaatgctgtgattcttttcgctcctgtcgttgttgccgattgaagcttgccgactgctgcttggatttggggatatttttaatccttgtactcctttggtttcccTttttttatgtatgtgattaattgctattggaaagctacgatttcagttggaactgtcaagcaatctcgccgaaatttgcgtcttctcgtttagcacttgacttactagtgaattatcagacccaaatcactttttcccttctcaggcaacggcggcaaaccaaacaagcaaaagttcaggccgcctggccaggtaacattcaagaacttctcagaagcatggtgctcagggcatcaaccaaacaggcccacaacaggaggataaatttcctggtgttgcataccctgatacccagatgtataaacaaacggcattccaattcccaaatacgcttacagttccacatattacaagcaaacctatatacaaaaataataacaggtttattactaggttaacaacaaacaaacagggaaaatgagagacaccaacttcagtaatccaggttggcaagttgaacaagagattcagaggcactgacaaggagctatctgccttgcaattgagtatacgtcaactgattccccgatccagtattgttatcatccAgaggaacccttccgacgaaaaatgcagcttgcttcggagcaggaagtgtaacatccccactgagcatcctgagcaccaggggcatgcttggcctatcacctggtaattcctgcacgcacagaagaccaacctggatgcatctgcatacttcatcgtaagagcatatggtgcccatgagtggatcgatcagctccgagacactaccttccttccacagtgtccacgcctgaaatgggtacagtgaattagaagatgccaatcataaaacgtgtattgattaccatatagtttgccatttaactggaaaatgacaaggggaagaagatagtatcatcttacgtaacccaagagattcattgaccattcttcatcaacaaatgagctgttccttcgtccgctcacaatctctaggatcaacacgccgaaactgaagatgtctgatttctcagagaatttgccctccattgcgtactctggagagatgtagccactgcatctcacagattttagcacatttagtttgccttctaggacatctcgtaatgtcaactagcaggtggattttgttatgatctaaataatgtagtaaaatcatagagttaatgatgcaagaagaaagcagtagtttagtgaggcaggtcagtacagttaagagttggatcgtagaatttttgttcaattttactctagtgaacaaaagtgaaaaagagccttactaggttccaacaattcggtgggtaagggcttgaagttggtgttcaccaaatattctagccataccaaagtcagatatcttggggttgaaatcatcatcaagcagaatattgctcgctttgagatccctgtgaataattttgagcctggaatcctgatgaaggtacaataatcctctcccaattccctgaataatcttgtatcgcaatttccatccaaatattagcctcttactttcatctaataagattcacatgaaagcaccAaattagcagacaagttcagttactggcttacatctaaacaaaatcagaacgtcaggatttgcaggaatcaaactaaacgttaccaaaaataaatgagtcaaggctcttgttgggcatgtattcatacagcaacatcttctcttctccatgaaCacaacaaccaaagagcctaaccaaattccggtgttgcagtttggatagaactatcacctcgttcttgaactcttccaatccctgacaggatctgtttgacagcctcttgacagcaatctcctggccatcaggtaggaccccctagaagtaatatcaactatgttggttcaggtattgatcttatagcattacgattttgaattccaggtcagaacaaagatagtaaaaacaacaatttcattcatattaacaagataggataaaatgataaaatgtttaaatgaccataccttgtaaacaaaaccaaatccgcctccaccaagcttgttgctaaaattatttgttgctgaataaatcgtgctaaactcaactagttgtgagcttagaactgcggatttcactgaatcacttctgaatatagcttcatctgcaggtggtccagcttcttttgtgatcagccgtgatgcttgtattctccttatgcctgcagattagtaaaaatattagatataaacctaccagacagctgttaacgcaaactgaactatatcagcaatctctaagactaagagataactgtcatgaaattatgtttggccgtagaatattatgaagtcttagccttgtatattcataatctgaacaatggcatgtatcatacaaattattcctctaaatcatacaacagaaagaaacactaatgacatcgtagaaggaatccaaatacatgtgaagaagtcagtaataaaaatattacccatttgctttatgacaaatttcttcaggcatccaaacacacagaaatgcatgagcatgatgccgataaggaagatggcagtatcagcgctcactaagacaattgagcatttatgctttgcctagaggaatgcatgtcaacatcgaaatttcgtggatttgcaagataatatgttgtcaatgctccgttcttatcaaacagaacaactggtcaacaagattggtagaatgacaaataaaaactgataaatttataagacaatggaacgtgatgtattagacactgttatccttcgcttgaccacttcaaccattccatgttcttgacaagttcagtatttgttgacgagatcatgaataaacaatcttaggatgtcactatctgaccatgccacctcctagctttgcttaggagttaggacaggagcgaagaaggcaatgcaTttttttcatagagcaatgcTtttcgttggcaagtggcaacAaattaacagcagccggagaaatctcgggacagtctagcatggaccaagtgctgAaaaaaaaatgaaaattgagacgcggaaatgtacgtccttgcagattatcagattagtcaacatatgcggcgaataactaaaatttctaactatcttcccgatccctaactcacaatccctgtagaTtgtctatacgggtataggtgggaacaggatggaactgggattaaaTttttgcgggacctaacaacccagaaatttcttcattcatgcaggcaggatgacatttcgtgcattcctataccaaaaatatcgcttaaaatctgaggtgaattaagggaggagtagtacgtagttactgattctgggtcgcctttccgagcaagggaaacgcagatcgccgaggataagatggggagatcttcacggtggagaggatctgggcggccgacccatcgcgcctacggccggcgggtcccccaccccccctccatcgccggccagaccgccggcggcttcggcctcgtcgcctccgccgtcgccgcggcacaccacctcgccggcagcgaatCccctcccctggaggccagtccgactaatgggctttgccgttagcggcctataccgtaagcaggccagatctagttgtcacatgcggaaggaataaattcactttaggtccctctatttgtcgttcagtctgatttttgtccctgaactgtaaaaccggatacaacatatcccccaacttataaaaccagcgcacataaggtcctaaggtggtttggatagcggttttggctgaggtggcgtctacgtggctggtttgactaggtctccgtcccacgtgacattgacgtggcacttacgtggtaattatatctcaaaaaataataaaaacagcgggcccacatgtcaactacacAaaaaaaaattaatttagaaatgGTggggcccacggtggcccacatgtcaactacacaacaaaataaatatggtggggcccacgtggaccccgtatgtaggctgtagcaatttctttctcctctctatacccttctCccctaccttcccatatcagccattgccgtcgacgaagaagcttcgcgtgggtggtagagcggggcggagtgaggggcggcggcgcggcggatcctcgcgaccacgtacggcttcgtcttgacggcaccgacgacgcggaaccggtcgccgccgacgtaccccacctcgccggccgccaccccgccccccactccgccgcggcgccgccgccgccggagtacgcgacgccgaacctggagccacgtgtgcaccatggtccggttcctgaactcgaacgcctggagctgcaccgtcgcgccgggaagaccactgacgggaacagcacgatggggatctccgccgcttgctcctgccgcggcgccctcgtccacgcagccgtgcaggttgctgccgcccctgcatgtttcccatcaaacgtgtactagcaactacaaccagcaacaccat
More
|
||||||||||
| CDS seq | atggtgttgctggttgtagttgctagtacacgggcggcagcaacctgcacggctgcgtggacgagggcgccgcggcaggagcaagcggcggagatccccatcgtgctgttcccgtcagtggtcttcccggcgcgacggtgcagctccaggcgttcgagttcaggaaccggaccatggtgcacacgtggctccaggttcggcgtcgcgtactccggcggcggcggcgccgcggcggagtggggggcggggtggcggccggcgaggtggggtacgtcggcggcgaccggcataaggagaatacaagcatcacggctgatcacaaaagaagctggaccacctgcagatgaagctatattcagaagtgattcagtgaaatccgcagttctaagctcacaactagttgagtttagcacgatttattcagcaacaaataattttagcaacaagcttggtggaggcggatttggttttgtttacaagggggtcctacctgatggccaggagattgctgtcaagaggctgtcaaacagatcctgtcagggattggaagagttcaagaacgagggaattgggagaggattattgtaccttcatcaggattccaggctcaaaattattcacagggatctcaaagcgagcaatattctgcttgatgatgatttcaaccccaagatatctgactttggtatggctagaatatttggtgaacaccaacttcaagcccttacccaccgaattgttggaacctatggctacatctctccagagtacgcaatggagggcaaattctctgagaaatcagacatcttcagtttcggcgtgttgatcctagagattgtgagcggacgaaggaacagctcatttgttgatgaagaatggtcaatgaatctcttgggttacgcgtggacactgtggaaggaaggtagtgtctcggagctgatcgatccactcatgggcaccatatgctcttacgatgaagtatgcagatgcatccaggttggtcttctgtgcgtgcaggaattaccaggtgataggccaagcatgcccctggtgctcaggatgctcagtggggatgttacacttcctgctccgaagcaagctgcatttttcgtcggaagggttcctcTggatgataacaatactggatcggggaatcagttgacgcaatcgtctaacctactccgcctggtcgccttcttcttcctcctctccggccaaacgtcggccgccgccgccgcgggcgtcgccgacaagctcgacaagggccagaacctcaccgacggccagacgctcgtctcgtccggcggcggctcgtacactctggggttcttctctcccgggaagtcgaccaagagatacctcggcatatggttcaccgtgtccggcgacaccgtctactgggtagccaaccgtgaccgccccctcgacggcaagtccggcgtgctgctgctcaacgacgatggcagccagctcgtcctgctcgacggcggctctcgccggacggtgtggtccgcgagcttcttggccgcctctgccgcggtggttcagcttctcgactccggcaacctcgtcgtgcgcaatggcagcggcggcgacgcctacctgtggcagtcgttcgaccagccgtcggacacgctgctgcccggcatgaagatgggcaagagcctgtggagcgggcaggagtggttcatcacggcgtggcgctccgctgacgacccgtcgccgggcgactaccgccgcacgctggccacggacggcctaccggagctcgtcctgtggcgaggcggcggcggcggcggcgccaccaaggtgtaccgcacgggcccgtggaacggcaggttcttcaacggcgtcccggaggcgtccaactactccgacaagttcccgctgcaggtgacgtccagcgcgagggaggtgacctacggctacggatcggtcgccacggccggcgccgcgccattgacgcgcgtcgtggtgaactacaccggcgtggtcgagcgcctcgtgtgggacgcgagcagccgggcatggcagcgattcttccagggcccgagggacccctgcgacagctacgcgcggtgcgggccgttcggcctgtgcgacgccgacgccgcggcgacgtcgttctgcggctgcgtggatgggttcaccgccgcgtcgccgtcggcgtgggaattgcggaacacctccggtgggtgccggcgaggcgtggcgctggactgcgccggcggcggcggcgggagcaggacgacggacaagttcaaggtggtgcggggggtgaagctgccagacacgcgcaacgcgtcggtggacatgggcgccacggcggcggagtgcgagcggaggtgcctgggaaactgctcgtgcgtggcctacgccgccgccgacatcaacggcggcggctgcgtcatttggacggacgacatcgtcgatcttcgctacgttgaccgcgggcaggatttgtacctgagattggctaagtctgaatttgatgttattccagataacccttctatgggcgttgcttcagtcaatctagctactataaagtctattactgaaaatttctcagaaaattgcttgattggtgaaggtggatttagcaccgtttataagggagtacaatctgacgggagaatggtagccgtgaagaggctaaagcagtcagctctgacgaacaaaggcaagaaggatttcgccagagaagtggcagtgatggccgggctccatcacggtagccttctccgcctcctagcttactgcaacgaaggcaatgagcgtatactggtatacgcctacatgaagaacaagagcttggacaaccacattttcggcccgttgccgcgtcgagctaatctgcactggagaagaagactcgacataattcaggccatcgcgaaaggtgtcgcgtatcttcacgaaggaccagacgggagtgtaatccacagggatctcaagctgagcaacattcttctagacgacgaattgaagcctaagattgcagactttggcaccgccaagctgttcgtcgccgatcagtcaggccagaccctcgtggtctcacaaggttatgcatctccggagtacgcgttacgagacgagatgacgctcaagtgcgacgtctacagcttcggagtggtcctcctggagacgctcagcggcgttcgcaacggctcaatgcagacgcttcttccacaggcatggaggttgtgggaacagggcaacctcatggacctccttgacccggcaatggcgaggcctgcacccgacgatgcagagctcctgtacgatctagaacggtgcatccacatcgggcttctctgcatccaggacatggcggacgataggccgaccatgtccgaaatcgtcgccatgctgacgagcaggacgtcgcagatggagcagcccaagagaccgacacttgacagcagagccgccatgcgtccgcttcgtcagagtgatgtccaaggctcaaccacaaccgatctcacctaa
More
|
||||||||||
| Protein seq | MVLLVVVASTRAAATCTAAWTRAPRQEQAAEIPIVLFPSVVFPARRCSSRRSSSGTGPWCTRGSRFGVAYSGGGGAAAEWGAGWRPARWGTSAATGIRRIQASRLITKEAGPPADEAIFRSDSVKSAVLSSQLVEFSTIYSATNNFSNKLGGGGFGFVYKGVLPDGQEIAVKRLSNRSCQGLEEFKNEGIGRGLLYLHQDSRLKIIHRDLKASNILLDDDFNPKISDFGMARIFGEHQLQALTHRIVGTYGYISPEYAMEGKFSEKSDIFSFGVLILEIVSGRRNSSFVDEEWSMNLLGYAWTLWKEGSVSELIDPLMGTICSYDEVCRCIQVGLLCVQELPGDRPSMPLVLRMLSGDVTLPAPKQAAFFVGRVPLDDNNTGSGNQLTQSSNLLRLVAFFFLLSGQTSAAAAAGVADKLDKGQNLTDGQTLVSSGGGSYTLGFFSPGKSTKRYLGIWFTVSGDTVYWVANRDRPLDGKSGVLLLNDDGSQLVLLDGGSRRTVWSASFLAASAAVVQLLDSGNLVVRNGSGGDAYLWQSFDQPSDTLLPGMKMGKSLWSGQEWFITAWRSADDPSPGDYRRTLATDGLPELVLWRGGGGGGATKVYRTGPWNGRFFNGVPEASNYSDKFPLQVTSSAREVTYGYGSVATAGAAPLTRVVVNYTGVVERLVWDASSRAWQRFFQGPRDPCDSYARCGPFGLCDADAAATSFCGCVDGFTAASPSAWELRNTSGGCRRGVALDCAGGGGGSRTTDKFKVVRGVKLPDTRNASVDMGATAAECERRCLGNCSCVAYAAADINGGGCVIWTDDIVDLRYVDRGQDLYLRLAKSEFDVIPDNPSMGVASVNLATIKSITENFSENCLIGEGGFSTVYKGVQSDGRMVAVKRLKQSALTNKGKKDFAREVAVMAGLHHGSLLRLLAYCNEGNERILVYAYMKNKSLDNHIFGPLPRRANLHWRRRLDIIQAIAKGVAYLHEGPDGSVIHRDLKLSNILLDDELKPKIADFGTAKLFVADQSGQTLVVSQGYASPEYALRDEMTLKCDVYSFGVVLLETLSGVRNGSMQTLLPQAWRLWEQGNLMDLLDPAMARPAPDDAELLYDLERCIHIGLLCIQDMADDRPTMSEIVAMLTSRTSQMEQPKRPTLDSRAAMRPLRQSDVQGSTTTDLT |
||||||||||
| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [UniProtKB/Swiss-Prot:O81832] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0027220 | OsNaBo_04g0027220.02 | Chr04 | 32180082 | 32188221 | - | NAM | ||
| CDS seq | atgttgctgtatgaatacatgcccaacaagagccttgactcatttatttttgatgaaagtaagaggctaatatttggatggaaattgcgatacaagattattcagggaattgggagaggattattgtaccttcatcaggattccaggctcaaaattattcacagggatctcaaagcgagcaatattctgcttgatgatgatttcaaccccaagatatctgactttggtatggctagaatatttggtgaacaccaacttcaagcccttacccaccgaattgttggaacctatggctacatctctccagagtacgcaatggagggcaaattctctgagaaatcagacatcttcagtttcggcgtgttgatcctagagattgtgagcggacgaaggaacagctcatttgttgatgaagaatggtcaatgaatctcttgggttacgcgtggacactgtggaaggaaggtagtgtctcggagctgatcgatccactcatgggcaccatatgctcttacgatgaagtatgcagatgcatccaggttggtcttctgtgcgtgcaggaattaccaggtgataggccaagcatgcccctggtgctcaggatgctcagtggggatgttacacttcctgctccgaagcaagctgcatttttcgtcggaagggttcctcTggatgataacaatactggatcggggaatcagttgacgcaatcgtctaacctactccgcctggtcgccttcttcttcctcctctccggccaaacgtcggccgccgccgccgcgggcgtcgccgacaagctcgacaagggccagaacctcaccgacggccagacgctcgtctcgtccggcggcggctcgtacactctggggttcttctctcccgggaagtcgaccaagagatacctcggcatatggttcaccgtgtccggcgacaccgtctactgggtagccaaccgtgaccgccccctcgacggcaagtccggcgtgctgctgctcaacgacgatggcagccagctcgtcctgctcgacggcggctctcgccggacggtgtggtccgcgagcttcttggccgcctctgccgcggtggttcagcttctcgactccggcaacctcgtcgtgcgcaatggcagcggcggcgacgcctacctgtggcagtcgttcgaccagccgtcggacacgctgctgcccggcatgaagatgggcaagagcctgtggagcgggcaggagtggttcatcacggcgtggcgctccgctgacgacccgtcgccgggcgactaccgccgcacgctggccacggacggcctaccggagctcgtcctgtggcgaggcggcggcggcggcggcgccaccaaggtgtaccgcacgggcccgtggaacggcaggttcttcaacggcgtcccggaggcgtccaactactccgacaagttcccgctgcaggtgacgtccagcgcgagggaggtgacctacggctacggatcggtcgccacggccggcgccgcgccattgacgcgcgtcgtggtgaactacaccggcgtggtcgagcgcctcgtgtgggacgcgagcagccgggcatggcagcgattcttccagggcccgagggacccctgcgacagctacgcgcggtgcgggccgttcggcctgtgcgacgccgacgccgcggcgacgtcgttctgcggctgcgtggatgggttcaccgccgcgtcgccgtcggcgtgggaattgcggaacacctccggtgggtgccggcgaggcgtggcgctggactgcgccggcggcggcggcgggagcaggacgacggacaagttcaaggtggtgcggggggtgaagctgccagacacgcgcaacgcgtcggtggacatgggcgccacggcggcggagtgcgagcggaggtgcctgggaaactgctcgtgcgtggcctacgccgccgccgacatcaacggcggcggctgcgtcatttggacggacgacatcgtcgatcttcgctacgttgaccgcgggcaggatttgtacctgagattggctaagtctgaatttgatgttattccagataacccttctatgggcgttgcttcagtcaatctagctactataaagtctattactgaaaatttctcagaaaattgcttgattggtgaaggtggatttagcaccgtttataagggagtacaatctgacgggagaatggtagccgtgaagaggctaaagcagtcagctctgacgaacaaaggcaagaaggatttcgccagagaagtggcagtgatggccgggctccatcacggtagccttctccgcctcctagcttactgcaacgaaggcaatgagcgtatactggtatacgcctacatgaagaacaagagcttggacaaccacattttcggcccgttgccgcgtcgagctaatctgcactggagaagaagactcgacataattcaggccatcgcgaaaggtgtcgcgtatcttcacgaaggaccagacgggagtgtaatccacagggatctcaagctgagcaacattcttctagacgacgaattgaagcctaagattgcagactttggcaccgccaagctgttcgtcgccgatcagtcaggccagaccctcgtggtctcacaaggttatgcatctccggagtacgcgttacgagacgagatgacgctcaagtgcgacgtctacagcttcggagtggtcctcctggagacgctcagcggcgttcgcaacggctcaatgcagacgcttcttccacaggcatggaggttgtgggaacagggcaacctcatggacctccttgacccggcaatggcgaggcctgcacccgacgatgcagagctcctgtacgatctagaacggtgcatccacatcgggcttctctgcatccaggacatggcggacgataggccgaccatgtccgaaatcgtcgccatgctgacgagcaggacgtcgcagatggagcagcccaagagaccgacacttgacagcagagccgccatgcgtccgcttcgtcagagtgatgtccaaggctcaaccacaaccgatctcacctaa
More
|
|||||||
| Protein seq | MLLYEYMPNKSLDSFIFDESKRLIFGWKLRYKIIQGIGRGLLYLHQDSRLKIIHRDLKASNILLDDDFNPKISDFGMARIFGEHQLQALTHRIVGTYGYISPEYAMEGKFSEKSDIFSFGVLILEIVSGRRNSSFVDEEWSMNLLGYAWTLWKEGSVSELIDPLMGTICSYDEVCRCIQVGLLCVQELPGDRPSMPLVLRMLSGDVTLPAPKQAAFFVGRVPLDDNNTGSGNQLTQSSNLLRLVAFFFLLSGQTSAAAAAGVADKLDKGQNLTDGQTLVSSGGGSYTLGFFSPGKSTKRYLGIWFTVSGDTVYWVANRDRPLDGKSGVLLLNDDGSQLVLLDGGSRRTVWSASFLAASAAVVQLLDSGNLVVRNGSGGDAYLWQSFDQPSDTLLPGMKMGKSLWSGQEWFITAWRSADDPSPGDYRRTLATDGLPELVLWRGGGGGGATKVYRTGPWNGRFFNGVPEASNYSDKFPLQVTSSAREVTYGYGSVATAGAAPLTRVVVNYTGVVERLVWDASSRAWQRFFQGPRDPCDSYARCGPFGLCDADAAATSFCGCVDGFTAASPSAWELRNTSGGCRRGVALDCAGGGGGSRTTDKFKVVRGVKLPDTRNASVDMGATAAECERRCLGNCSCVAYAAADINGGGCVIWTDDIVDLRYVDRGQDLYLRLAKSEFDVIPDNPSMGVASVNLATIKSITENFSENCLIGEGGFSTVYKGVQSDGRMVAVKRLKQSALTNKGKKDFAREVAVMAGLHHGSLLRLLAYCNEGNERILVYAYMKNKSLDNHIFGPLPRRANLHWRRRLDIIQAIAKGVAYLHEGPDGSVIHRDLKLSNILLDDELKPKIADFGTAKLFVADQSGQTLVVSQGYASPEYALRDEMTLKCDVYSFGVVLLETLSGVRNGSMQTLLPQAWRLWEQGNLMDLLDPAMARPAPDDAELLYDLERCIHIGLLCIQDMADDRPTMSEIVAMLTSRTSQMEQPKRPTLDSRAAMRPLRQSDVQGSTTTDLT
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0027220 | OsNaBo_04g0027220.01 | Chr04 | 32180082 | 32189142 | - | NAM | ||
| CDS seq | atggtgttgctggttgtagttgctagtacacgggcggcagcaacctgcacggctgcgtggacgagggcgccgcggcaggagcaagcggcggagatccccatcgtgctgttcccgtcagtggtcttcccggcgcgacggtgcagctccaggcgttcgagttcaggaaccggaccatggtgcacacgtggctccaggttcggcgtcgcgtactccggcggcggcggcgccgcggcggagtggggggcggggtggcggccggcgaggtggggtacgtcggcggcgaccggcataaggagaatacaagcatcacggctgatcacaaaagaagctggaccacctgcagatgaagctatattcagaagtgattcagtgaaatccgcagttctaagctcacaactagttgagtttagcacgatttattcagcaacaaataattttagcaacaagcttggtggaggcggatttggttttgtttacaagggggtcctacctgatggccaggagattgctgtcaagaggctgtcaaacagatcctgtcagggattggaagagttcaagaacgagggaattgggagaggattattgtaccttcatcaggattccaggctcaaaattattcacagggatctcaaagcgagcaatattctgcttgatgatgatttcaaccccaagatatctgactttggtatggctagaatatttggtgaacaccaacttcaagcccttacccaccgaattgttggaacctatggctacatctctccagagtacgcaatggagggcaaattctctgagaaatcagacatcttcagtttcggcgtgttgatcctagagattgtgagcggacgaaggaacagctcatttgttgatgaagaatggtcaatgaatctcttgggttacgcgtggacactgtggaaggaaggtagtgtctcggagctgatcgatccactcatgggcaccatatgctcttacgatgaagtatgcagatgcatccaggttggtcttctgtgcgtgcaggaattaccaggtgataggccaagcatgcccctggtgctcaggatgctcagtggggatgttacacttcctgctccgaagcaagctgcatttttcgtcggaagggttcctcTggatgataacaatactggatcggggaatcagttgacgcaatcgtctaacctactccgcctggtcgccttcttcttcctcctctccggccaaacgtcggccgccgccgccgcgggcgtcgccgacaagctcgacaagggccagaacctcaccgacggccagacgctcgtctcgtccggcggcggctcgtacactctggggttcttctctcccgggaagtcgaccaagagatacctcggcatatggttcaccgtgtccggcgacaccgtctactgggtagccaaccgtgaccgccccctcgacggcaagtccggcgtgctgctgctcaacgacgatggcagccagctcgtcctgctcgacggcggctctcgccggacggtgtggtccgcgagcttcttggccgcctctgccgcggtggttcagcttctcgactccggcaacctcgtcgtgcgcaatggcagcggcggcgacgcctacctgtggcagtcgttcgaccagccgtcggacacgctgctgcccggcatgaagatgggcaagagcctgtggagcgggcaggagtggttcatcacggcgtggcgctccgctgacgacccgtcgccgggcgactaccgccgcacgctggccacggacggcctaccggagctcgtcctgtggcgaggcggcggcggcggcggcgccaccaaggtgtaccgcacgggcccgtggaacggcaggttcttcaacggcgtcccggaggcgtccaactactccgacaagttcccgctgcaggtgacgtccagcgcgagggaggtgacctacggctacggatcggtcgccacggccggcgccgcgccattgacgcgcgtcgtggtgaactacaccggcgtggtcgagcgcctcgtgtgggacgcgagcagccgggcatggcagcgattcttccagggcccgagggacccctgcgacagctacgcgcggtgcgggccgttcggcctgtgcgacgccgacgccgcggcgacgtcgttctgcggctgcgtggatgggttcaccgccgcgtcgccgtcggcgtgggaattgcggaacacctccggtgggtgccggcgaggcgtggcgctggactgcgccggcggcggcggcgggagcaggacgacggacaagttcaaggtggtgcggggggtgaagctgccagacacgcgcaacgcgtcggtggacatgggcgccacggcggcggagtgcgagcggaggtgcctgggaaactgctcgtgcgtggcctacgccgccgccgacatcaacggcggcggctgcgtcatttggacggacgacatcgtcgatcttcgctacgttgaccgcgggcaggatttgtacctgagattggctaagtctgaatttgatgttattccagataacccttctatgggcgttgcttcagtcaatctagctactataaagtctattactgaaaatttctcagaaaattgcttgattggtgaaggtggatttagcaccgtttataagggagtacaatctgacgggagaatggtagccgtgaagaggctaaagcagtcagctctgacgaacaaaggcaagaaggatttcgccagagaagtggcagtgatggccgggctccatcacggtagccttctccgcctcctagcttactgcaacgaaggcaatgagcgtatactggtatacgcctacatgaagaacaagagcttggacaaccacattttcggcccgttgccgcgtcgagctaatctgcactggagaagaagactcgacataattcaggccatcgcgaaaggtgtcgcgtatcttcacgaaggaccagacgggagtgtaatccacagggatctcaagctgagcaacattcttctagacgacgaattgaagcctaagattgcagactttggcaccgccaagctgttcgtcgccgatcagtcaggccagaccctcgtggtctcacaaggttatgcatctccggagtacgcgttacgagacgagatgacgctcaagtgcgacgtctacagcttcggagtggtcctcctggagacgctcagcggcgttcgcaacggctcaatgcagacgcttcttccacaggcatggaggttgtgggaacagggcaacctcatggacctccttgacccggcaatggcgaggcctgcacccgacgatgcagagctcctgtacgatctagaacggtgcatccacatcgggcttctctgcatccaggacatggcggacgataggccgaccatgtccgaaatcgtcgccatgctgacgagcaggacgtcgcagatggagcagcccaagagaccgacacttgacagcagagccgccatgcgtccgcttcgtcagagtgatgtccaaggctcaaccacaaccgatctcacctaa
More
|
|||||||
| Protein seq | MVLLVVVASTRAAATCTAAWTRAPRQEQAAEIPIVLFPSVVFPARRCSSRRSSSGTGPWCTRGSRFGVAYSGGGGAAAEWGAGWRPARWGTSAATGIRRIQASRLITKEAGPPADEAIFRSDSVKSAVLSSQLVEFSTIYSATNNFSNKLGGGGFGFVYKGVLPDGQEIAVKRLSNRSCQGLEEFKNEGIGRGLLYLHQDSRLKIIHRDLKASNILLDDDFNPKISDFGMARIFGEHQLQALTHRIVGTYGYISPEYAMEGKFSEKSDIFSFGVLILEIVSGRRNSSFVDEEWSMNLLGYAWTLWKEGSVSELIDPLMGTICSYDEVCRCIQVGLLCVQELPGDRPSMPLVLRMLSGDVTLPAPKQAAFFVGRVPLDDNNTGSGNQLTQSSNLLRLVAFFFLLSGQTSAAAAAGVADKLDKGQNLTDGQTLVSSGGGSYTLGFFSPGKSTKRYLGIWFTVSGDTVYWVANRDRPLDGKSGVLLLNDDGSQLVLLDGGSRRTVWSASFLAASAAVVQLLDSGNLVVRNGSGGDAYLWQSFDQPSDTLLPGMKMGKSLWSGQEWFITAWRSADDPSPGDYRRTLATDGLPELVLWRGGGGGGATKVYRTGPWNGRFFNGVPEASNYSDKFPLQVTSSAREVTYGYGSVATAGAAPLTRVVVNYTGVVERLVWDASSRAWQRFFQGPRDPCDSYARCGPFGLCDADAAATSFCGCVDGFTAASPSAWELRNTSGGCRRGVALDCAGGGGGSRTTDKFKVVRGVKLPDTRNASVDMGATAAECERRCLGNCSCVAYAAADINGGGCVIWTDDIVDLRYVDRGQDLYLRLAKSEFDVIPDNPSMGVASVNLATIKSITENFSENCLIGEGGFSTVYKGVQSDGRMVAVKRLKQSALTNKGKKDFAREVAVMAGLHHGSLLRLLAYCNEGNERILVYAYMKNKSLDNHIFGPLPRRANLHWRRRLDIIQAIAKGVAYLHEGPDGSVIHRDLKLSNILLDDELKPKIADFGTAKLFVADQSGQTLVVSQGYASPEYALRDEMTLKCDVYSFGVVLLETLSGVRNGSMQTLLPQAWRLWEQGNLMDLLDPAMARPAPDDAELLYDLERCIHIGLLCIQDMADDRPTMSEIVAMLTSRTSQMEQPKRPTLDSRAAMRPLRQSDVQGSTTTDLT
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0027220 | OsNaBo_04g0027220.03 | Chr04 | 32185016 | 32185251 | - | IsoSeq | ||
| CDS seq | tggatcggggaatcagttgacgtatactcaattgcaaggcagatagctccttgtcagtgc |
|||||||
| Protein seq | WIGESVDVYSIARQIAPCQC |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.608831 | 46.069653 | 1.237956 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0634500 | RBH | 0.0 | 1.345000 | 1.359022 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g54180 | RBH | 0.0 | 0.068311 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0634500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027930 | RBH | 0.268138 | 14.015620 | 3.985055 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028700 | RBH | 0.119786 | 0.000000 | 0.552302 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028310 | RBH | 0.116114 | 20.130335 | 8.453956 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0028130 | RBH | 0.328756 | 0.060884 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028370 | RBH | 0.847923 | 4.364714 | 0.681521 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0508800 | RBH | 0.1884645 | 5.106274 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0027050 | RBH | 0.044092 | 0.179244 | 1.177269 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0512900 | RBH | 0.0069965 | 1.8567085 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027470 | RBH | 0.127362 | 0.089022 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027300 | RBH | 0.030103 | 42.622898 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0027360 | RBH | 1.029946 | 41.718189 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027980 | RBH | 0.287816 | 0.386848 | 0.115994 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027950 | RBH | 0.032453 | 2.583230 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G027340 | RBH | 0.515051 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0005040 | SBH | 0.000000 | 1.020672 | 6.215721 |
