Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_03G026130 | OGI:03068170 | 15/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr03:26108539-26115106 | ||||||||
| Gene Symbol | TPR90, OsTPR090, TPR090, OsTPR90 | ||||||||||
| DNA seq | CATTTCAAAACCCCAAACCCCCCAAGCTCCTCCTCCTCTCCCCCCTCTCCCTGCCCTCCTAAACCCTACCCCATTTTCCTCTCCTCCATCGATCGATCGATCGCTCGCTCGCTCGCCCATCGCCATGGCGGAGGAGCTCCCCTTCCCCGCTAACATCGAAGGTAAGCGCCCCCAGCCCCCCCCTTCCACTAACCCTAGCCCCACCAAGAGAGCTGACTGACCACTCTCTCTCCCTTCCCTTTTCCGCAGTGATGCGCCACACGCCGCGGTTCAAGCTCATGCAGGCGGCGTTCCACGGCGACCTCCGCGGCTTGAAGCGTACGCCCTCTCGCGCTCGCGCTCTCCCTCTCCTCCGGTTCCGGGCTCGGATCGGATGGATTCTGCTGGACTGCGGCGACCTGCTGTTTTGCCGCAACGCTTGCTGAATTTTTTTTCCTCTCTGTTTTTCTTTTTTTTTTTCTGGTTTGGTGGTGGTATGTGATTCGTTTGCAGGGCAGGCGAAGATTCTGGATATGGGGAGGGGCCGCCTGAGGAAGGCCGTAGAGGATGTGAGGGTGGAAGGCGTGCCGGGCGAGGAAGGTACAGGGGTGCTGCATATGGCTGCCTCCCATGGCCACATGGAGATGTGCAAGTACCTGGTCGAAACGCTTCAGGTGGATGTGGATGATGCGGATGACAAAGGTCCATACTTTTTTCACAAAACCGAGCCCGAGTTTGTAGAGCTAGGACTTTGGAGTCCGGTATTTGCTCATACTACCGCAGTAGGGACATGCTAGTTTTTGAAACTTCGTAAAATGCTATTTCTAACTTTGTAATAAAGTCATAATGAAGCTATTATCTTGGTTTTCATGCATAGGTTAGGACACTGTTTATGTTTAGCCAAGTTGCTTGGTATATAGATTTGAAATATGACTTAGTGCTGCTTAATTGATTGTGCTCCCTAGGGTTGTGCATGGCATTTTGGAACAACACTTTGAAGGAATTAATATTTATTCCACAAAGTTGAATAAGAAAGCAATAGAACATTGCACTAGATTTGCCTGATTGCCCCCATTTGTCATATTCTGTTGTGCGTAGTTATGTAATGTTTCACGCAAAATTAGGCCATGCGCACTTCTATTAACCATTCTCTCTTGTTATAGCCTACGGAAGTGGGTGGTTCATACAAATGTATCTCGGCATCAGTAAATTATTGGTTACTTTAGGTAACATGATATTTGATGTTTGCACTTAATAAAATATGCTCCTCATCTATGGTCATGCACTCTGTAATTCTACTTCATACAAAACCTAAAATCCCGTCTATATTTTATTCCCTTGAGGAGCAATTGCATTTGGCTGTATGTTTTGACATAGATAAATATTTTGTTAGAAAAACATCATTTTCTGCTTTTTATTTTTCAGAAAATTTTAAAATAGACTCTCTTGTCAGCTGTTTTTTTAACAAAAGGTTTTGGCCAAATGCCCAAACCCATAAGGGTGGTTTGGCAAGGCAATCCACACCAGGTAAATACTGTTGCATGGAAAAAAATGCTGCCGTGCCTCATAGCAGCGTGGCCAACAGTTTGTTTAAAGTAATTTACTGTAGATTTATTTTTAAAACTTTATTAGAAAAGGCTAAAAAATAAAGAGAATGTTTCTAACTTTCTATACTGAACCCTGATAGTTCTTTGCATCAATAAGCTTCATTATCTATTTTCTTGACAGGTAGAACATCTCTACTTAAGGCGGTACATTCTGGGCATCGGGGAATTGCCAAGTATCTTCTTAATCATGACGCCAATCCAGACCTAGCCATGTGCTGTGGGCTTACCCCTCTACATTCTGCCGCTGGATTAGGTCTCCTACTATAAACATGTATCTCTGTTTTCAATCAACGCATTGCTGTTTTTATTAAGTTGTGTATTTTGGATGGCTATGCTCATACACCTTTTAGTCTTTTAAGGCTTTGTTTTTCTGGTACTGGATTTATGTGCATATGCGCTTATATGGGTGTGAATGTTCATAGGTGTACAAAACACAGAAATGGGTGCAGGGTGCATATTCACATATAATTTTAATTCCCCCTTTGGCCTTCCTAATGTTTATGGCTCCACTATGTATAGGAGTAATCTTATTATAACCACAGGCTTTTGCCAACTTACTCCCTCCGTCCCAAATTAGTTGTCTCTTTAGGATTCAAATATTGTCCCAAAATAGTTGTCACAATGGAGTAATACTTGTCCCATCAATCACTTCTAATTCAAATTTTTTTCTTTTCTACCCTCAACTATCCTCCCACATCCAACCATACATCATTTAATAAAGGGCACTATAGTCTTTTTTGTCAAACCTTAATCCATGCTAAACAACCTAGAATGACAGCTAATATGGGACAGAGGTAGTACAAAATATTCCACCTTGCGTTTTTTTAATTTTCAGCAGCTATTGGTCCTATGCAGAATTACAGATATTGTATAAGAGATGGGCAGCAGGCCAGTGCCCTGGTGTCTAGTGCCTAGTTGTGGACTAGGAGCTTGGTGGGAAGCTGCTTTTAGAGTTGTGATCCTGCCATGTTGTTAACTTAATGATCTTAGTTTTATGGACTACCATCCTTTTTTACTTCAAATTTTAAAGCAGATGTTCAGGACAAATCAAGTTCCAACATTTTTTGGAAAGAAAGATGTTGTCAGAACTAACCAATATCCTCCTTTGTACTACCTGATTTGTTTTGTACCTGATCTGGACTAATAAGTACTTGATTTGTTTTATTCAGGTGATTGTGAGTCCGTAAAACTATTGCTTGCAAAAGGAGCTTATGTTGACCCAATGTCTACTTTTGGGACACCACTTCATCTTGCTGCTAAAGAAGGGCAGGATGGCACCATGAAGATATTGTTGGACAACAATGCAGATGTAAGTTCAGCTACATGAAATTTCTACCATAGCCCTTAAATTGCCCTGGTTTCATTTGTTTGCTTATTAAGGATCATTATAGTCCTAACTGCCCTGTTGTCATCTTCCATCTTATTTATTGTTGTAATATTGTCTGATCGTTTGGTGCTGTTATGGAAAAATAAATTGAGTGTGAGCTTTGCTAGCTAATCTTTTGTCACATAGGTAACCTAGAACTCTTCAATACCATGTTGCCGTTGTTTGATAAAATGACTCGGTAACAAGTATTGAAACTTCGAAAGTATTTCATCAACTCATGTTCAAACTCCTAATACTGCATTTTTAAGTAGATATCTGTATTATGGTCATATTTTTGTTTTGGGGTCTTAAGCCTGCCCTTTAGGCCCTTCATATACAACCCCTTGTTACCGAGGATACATACAAAGCTACTTGAAAAATTTGAACAGGCCCTCTTTGCACAAGATAAATGTTCAATTGTTTGAATGGAAACATCATTTTAAGGGCCTAATATGCTTAATGTTTCTAATCAGTGCAACAAGATGGTAAATGGTATAACACCTCTCCTCCTTGCTATGAAAGCTGCATCAGCAAAATGTATGGAGCTGCTGGTTGAGGTATTGATGCTTAATATTAGCCACATCAAATTCTAAGATTATCTTTGGACTGCCTGCTTTGTTTTGACATTTTCCACACTCAAGTGAGGACAATTTGACTTTCTTTTGTTGGCATTTTGGTTGCGAACATGAACTACATTTGTGTCCCAATACACATTCTTAGCCACATAAAACACTCAGTGTGGAAACTTTCTTAACCATGTTTTTTTGAAACCTACCACCATTGATTTTTCTGCCACATGTATGATGACAGAGGTAGTGACATTAAGTCGTTCGTTTCATATCTGAAGCAAATTGCTACATATTACCCAAGACAATCTTGCAGCCAGATATGTAACAACTTTTTGCATCATAGGCTGGAGCTGATGCTACTTACTCTGATGTCATCTGGAATTATATGTCAACTACTTTTATGGATGATGAAGATAGTGGTTCATCTGTGTTCTCGGATTCTGAACCAGAAGAGATTGATGCCAATCACCATATTCCCGTCAATGTAAGACCTCTTTGCTACAAAGGGCATGCATTTAGAAGTTCGAAATTTGTACATAGTAGAATCCTAGTAAACAATGTAGCTCTAAAACTTTTGAGGCAGGTATCTGGTTAGTTGATTTATTTACCTTGTTTCCTATTCATATTTCCTCCATCGTAGTTCTGTTAGCATCTAATTATTGTGTGTACGCATGAACTCAGTGCTTCTCTATATAATCCAGAACAACCTTTGAGCAATGGCACCTCATGTTGCATTGCCTCGCCTTACGCCTCGCACGCTATGGCGCTGAGACAGGGATATGCCACCTTAGACCACCAATAAAACTGCTTGGGTGCAATCATGGTGCAACCTATCTAAAAATTTTCAGGGAAAAAAAATCCAAACTTTCTAGACATGTTTATGGTATAATTTTTTGGGCTCAAATTGATTGTAGTCATAGCAACAAAAAAGTAAAATTATGAAAAGTGTTTAGAGTTAAATGTTTCATCATTGCCCTTTGTTGTTACTCTTTAACATTGTTCAAATTTGGAATCTATATTTATACATGGTAATAAAGCATGAAGTAAACCTACAAACCTTTTCTGGCTTATTATTTCTCATAATTTTTAGTTGGAGCTATGCCCAAGTATTATTGCATAGCATATATTCCCATATTTCCTAGGGAATAACACATCAATTTGTCCATATTGGTATTAACAAAACTTTAGCAGTGCTATTGTGATCATGGGGAAATTATCCTATGATTATATAGAAAGTAGGAGATGGAGTGGGGTGTATGTCTCTTGGGCTCTTGACTGGTAAGATTATTTTAATGTAGAATGTGCTATGGCGATAAGGATAGCTACCCTAAAGGTGATATTAACAGGTTTTGATAGTTTAGTAGCTAGAATTTATTGATAATGCAGATGGATACTTGTAGAATATCATGAGTGCTTGAAACATCACGTTTGAGCAATCAAATGTATCTTTCCTGGAATATTCACAATAGTTGCTTTACAGTTAGTATATCTTTCCCATGTGTTCTGCAAGGTTTTCGTTTATTTGATATTTTTTATGATTCACTTTATCAGGACAAACCTGTGAATCGAAGGAAAATTGCAGAGTTTAAGTCGTTAGGGCTTGAGGCAGTTGAGAAAAAGGATTATCTTTCTGCAGCAGGATTCTACAGTGAGGTATAATAGAGCACAATTATTTCCTGTGTTTCTCTTTTCCAAAATATATGCTGTAGTGGTTTGTGTAAGCTTTCTACATGAGGCAGGGAAGCTTCTCAATGATTTCATAACGAGTACATTTTCATGAATGCAAACACCATAATCTGAAGTATTCTCTGAGATGGCTTTTAGTTGTATCTAAGATTTAAACACGTTAAATCAACTTCTGACAAGATCCAAACTTTTGATCGGTTGCTTTCCTTTTTTCTTCCTTAATTTTGTTTTTTTACAGACAGGCAACTTTTTTTTTTCGCACCAATGCCCTTTCTGGTTGGATGTAGGCCATGGACCTTGACCCTGATGATGCAACCCTGCTGTCCAATAGGAGCCTTTGCTGGCTTTATCTGGGTGAAGGAGGCAAGGCTTTGGTGGATGCTCATGAATGCAGAAAAATGCGGCCTGACTGGCCGAAGGCCTGCTACCGTCAGGGTGCAGCTTTAATGTTACTGAAGGTTAGATAGAAGATTATTACCCTTTTTGTGTTTGTGCTGCAGATGGTTTTCAATGTTAGCTTGATTTTTTTTTTGGCAGGACTATGTGAGCGCGTGTGAAGCACTTTTTGATGGATTCAAGTTGGATCCTGAGGACGTTGAGATTGAAAATGCATTACGGTAATCCTATGTCCCTTTGGTCATGCTAGATCTTATGATGATAAATTGAATGGTTTCATATGCTGTAGCTAGATTCAAGATTGACTCACACCCTATCCTTAAAAACTTGTGAAATACTCCCTCCATTCGCTTTTGATCAGCACACAAGAAAAACAGAAGAATTCAACAATGATCAGCACATAACCGTGTTAATTTGCATGCTCCGTGTTAATATCATTACTAGGAGAATAATAAAAACAGAAGAATTCGACAATGATCAGCGCATAATATCAATGAGAGGTTTATTAACAAAGGATATATGTGGCATTCTGTGGTGATGTGTTTCTGCACGTTGGCATCTAAACACTTGCTAATTACAACACCATGTAATCTTGATGGTTCTCCAAACATGTCGCTGCTTCATTATTTTGTTCTGATGATAGTAGTTCTTGATATATGCAGGGAAGCTCTAGAGTTCTTGAAGGTGTCTCAAAGCACTTCGGCTAACTGAACTGTATGGGTTTTGCAGCGGATGTTCTGGTTCATGTTTTACCTTTCCACAAGGCTCTTTTGGCATTGAATCCCTGAACTGGTTCCCTTTCGTAAGTTGAATGGCGAGTCGGTGACTATCGCAGAAGTTTCATTGTGCTAACTCGAACTGACGGTGAGACATCTGAGAGTACTTTTTGCTGCATCTGTGTGATGCCCCATTATAATGTCTATGTAAACATACCGAACTACTGTTACGTCATTTTATTGATCACT
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| CDS seq | ATGGCGGAGGAGCTCCCCTTCCCCGCTAACATCGAAGTGATGCGCCACACGCCGCGGTTCAAGCTCATGCAGGCGGCGTTCCACGGCGACCTCCGCGGCTTGAAGCGGCAGGCGAAGATTCTGGATATGGGGAGGGGCCGCCTGAGGAAGGCCGTAGAGGATGTGAGGGTGGAAGGCGTGCCGGGCGAGGAAGGTACAGGGGTGCTGCATATGGCTGCCTCCCATGGCCACATGGAGATGTGCAAGTACCTGGTCGAAACGCTTCAGGTGGATGTGGATGATGCGGATGACAAAGGTAGAACATCTCTACTTAAGGCGGTACATTCTGGGCATCGGGGAATTGCCAAGTATCTTCTTAATCATGACGCCAATCCAGACCTAGCCATGTGCTGTGGGCTTACCCCTCTACATTCTGCCGCTGGATTAGGTGATTGTGAGTCCGTAAAACTATTGCTTGCAAAAGGAGCTTATGTTGACCCAATGTCTACTTTTGGGACACCACTTCATCTTGCTGCTAAAGAAGGGCAGGATGGCACCATGAAGATATTGTTGGACAACAATGCAGATTGCAACAAGATGGTAAATGGTATAACACCTCTCCTCCTTGCTATGAAAGCTGCATCAGCAAAATGTATGGAGCTGCTGGTTGAGGCTGGAGCTGATGCTACTTACTCTGATGTCATCTGGAATTATATGTCAACTACTTTTATGGATGATGAAGATAGTGGTTCATCTGTGTTCTCGGATTCTGAACCAGAAGAGATTGATGCCAATCACCATATTCCCGTCAATGACAAACCTGTGAATCGAAGGAAAATTGCAGAGTTTAAGTCGTTAGGGCTTGAGGCAGTTGAGAAAAAGGATTATCTTTCTGCAGCAGGATTCTACAGTGAGGCCATGGACCTTGACCCTGATGATGCAACCCTGCTGTCCAATAGGAGCCTTTGCTGGCTTTATCTGGGTGAAGGAGGCAAGGCTTTGGTGGATGCTCATGAATGCAGAAAAATGCGGCCTGACTGGCCGAAGGCCTGCTACCGTCAGGGTGCAGCTTTAATGTTACTGAAGGACTATGTGAGCGCGTGTGAAGCACTTTTTGATGGATTCAAGTTGGATCCTGAGGACGTTGAGATTGAAAATGCATTACGGGAAGCTCTAGAGTTCTTGAAGGTGTCTCAAAGCACTTCGGCTAACTGA
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| Protein seq | MAEELPFPANIEVMRHTPRFKLMQAAFHGDLRGLKRQAKILDMGRGRLRKAVEDVRVEGVPGEEGTGVLHMAASHGHMEMCKYLVETLQVDVDDADDKGRTSLLKAVHSGHRGIAKYLLNHDANPDLAMCCGLTPLHSAAGLGDCESVKLLLAKGAYVDPMSTFGTPLHLAAKEGQDGTMKILLDNNADCNKMVNGITPLLLAMKAASAKCMELLVEAGADATYSDVIWNYMSTTFMDDEDSGSSVFSDSEPEEIDANHHIPVNDKPVNRRKIAEFKSLGLEAVEKKDYLSAAGFYSEAMDLDPDDATLLSNRSLCWLYLGEGGKALVDAHECRKMRPDWPKACYRQGAALMLLKDYVSACEALFDGFKLDPEDVEIENALREALEFLKVSQSTSAN |
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| Function | Ankyrin-1 [UniProtKB/Swiss-Prot:P16157] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_03G026130 | OsN22_03G026130_01 | Chr03 | 26108539 | 26115106 | + | NAM | ||
| CDS seq | ATGGCGGAGGAGCTCCCCTTCCCCGCTAACATCGAAGTGATGCGCCACACGCCGCGGTTCAAGCTCATGCAGGCGGCGTTCCACGGCGACCTCCGCGGCTTGAAGCGGCAGGCGAAGATTCTGGATATGGGGAGGGGCCGCCTGAGGAAGGCCGTAGAGGATGTGAGGGTGGAAGGCGTGCCGGGCGAGGAAGGTACAGGGGTGCTGCATATGGCTGCCTCCCATGGCCACATGGAGATGTGCAAGTACCTGGTCGAAACGCTTCAGGTGGATGTGGATGATGCGGATGACAAAGGTAGAACATCTCTACTTAAGGCGGTACATTCTGGGCATCGGGGAATTGCCAAGTATCTTCTTAATCATGACGCCAATCCAGACCTAGCCATGTGCTGTGGGCTTACCCCTCTACATTCTGCCGCTGGATTAGGTGATTGTGAGTCCGTAAAACTATTGCTTGCAAAAGGAGCTTATGTTGACCCAATGTCTACTTTTGGGACACCACTTCATCTTGCTGCTAAAGAAGGGCAGGATGGCACCATGAAGATATTGTTGGACAACAATGCAGATTGCAACAAGATGGTAAATGGTATAACACCTCTCCTCCTTGCTATGAAAGCTGCATCAGCAAAATGTATGGAGCTGCTGGTTGAGGCTGGAGCTGATGCTACTTACTCTGATGTCATCTGGAATTATATGTCAACTACTTTTATGGATGATGAAGATAGTGGTTCATCTGTGTTCTCGGATTCTGAACCAGAAGAGATTGATGCCAATCACCATATTCCCGTCAATGACAAACCTGTGAATCGAAGGAAAATTGCAGAGTTTAAGTCGTTAGGGCTTGAGGCAGTTGAGAAAAAGGATTATCTTTCTGCAGCAGGATTCTACAGTGAGGCCATGGACCTTGACCCTGATGATGCAACCCTGCTGTCCAATAGGAGCCTTTGCTGGCTTTATCTGGGTGAAGGAGGCAAGGCTTTGGTGGATGCTCATGAATGCAGAAAAATGCGGCCTGACTGGCCGAAGGCCTGCTACCGTCAGGGTGCAGCTTTAATGTTACTGAAGGACTATGTGAGCGCGTGTGAAGCACTTTTTGATGGATTCAAGTTGGATCCTGAGGACGTTGAGATTGAAAATGCATTACGGGAAGCTCTAGAGTTCTTGAAGGTGTCTCAAAGCACTTCGGCTAACTGA
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| Protein seq | MAEELPFPANIEVMRHTPRFKLMQAAFHGDLRGLKRQAKILDMGRGRLRKAVEDVRVEGVPGEEGTGVLHMAASHGHMEMCKYLVETLQVDVDDADDKGRTSLLKAVHSGHRGIAKYLLNHDANPDLAMCCGLTPLHSAAGLGDCESVKLLLAKGAYVDPMSTFGTPLHLAAKEGQDGTMKILLDNNADCNKMVNGITPLLLAMKAASAKCMELLVEAGADATYSDVIWNYMSTTFMDDEDSGSSVFSDSEPEEIDANHHIPVNDKPVNRRKIAEFKSLGLEAVEKKDYLSAAGFYSEAMDLDPDDATLLSNRSLCWLYLGEGGKALVDAHECRKMRPDWPKACYRQGAALMLLKDYVSACEALFDGFKLDPEDVEIENALREALEFLKVSQSTSAN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.483815 | 0.0 | 2.491657 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0621400 | RBH | 0.0 | 0.0 | 0.984089 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g42350 | RBH | 0.0 | 0.0 | 0.253324 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0621400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0026660 | RBH | 0.264590 | 0.0 | 1.999411 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0026390 | RBH | 0.000000 | 0.0 | 0.298981 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0026450 | RBH | 0.0 | 0.0 | 0.368856 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0026480 | SBH | 0.066784 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0026270 | RBH | 0.0 | 2.149392 | 2.067425 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0415900 | RBH | 0.6618315 | 1.0365865 | 9.5188445 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0026050 | RBH | 0.000000 | 0.101696 | 0.503630 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0419600 | RBH | 1.3502555 | 1.8966665 | 19.5331405 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0026310 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0026330 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0026430 | RBH | 0.851464 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0026180 | RBH | 0.000000 | 0.150316 | 0.364655 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0026090 | RBH | 0.075010 | 0.861089 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G026010 | SBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0026080 | RBH | 1.148217 | 2.000087 | 7.727885 |
