Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsN22_03G020880 | OGI:03044990 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr03:17655652-17660609 | ||||||||
Gene Symbol | RLCK110, OsRLCK110, PTK5, OsPTK5 | ||||||||||
DNA seq | CGGAGCAGTAAAAACTGAGTACAAAGAGGCCAAGACCAATAAATTTCAAACCAAGAGAAAAGAAACAAGGAATTACAGGGGGTGCAATCCTTCCTGGCCAGTGACCACCGGCTGCACCACCATCTACATTTTACATCCTCATCATCAGTCACTACACAAAAACATTACATTGCGGGTTACGGATATATATATATTACACTTGATATTTAGGATTTTACTTCTCCAGGCATATGCCACACCCAAAACTCCTCGCTTTGGCCTGGACGTCTCCTAACGACCTTCTGGGGTGAACGCATTTTACTTTGCCTAAGTTTTCCACCATCCCTCTCACCGGGCCTTCTCCTTGCTGTTCTTTCCTTTCTCACAGCATTATCCTCCTTTACCGGGGCTATGGGTGCCACCGACTCATCAGAGACATCATCGGTGACATTGAGGAGGGGCTCTAGGTCTTTCACGACTTGACACATGTCCGGTCTATTTTTGGGGTTACCGCTCAGGCACCGATACGCCACCAGGGCTGCCTTATGAGCCGCGGTAGCGGAGTACTGGCCCTCCAGGGCCGGGTCCATGACTCGGCTTAACTTTTGTGGATCCTTGAGCCAGGAGCGCATGTGTTCGACTAGATGCTGCTCCCTGCTAGGTCGTGTCTTGTCCACGGCCCGTCGCCCGGATAGGATCTCTAGCAGAACGACACCAAAGCTGTATACGTCGCTCTTTGCTGTAAGGTGACCTGGCAAATGATAACACGATGCATTTGGTTAGAACATTTGTAAAAAGGATACTAGTACATTATAGGTTTGCAAGAGGAGAAAAAGAATCGATGGTGTTGAAAAGATATGTATACATAGTATAGGTGTGTGTATAGTGCATATACGTACCGGTGAGGATGTACTCCGGTGCGGCGTAGCCGTGGGTGCCCATGACGCGTGTGGAGACGTGGGTGTCGTCGCCCTCCGGCCCATCTTTGGCCAGCCCAAAGTCCGACAGCTTCGCCTTGTACTCCTGCACGACGCCACTTCAATTAGCCTTTTTCGATCTACTAGGCCGAATTAATCACTACTGGGCCTCCTACTCGGCCCACGTTAGACGATCTCCAAATATCAGTTGGGCTTTAGCCCAGTCATGAACTACTGCGTGCATTCGCGCGTTCAGACTCGCGAGGACAATCAGTCGCTGTATCACCTACTTTGTACTGTACTACTAGTAACCTGAGCACTTAATTTCCAACCTCTGACTAATGCACCATAAATTCGATTCGTGTGAACGAGTAAAGCATCAGGTCAACTCCATAAATAAATCACGTTATGCTACGAAAAGTAATTAGGTTGATCAATATCTCTAGAAGAATTTAAGTGTAATGAAATAATAATAATAATTAATAACAAGTGTAATTACCGGGTCGAGTAGGATGTTGGAGGTCTTGAAGTCGCGGTAGATGACGGGCTTCTCGGCGTCGTGAAGGAAGACGAGGCCCTTGGCGGCGCCAACCGCGATGTTCAACCGGGTTGACCACGACAGCATCGAAGGAAACTCTGAAAATAAAAAGAAAAAGAAAAGTAAATATAATTATTACATAATTCAATAATAATCCTGGTCAAGAGTAATTAATTCGTTAAATATAAGCATCACTAGAAGTATTTGCTTACTTCACTTTACATTACTTTGCGTGTGTGAGGCACAGCTAAATGCATGGCTAGTTGCATATGACCAAACCCAAAAAAAAAGAGAGAAAATAGCAGCTGCTGAATCGTATACCAGTTAGGTGGTGGACCAGTCAAGGTTTTGTGCACAAGTTGCATGCTTTGATTTGTTAATTTGGTCCGGCCAAACAAACCTTTTCTTAATTAATGGTTTTTCTGGATGATTCATACTAAATCAGTAGATCGAGTTTGGATGGAAAATTCATCAGGCACTGCGAATGTAAAAGCCTACTTTTTCAACAACTACTACCAATTATTAGGTCTTATTCCAACTAGCTTAATTAGCTGCTTTGCACTTAATTAGCTTTCTCTCGATCGATCGTCATCAAATCCGCCCAGCGTCCACAGGAATTAGACCTAAAAACATGTACTTCGTGCATATAAATACATATATTCCCTTTCTGGAATTGAGTAGCTAACGAACGAATTAACCTGAGAATATATGGCATGATCAATGTGAAACGGAGCCAATGGAGTCAATATGCTCATCTAAGATGAGACTGTCCACAACCACCTCATCTAGCTAGTTTCCTTTAATTCTTCTTCCACATCTAGCTAGACTTTTCGTTTTGAATTTTATTCCAACTAAATGCTTAATCAGTCAGAGTAGAAAATTACTTTCTTGGAGGGAGATATAACGGCATATATCTAGTCAGATTAAGATCAGATCAGGAAGGAGGAGAGGGTCAGCAATGTCAAAAACAAGCAGCGATTGATGCGGCCGCAATGTGTATAGCATAATCGATCAAATCAAACGTAGTCGACTAATCAATTATCAACTAGCTACAGCTGCTGACCACTGGCCAGTATGTATACCATCTATCCAGCTTACTAGCTGTCAGTGAAGATGATATATTGCGCGTGCTCCATGCTGGAGTGGCATGTACGTATGGCATATATAGCTAATTATCTGCTCCACTAGTGCGGTCATTAGGGACCTAATTTCTCCATATGAACAGGACTTACACAGTACTATACATAAATTGCGGCGTGTGTGTGAAACTTTGGAGCTTAATAAGATGTGTAAGCGACAAAGAATAATATATACATTAACCTAATTATTGAGTAGTGCTCCCTCTAATCTACTTGTACCACTGGTAGAGAAACCATCTTTGATCGATCCACCAGATTTCACAATAGCCCCGGTTATATTAAAAACCTCTTTAGTCCCGATTTGAAAGCTCTAAGGAATTTTTTGATCTTTAGTCTCGGTTGGTGTTACCAACTGGGACTAAAGATCTATTTATAGTCCCGGTTGGTGTTACCAACCGGGAAAAAAGATCAATATAAACTTTACTCTCGGTTGTGTTTAGTCCCGGTTGGTAACACCAACCGGGAAAAAAGTCGACATAAGCGGGGTGGTTGCACGCGGATCGGATCAATACATTCTCCTCCTCTCCTTTTTTAACTCATCTCCTCACAGAGTCACCCTTATCTTTTTCTCTCCCTCCTCCCTTCCTCTCCTCCTCTCCCTCCTCCTCACCTCCCTCCGCAACGGCAGGGCGCAGAGGCCCGGCCGGCCCGTGCGGCGGCGCGGCGCGCGGAGGGCCGGCCGGCCGACGTGCGGCGGCGCTACGCGCGGAGGGCCGGGCGAGGCGGCGCGCTAGCGGCTGGCGGCCTCGCGGCGGCGGCCTGGGACGCGGCGGGCGGCGCGCGGGCGGCTGGCGGCGGAGCCGGGGACGCGGCGGGTGGCGCGGCGGCGGGCGGCGAGGCGGCGCGGCAGCGGGCCGTTCATCTTCTTCCTTTTTTTCTTTCTTTTTTTTTAAAATCTGTGATTCGGATCTAAGACGATTTGTGTGTGATGTGAATATGTAATGTATTTGTGATGTAATTTTTTTAAGATTTTGTTATGTATTTAGAGATTGATTTGAGAATTTGGAGACTATTCGGGGATGATTGATTTGGGATTTTGGGATGGGATAGAGTGAATCAATATATTAAAAATAATGAAGAAAAGAATAGAATAAAGTAGCAACCTGAGCTAGCCTCTTTAGTACCGGTTGATGTTACCAACCGAGACTAAAGATACTCTATCTTTAGTCCCGATTGGTAATACCAACCGGGACTAAAAATAGATTTTTACTCCTGGTTTTTCACCCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTTATAGTCCCGGTTGGAAAACCGGGACTACAGGGGTTATGAACAGGGAGTAAAGCCCCTTTCTCCACCAGTGTACCATAACTAATTAGCAGAAGTTATATAATTAATTAAGAAATGGAGGGTGAATAATTGTACATACTCTTGAAGAGGTGGTTCTCGAGGCTGCCCTTGGCCATGTACTCGTAGACGAGCAGGCGGTGCTCGTCCTCGCAGCAGTAGCCGATGAGCTTCACCAGGTTGGGGTGCCTGAGCTGCCCAAGGAAGATCACCTCCGACTGCATGCATCACAAAAATGTTACTAATTATTTGCATGGCTAATAAAGTTGTTACTCCTAATTGATTGATTAATTAGAAGCAATTAAGTATAGTAAGTAAATTAAATTACCAGCCATTCTTTGTGACCCTGGGCGCCCTCGGGGTCCCAGAGCTTGACGGCGATGGGCTGGGCCTTGAGGCCCGGCTTGGCCTTGTCGGCGACGTTGCCCTTGTAGACGGGGCCGAAGCCGCCCTCGCCGAGGAAGTTGCCGTCGAGGAACCCCTGCGTCGCCGCCTTCAGCTCCCCCACCGTGAACACGTGCAGGTTCGACCCCACCAGCGACACCGACAGCTCCTGCTCCGACGCCGTGCTCATCACGTCCGTGAACGACAGCCGCTGCGCCGCCGCCGATGATGCTCCTCCGCCGTGCTTCGCCGCCGCCGCCGCCGCCGTCCTCGGCCCCGGCCGCACCTTCCGGCTCCCCGCCGCGCCTCCTCCGCTCAGGCATCCCCTGAACAGGCTCCCCCACCCTGACCTCTCCTTCTTCCTCGTCATCCTGCTGCTAGCTGCTGATGGTGATCTCTCTCCGTCCTGTGACCAACGACGAGGAGAGATGAATCGATCGATCCCTGAATCCTTATCGTGTTCTTGCGATCGATCGAGTGGTGAGGTGGAGTCAGTGTTGGGAGAGAGAGAGGGGTATATATACATGTGGGGGAAGCGAGGGGGCGCGTGTGTGGAGAGATGACCGCGTGTGCCTCGGCTTACCTACCAATCGATAGTAAGGACATGGACATCTTCTTCTTCTTCCTCCTCCTCCTACTACTACTCGACTCTTCCGTCCGTGACGTCTCCTCTCTTCTCGCCCGCGT
More
|
||||||||||
CDS seq | ATGTATATATACCCCTCTCTCTCTCCCAACACTGACTCCACCTCACCACTCGATCGATCGCAAGAACACGATAAGGATTCAGGGATCGATCGATTCATCTCTCCTCGTCGTTGGTCACAGGACGGAGAGAGATCACCATCAGCAGCTAGCAGCAGGATGACGAGGAAGAAGGAGAGGTCAGGGTGGGGGAGCCTGTTCAGGGGATGCCTGAGCGGAGGAGGCGCGGCGGGGAGCCGGAAGGTGCGGCCGGGGCCGAGGACGGCGGCGGCGGCGGCGGCGAAGCACGGCGGAGGAGCATCATCGGCGGCGGCGCAGCGGCTGTCGTTCACGGACGTGATGAGCACGGCGTCGGAGCAGGAGCTGTCGGTGTCGCTGGTGGGGTCGAACCTGCACGTGTTCACGGTGGGGGAGCTGAAGGCGGCGACGCAGGGGTTCCTCGACGGCAACTTCCTCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCAACGTCGCCGACAAGGCCAAGCCGGGCCTCAAGGCCCAGCCCATCGCCGTCAAGCTCTGGGACCCCGAGGGCGCCCAGGGTCACAAAGAATGGCTGTCGGAGGTGATCTTCCTTGGGCAGCTCAGGCACCCCAACCTGGTGAAGCTCATCGGCTACTGCTGCGAGGACGAGCACCGCCTGCTCGTCTACGAGTACATGGCCAAGGGCAGCCTCGAGAACCACCTCTTCAAGAAGTTTCCTTCGATGCTGTCGTGGTCAACCCGGTTGAACATCGCGGTTGGCGCCGCCAAGGGCCTCGTCTTCCTTCACGACGCCGAGAAGCCCGTCATCTACCGCGACTTCAAGACCTCCAACATCCTACTCGACCCGGAGTACAAGGCGAAGCTGTCGGACTTTGGGCTGGCCAAAGATGGGCCGGAGGGCGACGACACCCACGTCTCCACACGCGTCATGGGCACCCACGGCTACGCCGCACCGGAGTACATCCTCACCGGTCACCTTACAGCAAAGAGCGACGTATACAGCTTTGGTGTCGTTCTGCTAGAGATCCTATCCGGGCGACGGGCCGTGGACAAGACACGACCTAGCAGGGAGCAGCATCTAGTCGAACACATGCGCTCCTGGCTCAAGGATCCACAAAAGTTAAGCCGAGTCATGGACCCGGCCCTGGAGGGCCAGTACTCCGCTACCGCGGCTCATAAGGCAGCCCTGGTGGCGTATCGGTGCCTGAGCGGTAACCCCAAAAATAGACCGGACATGTGTCAAGTCGTGAAAGACCTAGAGCCCCTCCTCAATGTCACCGATGATGTCTCTGATGAGTCGGTGGCACCCATAGCCCCGGTAAAGGAGGATAATGCTGTGAGAAAGGAAAGAACAGCAAGGAGAAGGCCCGGTGAGAGGGATGGTGGAAAACTTAGGCAAAGTAAAATGCGTTCACCCCAGAAGGTCGTTAGGAGACGTCCAGGCCAAAGCGAGGAGTTTTGGGTGTGGCATATGCCTGGAGAAGTAAAATCCTAA
More
|
||||||||||
Protein seq | MYIYPSLSPNTDSTSPLDRSQEHDKDSGIDRFISPRRWSQDGERSPSAASSRMTRKKERSGWGSLFRGCLSGGGAAGSRKVRPGPRTAAAAAAKHGGGASSAAAQRLSFTDVMSTASEQELSVSLVGSNLHVFTVGELKAATQGFLDGNFLGEGGFGPVYKGNVADKAKPGLKAQPIAVKLWDPEGAQGHKEWLSEVIFLGQLRHPNLVKLIGYCCEDEHRLLVYEYMAKGSLENHLFKKFPSMLSWSTRLNIAVGAAKGLVFLHDAEKPVIYRDFKTSNILLDPEYKAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYILTGHLTAKSDVYSFGVVLLEILSGRRAVDKTRPSREQHLVEHMRSWLKDPQKLSRVMDPALEGQYSATAAHKAALVAYRCLSGNPKNRPDMCQVVKDLEPLLNVTDDVSDESVAPIAPVKEDNAVRKERTARRRPGERDGGKLRQSKMRSPQKVVRRRPGQSEEFWVWHMPGEVKS |
||||||||||
Function | Serine/threonine-protein kinase RIPK [UniProtKB/Swiss-Prot:Q9ZUF4] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_03G020880 | OsN22_03G020880_01 | Chr03 | 17655668 | 17660609 | - | NAM | ||
CDS seq | ATGTATATATACCCCTCTCTCTCTCCCAACACTGACTCCACCTCACCACTCGATCGATCGCAAGAACACGATAAGGATTCAGGGATCGATCGATTCATCTCTCCTCGTCGTTGGTCACAGGACGGAGAGAGATCACCATCAGCAGCTAGCAGCAGGATGACGAGGAAGAAGGAGAGGTCAGGGTGGGGGAGCCTGTTCAGGGGATGCCTGAGCGGAGGAGGCGCGGCGGGGAGCCGGAAGGTGCGGCCGGGGCCGAGGACGGCGGCGGCGGCGGCGGCGAAGCACGGCGGAGGAGCATCATCGGCGGCGGCGCAGCGGCTGTCGTTCACGGACGTGATGAGCACGGCGTCGGAGCAGGAGCTGTCGGTGTCGCTGGTGGGGTCGAACCTGCACGTGTTCACGGTGGGGGAGCTGAAGGCGGCGACGCAGGGGTTCCTCGACGGCAACTTCCTCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCAACGTCGCCGACAAGGCCAAGCCGGGCCTCAAGGCCCAGCCCATCGCCGTCAAGCTCTGGGACCCCGAGGGCGCCCAGGGTCACAAAGAATGGCTGTCGGAGGTGATCTTCCTTGGGCAGCTCAGGCACCCCAACCTGGTGAAGCTCATCGGCTACTGCTGCGAGGACGAGCACCGCCTGCTCGTCTACGAGTACATGGCCAAGGGCAGCCTCGAGAACCACCTCTTCAAGAAGTTTCCTTCGATGCTGTCGTGGTCAACCCGGTTGAACATCGCGGTTGGCGCCGCCAAGGGCCTCGTCTTCCTTCACGACGCCGAGAAGCCCGTCATCTACCGCGACTTCAAGACCTCCAACATCCTACTCGACCCGGAGTACAAGGCGAAGCTGTCGGACTTTGGGCTGGCCAAAGATGGGCCGGAGGGCGACGACACCCACGTCTCCACACGCGTCATGGGCACCCACGGCTACGCCGCACCGGAGTACATCCTCACCGGTCACCTTACAGCAAAGAGCGACGTATACAGCTTTGGTGTCGTTCTGCTAGAGATCCTATCCGGGCGACGGGCCGTGGACAAGACACGACCTAGCAGGGAGCAGCATCTAGTCGAACACATGCGCTCCTGGCTCAAGGATCCACAAAAGTTAAGCCGAGTCATGGACCCGGCCCTGGAGGGCCAGTACTCCGCTACCGCGGCTCATAAGGCAGCCCTGGTGGCGTATCGGTGCCTGAGCGGTAACCCCAAAAATAGACCGGACATGTGTCAAGTCGTGAAAGACCTAGAGCCCCTCCTCAATGTCACCGATGATGTCTCTGATGAGTCGGTGGCACCCATAGCCCCGGTAAAGGAGGATAATGCTGTGAGAAAGGAAAGAACAGCAAGGAGAAGGCCCGGTGAGAGGGATGGTGGAAAACTTAGGCAAAGTAAAATGCGTTCACCCCAGAAGGTCGTTAGGAGACGTCCAGGCCAAAGCGAGGAGTTTTGGGTGTGGCATATGCCTGGAGAAGTAAAATCCTAA
More
|
|||||||
Protein seq | MYIYPSLSPNTDSTSPLDRSQEHDKDSGIDRFISPRRWSQDGERSPSAASSRMTRKKERSGWGSLFRGCLSGGGAAGSRKVRPGPRTAAAAAAKHGGGASSAAAQRLSFTDVMSTASEQELSVSLVGSNLHVFTVGELKAATQGFLDGNFLGEGGFGPVYKGNVADKAKPGLKAQPIAVKLWDPEGAQGHKEWLSEVIFLGQLRHPNLVKLIGYCCEDEHRLLVYEYMAKGSLENHLFKKFPSMLSWSTRLNIAVGAAKGLVFLHDAEKPVIYRDFKTSNILLDPEYKAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYILTGHLTAKSDVYSFGVVLLEILSGRRAVDKTRPSREQHLVEHMRSWLKDPQKLSRVMDPALEGQYSATAAHKAALVAYRCLSGNPKNRPDMCQVVKDLEPLLNVTDDVSDESVAPIAPVKEDNAVRKERTARRRPGERDGGKLRQSKMRSPQKVVRRRPGQSEEFWVWHMPGEVKS
More
|
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsN22_03G020880 | OsN22_03G020880_02 | Chr03 | 17655652 | 17655818 | - | IsoSeq | ||
CDS seq | ATGGTGGTGCAGCCGGTGGTCACTGGCCAGGAAGGATTGCACCCC |
|||||||
Protein seq | MVVQPVVTGQEGLHP |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 6.930495 | 0.191393 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0407900 | RBH | 0.131331 | 0.134683 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g29410 | RBH | 0.087867 | 0.089621 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os03g0407900 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0021370 | RBH | 0.101918 | 12.502356 | 0.000000 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0021190 | RBH | 0.103379 | 0.0 | 0.000000 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0021250 | RBH | 0.0 | 3.588186 | 0.888007 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0021250 | RBH | 0.0 | 0.115606 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0021080 | RBH | 0.000000 | 8.100677 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0276700 | RBH | 0.669144 | 43.379124 | 0.017972 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0020820 | RBH | 0.000000 | 0.343832 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0279500 | RBH | 0.534383 | 154.0470275 | 0.1193515 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0021070 | RBH | 0.0 | 0.195438 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0021110 | RBH | 0.0 | 28.967556 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0021180 | RBH | 0.0 | 2.827883 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0021040 | RBH | 0.0 | 0.647103 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0020920 | RBH | 0.063647 | 2.242591 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G022760 | RBH | 0.753096 | 0.477673 | 0.477058 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0020760 | RBH | 0.256061 | 45.044781 | 0.0 |