Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_01G025890 OGI:01078850 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr01:25303618-25309801
Gene Symbol OsFbox029, OsFbox29, Os_F0384
DNA seq

CTACAGATCAACATTTGGAGATGGCATCTTCCAGTAATTCCAGGAATTGTAGTCTTCCTGCATGGCGTCATCATTGATGATCAGCAGTTCAGCACAAAAAGAAATTTACATGTTATGGAGTCCGACCATCCATGAGTACAACACAATCACACTAGCTGCCCTTTGCTCCCAGCAGTAACCTGTATGGCTCAGGCAGCATAGAACTGGAGTTGACTATGCACTAAGGATAAAAATAGTTTGTCCAGGATAGTATGAAAGAACCAAAGAAAAAGAAAACATGAATGTGCATGTTTTTCGGTCTAGCTAATCTCATGAAAAGTTTGCACACATAACATATATATATTCTCTGTGGCCTTTTATCCATGTGCAGAAAACACGGTTACTTAACTTGGTAACCTTTCTGTAACTATGCAGTATGCATCCACATCAGATCAACTGACATCAATTTTGCAAGAAAAAATATTGGTGCCTGGGATTCTGGACAGCAAGTTCACACACATAGCTAGTAAATACTTCATCCCAAAATAAGTGCCCCTTTTAGATTGTTTGGTAGAGATTAAGGTTTAAGAACAAAACAATATAGTGCCCATTATTAAATGATGTGCGTTTGGCAGTGGGAGGGTGATTAGAGGTAAGATGGGAAGAAATTTTGAATTCGAAAGGGGCACTTATTTTGGGACGACGTTGATCGTCGGCCATAGTAATTGCTACGGCAGAGAAGACCTTTCATGCATTACTTAAAAAGTACGTACTGCAAGAAGGGAAGAATGACAAGCTAACCTGCACAACAAGAGTGTTTGGAGGGAACATATCATGGATAAGGGTATGTAAGGAGGTATAGGAGTTCAACAGAACTGTTTATGGCTACTCCCCCCCTTCACGCACACAGGATGACTATAAAAAGGCAATACAAGCATGGGATCACTAACTTTTTAACTGGTGTAATAGACATACCTTCGGGTTGATGATAAAGATTTTCCCTTTTGGAATTCCCATCTTTTTGTAACTAAGCTTATCTGTATCTCTGTTGACAAATCCAGAATAAAATGGATTGTAATCAGAAGGGAGGAGTGCATGCCCTGCCGAAGAACAAAAATTAAAGAATTTCAAGAACCTGCTGTGATACCAACATGGAGTTTCAGGTCTCTCGAAGAATCTAAATAATGTGTGTTTCTAAGATTGTCATGTACCCGTTAGAAAGGAATTTCGAGACAATAACAACTTTTCTTAATTCTTGCAAGTCTTATAGTGATTTCTGAAGGATATGAGTTATGATGCCATACAAGAATTAAAAATGGAGAAGCTAATAAGCAAACTTCTTAACCATAGGAGGGATGGTATGCGGATGAGGGATAATTTATTAGGGACTTGTTCGGTTTAAGTTCACTAAGGAATTGAAACCAAAAGGCACATACAAACAAGACCTCATAGTTCTTATTCTAACAAATAAAATTAGCTTGTTTTACTGGCACATAATATTTCATAGTATCATAGCACATTGAGTATTAAACCCGATCCTCATAAGACAACTGCCTAAAGAGAATTACCTCCATACATGCAATCTTAAACTCATGTGGTGCTCTTCGTATAACTGAGAAGAACAAAGGAAACATTACAACATGCTAAACAACAATTTTATTACAGTACACAAAAGTAACAGTATTGTTGATCACTGTTAGCTACTTTTCTTTGTCGAAGCTGAGCCTGAATTATACAGACCATCCTAGTAGTTCAGTGAAACCAGATTGCTAATCATTATTCAACAAGTCATAATAGAAGAAATGATAACAATCCGACCCAGGTGGGGTTGGCCGAGGCTCAATAACTTAAGGTTGCCAATTATACAGACCATCCTAGTAGTTCAGTGAAACCAGATTGCTAATCATTATTCAGCAAGTCATAATAGAAGAAATGATAACAATCCGGCCCAGGTGGGGTTGGCCGATGCTCAATAACTTAAGGTTGCCCGGACCCCAACAGTTCTTTGGCACACCCACTCAGGGAAAGACCCAATCTCCCTAAAAGACTAGTCCAATAGGAGAAGGGTGGCTCTTCCTTTTAAGATGGCTTCCTCCTCTCAAGCTAAGCAAGCAATAGGAGAAGACACGGTCGCCGCCTGACTTTGGCGTCTTTGCCAGCAGGTAATAGTGGAGGATATCCTCATCATTCCCACCCCCTTAACAACCCTCCTCTCAAGCTAAGCAAGCAATAGGAGAAGACACGGTCGCCGCCTGACTTTGGCGTCTTTGCCAGCAGGTAATAGTGGAGGATATCCTCATCATTCCCACCCCCTTAACAACGGCACAGCTCTGATACCAAATGATAACAATCCGGCCCAGGTGGGGTTGGCCGATGCCCAATAACTTACCAGCGGGTAATAGTGGAGGATGTCCTCATCATTCCCACTCCCTTAACAGGGGCCCACCCCCTTAACAACGGCACAGCTCTGATACCAAATGATAACAATCCGGCCCAGGTGGGGTTGGCCGATGCCCAATAACTTACCAGCGGGTAATAGTGGAGGATGTCCTCATCATTCCCACTCCCTTAACAGGGGCCCAGCTCTGATACCAAATGATAACAATCCGGCCCAGGTGGGGTTGGCCGAGGCCCAATAACTTAAGGTTGTCCGGACCCCAACAGTTCTTTGGCACACCCACTTAGGGAAAGGCCCAATCTCCCTAAAAGACTAGTCCAATAGGGGAAGGGTGGCTCTTCCTTTTAAAATGGCTTCCTCCTCCCAAGCTAAGCAAGGTGGGATTATTCAGAGGCTCACACGGTCGCCGCCCGACTTTGGCGTCTTTGCCAGCGGGTAATAGTGGAGGATGTCGTCATCAAGAATATGCAAATATTGGAGAGATGATGCTACCTTCCTGGTACAATGAAGGAAATAAACATCAGGTGAAATCACAACAGGTCCATTAGGCAATACCTTCCCATCCTGCAAAGTTGCCAAGGGATAACCAAGTTTATGTACATACCAACATAGAATTAAAATTACTATTATAGTTCTGGTGAAGATATGATTAGATCACTAATGGTAGGAAAAAAAATCAAATGGACAAATGCTATATTTTACCAACATAGGATTTGACCATCAAATGGACAAATGCTACATTTTGCCTGTTTTAGGTTGAATAGAAAGTTTTTAGTCAGGTATGCCTGAATTATAGCACTGAGGAATAATAGTTGATATCCGTTTTCCTAGTTTTGGATAATTATACAGTGTTCATTGTCCAATAAGCACAAGGTTCCACGTAACTCTGACAGCTACAAGTGGACCTTCCAGTTCTGAACTGTCAAAACAGTTTACCCTACTCGAAAAGTCATTGTAAAGCAATACGAATGAACAGAAAACAAATTTACAAGGGAACCAATTAAGGACCCCTTTGAAACGCAAGATAGAAAAAAAGACGTAGGGATTGAATTAGCATATTTCTCTTGTCCTACGGGAATGGAAAACGTACAAAAGATGAAGAGAAACCCTTTGATAGCATCATAGGAAATTAACAAAGCAAAGGAAAGTTTCCAAGAGGTTAGACCCTCTTGCTTATTTTCCTATAAAATTTAACTATAACAATACAACCCTACGAAAAATGTCCTATCTTTCCTATGAATCAACAGACTCCATAGGAAATTTTCCTTTAAAAAAATTACATCCTCAAAATTTCTATGACAATCCTCCATATCAAAGGGGTACTAAGTAAATTAAAAAGAACTTACAAGAAATGATATTGTACCACCATGAAAAATTTTAAAAGTAAACTCAACTTTGTTCATGAGATAACAAATAAAAAACAAACAAATAAATATGATGATTTCATATATCTCAAACAAAATTGAGCAGAGCCAAATATATTATTACATGATTATGTTATATCAGCTCCTCTACATGTTACATGTAACTCGGACAAGGCTTTCCATGTAGGGAATCACCATGTAGACGTAGGGTTCTCCCGGGGGACTCTGGTAGTTGAGTTGATCCATGCGTGCCACTTCTTTTATGTCTTCACTTGACTGGTGGTTGTGGTGGTACAGATGTGGACCCCTTTGAAGAAGTAATTGATCATGAGGAAGAATATCTAATGGAATGTACAAGTCATTTGGCCCGGGTACGTTAATGCTGAAGCGCTGATCCCACTGATTGCCATTGTACATCCATAACTGTTGTTGACCTGATATGAATAAACCTACGCATAACTCCCCGTCTAGCTCTGATACGAGTGATGTTCCATGGTTCAATGGCAAATATGGGCAGGGATGGGGGATAAGACTAAATGTTTCATCTTCTAAGCTGAAGCAAAGGAAACCACGTGATTGTCCTTTGAGGAACCTCTCATCGATATTCCAAAAAAGATATCCCTTGGAGTGAATGGGACTTTCCATAGAGCGAACTGGGTATGGTGGAACCTCTGATGTCTCCCTCCAGAAGGCATCCTGACCAATTGAGAACACTTCCATAGCTGCATCATAAGTCCCAATAGTATGGTCTACAGAACGGTAGAAGTATCGAGCAACCTTGTACATGTTGGTGCGAGGGTCAAGACCCAGCCCAGTTGCCTGCCTCAGCGTATCAGACTCTTGGTTGTCAGGCAACCTAAGAACATCACTTGTGGTCAGGTTGATCACATACAACTTGGTGTCAGTTGGGAATAACACCAGGCCATCACAGTGAGACATTTTATTGATTATCTGATACTCACCATGGAAATCCATTGCATGCACAAGGCATGCATTGCCCTGGCCATCCTTCCACCGGAAGACGGGGACATTATTCGAGAAAGTAATTTCAACCACATTGTCCAGCGCATGCAAAATGACAAAAAAGGAGGGCTCCTGTTTATGCTTGAAGGCAGAGTGGCGGAGATGACTGCGGATGAAGAATGGTTCAGAGATGATGGTGTGCCATGCCTTGCAGACAGACTTGAAACGAGCAAGAGTTTTCGCCGGCAGCCTGATAAAAATCTCCATGAGGACCTCGTCTAACAACTGAGGGATGGAAGCCCTGTTCACTCTTCTCCTCTTGTATGTTTTGAGCATTTCTTGGTCTGCTGGATTGATGTTTCTGCTTATGCTCAGCATGGTGTTCTTACGTGTCGTGAATGTCTTCTTTCTTGGGCTGATGTTGCTGTCGTCCAGCATCATACTCTTTGCGGTATTCAAGTCCATGGCGTAATAAGCACTAGCAACAGCAAATATACCTCGTTAACAGAAATATGGGTGGAATACCGTATACTCAGGGCAGGGGGTGCTGTCTATGCTAGCAATGACTGGATTAGATGCCTTGTAGCATGCATGGAGTCTTATAACTAGTTATAAACACACCCAGCATAAGAACATCCGGTTATGTATACCGAAACGGATTCTACTCCGTGTTCGGCCCGGATCAGGCGACGAGCGATTAAACGTGACGGGTTATGAGGCATGAATAAAATAGGCCAAGATTTTTTTTTAGAGGGCAAAAGCTTTGCCTCGTATATTAATAGAGATGGAGAAAAAAAAAACAACTACTTCCTCCGTCCCAAAATAAGTGCAGTTTTGCACTATTCATGTTCAACGTTTGACCGTCCGTCTTATTTGAAAATTTTTTATGATTAGTATTTTTATTGCTATTAGATGATAAAACATGAATAGTACTTTATGTGTGACTAAATGTTTTTAATTTTTTCACAAATTTTTCAAATAAGACGGACGGTTAAACGTTGAACGTAAATAGTGCAAAACTGCACTTATTTTGGGACGGAGGTAGTAGTATATTAATAGAGATAGAGAAAAAAAAACAGATCACAGGGGAAGCCTCAAAAGCTAAACCCATGGGAACCCGTCAAAGAGGTTAAGTAATATCTCCTAAATAAGAGGTTAAGTGATATCTTCCAAAATAGGCCAAGTAAAGCGAAAGAAAGTTTGTCACCTTGGGAGCACTCGAAGTTACCCCGGTGCGACGTGGCGGCGGCCCTGCGCCGAAGTTAAGGAAGAAGAAGGACGGCGGCAGGGGAGTTAGGGGGTGGAGTAGAGTTGGCGGTGGGTAAGCCCTGCAGGCCTCGGTGAAGCAGGGGCAACGGTGATGGATCGGTGGAGGGAGCGGCGCGTCTCCTGCGACAACTGGAGTTGGGGGAGCGAGAGGCGGATCTGGGAGAAGAGGGGATTTCTGAACGAATATACTACTAGACGGACGGAACAGCCC

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CDS seq

ATGGACTTGAATACCGCAAAGAGTATGATGCTGGACGACAGCAACATCAGCCCAAGAAAGAAGACATTCACGACACGTAAGAACACCATGCTGAGCATAAGCAGAAACATCAATCCAGCAGACCAAGAAATGCTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTGTTAGACGAGGTCCTCATGGAGATTTTTATCAGGCTGCCGGCGAAAACTCTTGCTCGTTTCAAGTCTGTCTGCAAGGCATGGCACACCATCATCTCTGAACCATTCTTCATCCGCAGTCATCTCCGCCACTCTGCCTTCAAGCATAAACAGGAGCCCTCCTTTTTTGTCATTTTGCATGCGCTGGACAATGTGGTTGAAATTACTTTCTCGAATAATGTCCCCGTCTTCCGGTGGAAGGATGGCCAGGGCAATGCATGCCTTGTGCATGCAATGGATTTCCATGGTGAGTATCAGATAATCAATAAAATGTCTCACTGTGATGGCCTGGTGTTATTCCCAACTGACACCAAGTTGTATGTGATCAACCTGACCACAAGTGATGTTCTTAGGTTGCCTGACAACCAAGAGTCTGATACGCTGAGGCAGGCAACTGGGCTGGGTCTTGACCCTCGCACCAACATGTACAAGGTTGCTCGATACTTCTACCGTTCTGTAGACCATACTATTGGGACTTATGATGCAGCTATGGAAGTGTTCTCAATTGGTCAGGATGCCTTCTGGAGGGAGACATCAGAGGTTCCACCATACCCAGTTCGCTCTATGGAAAGTCCCATTCACTCCAAGGGATATCTTTTTTGGAATATCGATGAGAGGTTCCTCAAAGGACAATCACGTGGTTTCCTTTGCTTCAGCTTAGAAGATGAAACATTTAGTCTTATCCCCCATCCCTGCCCATATTTGCCATTGAACCATGGAACATCACTCGTATCAGAGCTAGACGGGGAGTTATGCGTAGGTTTATTCATATCAGGTCAACAACAGTTATGGATGTACAATGGCAATCAGTGGGATCAGCGCTTCAGCATTAACGTACCCGGGCCAAATGACTTGTACATTCCATTAGATATTCTTCCTCATGATCAATTACTTCTTCAAAGGGGTCCACATCTGTACCACCACAACCACCAGTCAAGTGAAGACATAAAAGAAGTGGCACGCATGGATCAACTCAACTACCAGAGTCCCCCGGGAGAACCCTACGTCTACATGGTGATTCCCTACATGGAAAGCCTTGTCCGAGTTACATATTCTTCGAGAGACCTGAAACTCCATGTTGGTATCACAGCAGGGCATGCACTCCTCCCTTCTGATTACAATCCATTTTATTCTGGATTTGTCAACAGAGATACAGATAAGCTTAGTTACAAAAAGATGGGAATTCCAAAAGGGAAAATCTTTATCATCAACCCGAAGGAAGACTACAATTCCTGGAATTACTGGAAGATGCCATCTCCAAATGTTGATCTGTAG

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Protein seq

MDLNTAKSMMLDDSNISPRKKTFTTRKNTMLSISRNINPADQEMLKTYKRRRVNRASIPQLLDEVLMEIFIRLPAKTLARFKSVCKAWHTIISEPFFIRSHLRHSAFKHKQEPSFFVILHALDNVVEITFSNNVPVFRWKDGQGNACLVHAMDFHGEYQIINKMSHCDGLVLFPTDTKLYVINLTTSDVLRLPDNQESDTLRQATGLGLDPRTNMYKVARYFYRSVDHTIGTYDAAMEVFSIGQDAFWRETSEVPPYPVRSMESPIHSKGYLFWNIDERFLKGQSRGFLCFSLEDETFSLIPHPCPYLPLNHGTSLVSELDGELCVGLFISGQQQLWMYNGNQWDQRFSINVPGPNDLYIPLDILPHDQLLLQRGPHLYHHNHQSSEDIKEVARMDQLNYQSPPGEPYVYMVIPYMESLVRVTYSSRDLKLHVGITAGHALLPSDYNPFYSGFVNRDTDKLSYKKMGIPKGKIFIINPKEDYNSWNYWKMPSPNVDL

Function Phosphatidate phosphatase PAH1 [UniProtKB/Swiss-Prot:Q9SF47]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_01G025890 OsN22_01G025890_01 Chr01 25303618 25309801 - NAM
CDS seq

ATGGACTTGAATACCGCAAAGAGTATGATGCTGGACGACAGCAACATCAGCCCAAGAAAGAAGACATTCACGACACGTAAGAACACCATGCTGAGCATAAGCAGAAACATCAATCCAGCAGACCAAGAAATGCTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTGTTAGACGAGGTCCTCATGGAGATTTTTATCAGGCTGCCGGCGAAAACTCTTGCTCGTTTCAAGTCTGTCTGCAAGGCATGGCACACCATCATCTCTGAACCATTCTTCATCCGCAGTCATCTCCGCCACTCTGCCTTCAAGCATAAACAGGAGCCCTCCTTTTTTGTCATTTTGCATGCGCTGGACAATGTGGTTGAAATTACTTTCTCGAATAATGTCCCCGTCTTCCGGTGGAAGGATGGCCAGGGCAATGCATGCCTTGTGCATGCAATGGATTTCCATGGTGAGTATCAGATAATCAATAAAATGTCTCACTGTGATGGCCTGGTGTTATTCCCAACTGACACCAAGTTGTATGTGATCAACCTGACCACAAGTGATGTTCTTAGGTTGCCTGACAACCAAGAGTCTGATACGCTGAGGCAGGCAACTGGGCTGGGTCTTGACCCTCGCACCAACATGTACAAGGTTGCTCGATACTTCTACCGTTCTGTAGACCATACTATTGGGACTTATGATGCAGCTATGGAAGTGTTCTCAATTGGTCAGGATGCCTTCTGGAGGGAGACATCAGAGGTTCCACCATACCCAGTTCGCTCTATGGAAAGTCCCATTCACTCCAAGGGATATCTTTTTTGGAATATCGATGAGAGGTTCCTCAAAGGACAATCACGTGGTTTCCTTTGCTTCAGCTTAGAAGATGAAACATTTAGTCTTATCCCCCATCCCTGCCCATATTTGCCATTGAACCATGGAACATCACTCGTATCAGAGCTAGACGGGGAGTTATGCGTAGGTTTATTCATATCAGGTCAACAACAGTTATGGATGTACAATGGCAATCAGTGGGATCAGCGCTTCAGCATTAACGTACCCGGGCCAAATGACTTGTACATTCCATTAGATATTCTTCCTCATGATCAATTACTTCTTCAAAGGGGTCCACATCTGTACCACCACAACCACCAGTCAAGTGAAGACATAAAAGAAGTGGCACGCATGGATCAACTCAACTACCAGAGTCCCCCGGGAGAACCCTACGTCTACATGGTGATTCCCTACATGGAAAGCCTTGTCCGAGTTACATATTCTTCGAGAGACCTGAAACTCCATGTTGGTATCACAGCAGGGCATGCACTCCTCCCTTCTGATTACAATCCATTTTATTCTGGATTTGTCAACAGAGATACAGATAAGCTTAGTTACAAAAAGATGGGAATTCCAAAAGGGAAAATCTTTATCATCAACCCGAAGGAAGACTACAATTCCTGGAATTACTGGAAGATGCCATCTCCAAATGTTGATCTGTAG

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Protein seq

MDLNTAKSMMLDDSNISPRKKTFTTRKNTMLSISRNINPADQEMLKTYKRRRVNRASIPQLLDEVLMEIFIRLPAKTLARFKSVCKAWHTIISEPFFIRSHLRHSAFKHKQEPSFFVILHALDNVVEITFSNNVPVFRWKDGQGNACLVHAMDFHGEYQIINKMSHCDGLVLFPTDTKLYVINLTTSDVLRLPDNQESDTLRQATGLGLDPRTNMYKVARYFYRSVDHTIGTYDAAMEVFSIGQDAFWRETSEVPPYPVRSMESPIHSKGYLFWNIDERFLKGQSRGFLCFSLEDETFSLIPHPCPYLPLNHGTSLVSELDGELCVGLFISGQQQLWMYNGNQWDQRFSINVPGPNDLYIPLDILPHDQLLLQRGPHLYHHNHQSSEDIKEVARMDQLNYQSPPGEPYVYMVIPYMESLVRVTYSSRDLKLHVGITAGHALLPSDYNPFYSGFVNRDTDKLSYKKMGIPKGKIFIINPKEDYNSWNYWKMPSPNVDL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 4.301867 0.434416

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0637100 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g45020 RBH 0.058614 0.000000 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os01g0637100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0026570 RBH 0.105484 4.366307 1.408566
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0026180 RBH 0.093702 0.000000 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0026530 RBH 0.000000 4.927014 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0025840 RBH 0.0 0.013411 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0025600 RBH 1.828895 8.595649 5.299559
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0025260 RBH 0.169647 0.374669 0.329702
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0419000 RBH 1.994211 2.564714 7.456308
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0025550 RBH 0.048675 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0025480 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0025790 RBH 0.0 11.129697 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0025790 RBH 0.000000 0.569977 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0025650 RBH 0.275788 2.431330 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0025660 RBH 0.000000 6.519798 1.477446
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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