Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_01G015690 | OGI:01042140 | 11/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr01:13873395-13877413 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAAGTCCCCGGGGAAGCCAGCAACGTTTTCTGGGCCATCAGCACAAATGGAATCACGGCAGCTGCCACGAACAGGTGTCTGAAGAAACAAGCGATCTTGGCAGAAGCATCGACTGGTAGCTTGGGTAGGTTGTTGCGGTGCGTCAGAAGCCTCCACAGGAGGCCCCAGATCACCGCAGCTGCCGTCAGGACAATGAACGCATCAGTTGTGTGGCCTCTAACCGGGTAGCCACTACCATTGCCCAGACTGGTTATCGACACGGCCAAGAAGCCGGTGAACGTGATCTTGGTCAGCTCCAGCGACGCCGGCTTATCAAGTTCTCCAACACCAACATTGGCATCGAGGACCGTCTGGTTCGGCTTCGTATCCGAATCCGGCTGTGTTTCCGTCTGGTTCGGCTGCGGTGGGTTCTGAGGATTGAGTTCATGGCGGCACCAGTAGATGGCGTAGACCAGGAGCATGACGAGCCATGGGACAGCCACCACCGTAGCTGCTACCTCCTCCGGGAGAGCCATGACGACAATGGTGAACACGTACGACGAGGGTGACGAACGCGGCCAGGACGAGACACAACGCGTCGAAGAACGACCACATATTTGTCCGCTGCCGGTCGTCGTCCTCGATAAGCGGCGGGATCGCACCCAGCAGCATGATGACCGCTGCCATGACGCATGTGGCGAAGCCGAGGTACAGTGCGGTGGCAGACCGGCTGTTGAGGCCTACTTGCTGGCCGATGCTGGCTTGCCCCTCCAACGCCATGCCTTCCAGCGCGAGAAACAGCATCGCCGTGACGGTGGCAGAGAAATCCAGGGAGTCCTGGAGCTTGATGTGGCAGTTCCTGTTGTATACCCTTTGGTCGTAATCTTTGTCGTTTTGCGAGCACCAGTAGCAGCGCCACAAGATGAACATGATGAATGGGACTAAGAAGACGAAGAACAGCTTAGCTTCCATGGTGATGAGAAGAAGAATCAGGTAGGCAAGAATCATCTGGACGATGGCACAAAAGTGGACAAGCACCTTAGAGACACGAAATAGGCCGTCTGAAAATCGTTCCAAAAGGCCCGCTAGTACCGCCGACATATTGAGGAAGAGGAAAGGCAGCAGGCATAACCACAGGCTAGACGCAGCGATTGGGGATATTCTTCGTGCAAGTCCATTTCCTTTGCTCTTGACGTCAACTTTGTTCAGAACGACGGCAAGAAGAACCGGGCATGCCATGAGGACGACGCCCTCGGAGAAAGAGCGGACACGATTCACCAGGGGATCCTGAAATTCGCAAAGGCAATGCTTATAGTTTATTTTTCAATATGCAAAGAGAAGTAGGGCACAAAACACTATTACAATACCCCAAATATGTAGCGGCTCATAGATTCTGGTTCATTCAAAACCGATGCCTACCGACCATTTTCCACCTCTCACAAGATAGGAAAATATAAAACCAACACCTTTAAACATACCGGTTCTAAATAAAAACCGGCATATATAATAATGGTGTCAGTTCTTATAAAAGAACTAACACCTATAACATATAATATGTGTCAATTTTAAAGGACCAACATGTCGGTTCTTTCTAAAAAGAACCGACACCTCTGAAAAGAAAAAAATGATATGACGAGCGGAACGGAGCAAAATACCTTATCTACTCACACGACTCGTCCTTATCCTCAACTCTCTCTCTCTCTCTCTCGTGCGCGTCTCCTCTTCAGCGTATCTCCCTCTCCAGTGCGTCTTCATGCCCTCCATTGATGCCTCTGACTCTCTGAGCCCAACGGTTGGCGACTCGTGTTTCTTGACGATGCGGTGGTGGAGGCGATCTTGCCCTATGTCCAAGAAGTGCAACAAAGGCTAGTCTAGAGTGACCTGACCTATTTCCCTAGCGACCAGAAGATCTCCTCTGGAGGTGGCCAGATCCGATCTATCCTAGCTAAGAGGCGTTGAGATATTGCAAGAGACTGCACATCCCTCACCTTGATTGGTCCATTTGATTTGGTTTTTTTAGACTGGTCGATTATGGTTGAATATTTTATTCTATGATGTGAACTTGTTGATGAAGGTTTGATTGTGTGATACGTGATGTGAAGTTGTTGATTCTCTAATGTGAACTTGATTTTTTTTTAGTTTTTTTTTCTTTAATTTTGGTGGCTTTGAAACATGAACTCAAATTGACCCAAACCGATTCCTTTTTTATTTCACAAACCGTACATCCCATAGGTGCCTGTCCGCACATAGGTACCCCCTGTTGGGTGCCGGTTTGGAAACCGGCACATATGATAAGTTTTCAACTGACACCCATTTAAGGTACCGTAGTAGTGATAGGATTAAGTTTATATATACAGTAAAAAATAGTTAGAATAGTTTTGAAAGTTACAAAAGTATTGTAATGCAAATTTCATAAATTCTGAATAACTTGAAAGAAATATATATTGCTAACATGCAATCGATCATCTAGGCAAAAATCACGTTGTTTTTGCAATCAAGATGGATAACTACATTATAATTTCTATATAAGTTGTATCTAAATATTAAAAAACTAGATGATGCCCCACGTCTTGCTGCGAGATATACGTTAGATATTGGAGAAATGATGAAATGATTAGGATTGAAATATTATGAAAATGATTTGAGAATGATGATTTAGCATATGTATGCTTAGTTTTAGAATGAAATAAATTATAGTTATAATTACTATATGCTTGCATTTGAGCTTTGTGTACTTAATGGGTTGATGTAATGTAGGTTTAGCAGTGCTAGTAAATAGTATGTTTGTATGTTGAGGTTTAGGTATTTAGTGGGCGTTAGCTTTATAGAAAAAAGAGATGTGCTCCACACCAAATTTTCCATTCTCTCCGCACAAATATCGATGATATCTGAAGTTAAAATACAGTTGTAGCGTACTCTCTCCATGCCATGAAAAATGAATCTAATACTGGATGTGGCATATTCTAATATAAAGAATATATATAGATGTATGTCCAGATTCGTAGTATTAGGATGTGTCACATCCAGTACTATGTTGGTCTTTTATGGGACGTAGGGAGTAGTTATATATTACAATTATATCATAGTTAAATGTTTTTCACCTAAATACTGGTGACTTTTTTTTTAGTATTTTAGCTACTACGGAACATATCATTTGTATCATTTGTGACGGATCGTAAGGTTCATATTTGTCAAGTTGGCGTCTCATCAGTGCTGAGAGACAATGATGAGAAAACCTTATCTATTACTGTGTTTAGTTACCTTCAAAGTTTCAAAAATTCCGTCACATTAAATGTTTGGACACATGTATCGAGCATTAAATATGAAAAAAAAAAACCAATTGCACAGTTTGCATGTAAAATTGCGAGACGAATCTTTTGAGCCTAATTACGCCATGATTTAACAATGTGATGCTACAGTAAACATTTGCTAATGATGAATTACTTAGGCTTAATAAATTCGTCTCGCAGTTTATAGGCGGAATCTGTAATTTGTTTTTTTATTATTCTACGTCTAATACTTTAAATGTGTGTCCGCATACTTAAAAAAATTTGGTTGTGGAACTAAACACAGCCTATATATGTCTCGGATGAGTATCATTCTACCACAATTAATGATTTTATTGTCTTTGTTACAATTTTATCAGAATATCATATAGCTCTGTACTATTAACTACTACATAATCTTAAAAATCTGACTATTTTTTTATTTATATAAAATGTGTCCAATGCGTAGTATCGTCCGTGTAAAATATATTACTAGTAGGTTTCAATTTCACTGTTGATATGAGAGAGGTTATTCAGCTCACTGTGATAGAATAATGGAATGTGAGTTGATTATGTCACGATGAGTGAAATATAGTTACATAACAAATAAGATATATATATATATATATATATGGAGTGTGGCTACCGCATGAAATGTTCAAAACTGTTCTAGCTAGTTCTTGACAATTACAATAAGTTGAGCACATACATGTATATGATCATGCATGCATGCAACTGGGGAAGAAGAGGTTGAGAGAGTGCAAGCTTACCAT
More
|
||||||||||
| CDS seq | ATGGATCCCCTGGTGAATCGTGTCCGCTCTTTCTCCGAGGGCGTCGTCCTCATGGCATGCCCGGTTCTTCTTGCCGTCGTTCTGAACAAAGTTGACGTCAAGAGCAAAGGAAATGGACTTGCACGAAGAATATCCCCAATCGCTGCGTCTAGCCTGTGGTTATGCCTGCTGCCTTTCCTCTTCCTCAATATGTCGGCGGTACTAGCGGGCCTTTTGGAACGATTTTCAGACGGCCTATTTCGTGTCTCTAAGGTGCTTGTCCACTTTTGTGCCATCGTCCAGATGATTCTTGCCTACCTGATTCTTCTTCTCATCACCATGGAAGCTAAGCTGTTCTTCGTCTTCTTAGTCCCATTCATCATGTTCATCTTGTGGCGCTGCTACTGGTGCTCGCAAAACGACAAAGATTACGACCAAAGGGTATACAACAGGAACTGCCACATCAAGCTCCAGGACTCCCTGGATTTCTCTGCCACCGTCACGGCGATGCTGTTTCTCGCGCTGGAAGGCATGGCGTTGGAGGGGCAAGCCAGCATCGGCCAGCAAGTAGGCCTCAACAGCCGGTCTGCCACCGCACTGTACCTCGGCTTCGCCACATGCGTCATGGCAGCGGTCATCATGCTGCTGGGTGCGATCCCGCCGCTTATCGAGGACGACGACCGGCAGCGGACAAATATGTGGTCGTTCTTCGACGCGTTGTGTCTCGTCCTGGCCGCGTTCGTCACCCTCGTCAACCCACCGCAGCCGAACCAGACGGAAACACAGCCGGATTCGGATACGAAGCCGAACCAGACGGTCCTCGATGCCAATGTTGGTGTTGGAGAACTTGATAAGCCGGCGTCGCTGGAGCTGACCAAGATCACGTTCACCGGCTTCTTGGCCGTGTCGATAACCAGTCTGGGCAATGGTAGTGGCTACCCGGTTAGAGGCCACACAACTGATGCGTTCATTGTCCTGACGGCAGCTGCGGTGATCTGGGGCCTCCTGTGGAGGCTTCTGACGCACCGCAACAACCTACCCAAGCTACCAGTCGATGCTTCTGCCAAGATCGCTTGTTTCTTCAGACACCTGTTCGTGGCAGCTGCCGTGATTCCATTTGTGCTGATGGCCCAGAAAACGTTGCTGGCTTCCCCGGGGACTTGA
More
|
||||||||||
| Protein seq | MDPLVNRVRSFSEGVVLMACPVLLAVVLNKVDVKSKGNGLARRISPIAASSLWLCLLPFLFLNMSAVLAGLLERFSDGLFRVSKVLVHFCAIVQMILAYLILLLITMEAKLFFVFLVPFIMFILWRCYWCSQNDKDYDQRVYNRNCHIKLQDSLDFSATVTAMLFLALEGMALEGQASIGQQVGLNSRSATALYLGFATCVMAAVIMLLGAIPPLIEDDDRQRTNMWSFFDALCLVLAAFVTLVNPPQPNQTETQPDSDTKPNQTVLDANVGVGELDKPASLELTKITFTGFLAVSITSLGNGSGYPVRGHTTDAFIVLTAAAVIWGLLWRLLTHRNNLPKLPVDASAKIACFFRHLFVAAAVIPFVLMAQKTLLASPGT |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_01G015690 | OsN22_01G015690_01 | Chr01 | 13873395 | 13877413 | - | NAM | ||
| CDS seq | ATGGATCCCCTGGTGAATCGTGTCCGCTCTTTCTCCGAGGGCGTCGTCCTCATGGCATGCCCGGTTCTTCTTGCCGTCGTTCTGAACAAAGTTGACGTCAAGAGCAAAGGAAATGGACTTGCACGAAGAATATCCCCAATCGCTGCGTCTAGCCTGTGGTTATGCCTGCTGCCTTTCCTCTTCCTCAATATGTCGGCGGTACTAGCGGGCCTTTTGGAACGATTTTCAGACGGCCTATTTCGTGTCTCTAAGGTGCTTGTCCACTTTTGTGCCATCGTCCAGATGATTCTTGCCTACCTGATTCTTCTTCTCATCACCATGGAAGCTAAGCTGTTCTTCGTCTTCTTAGTCCCATTCATCATGTTCATCTTGTGGCGCTGCTACTGGTGCTCGCAAAACGACAAAGATTACGACCAAAGGGTATACAACAGGAACTGCCACATCAAGCTCCAGGACTCCCTGGATTTCTCTGCCACCGTCACGGCGATGCTGTTTCTCGCGCTGGAAGGCATGGCGTTGGAGGGGCAAGCCAGCATCGGCCAGCAAGTAGGCCTCAACAGCCGGTCTGCCACCGCACTGTACCTCGGCTTCGCCACATGCGTCATGGCAGCGGTCATCATGCTGCTGGGTGCGATCCCGCCGCTTATCGAGGACGACGACCGGCAGCGGACAAATATGTGGTCGTTCTTCGACGCGTTGTGTCTCGTCCTGGCCGCGTTCGTCACCCTCGTCAACCCACCGCAGCCGAACCAGACGGAAACACAGCCGGATTCGGATACGAAGCCGAACCAGACGGTCCTCGATGCCAATGTTGGTGTTGGAGAACTTGATAAGCCGGCGTCGCTGGAGCTGACCAAGATCACGTTCACCGGCTTCTTGGCCGTGTCGATAACCAGTCTGGGCAATGGTAGTGGCTACCCGGTTAGAGGCCACACAACTGATGCGTTCATTGTCCTGACGGCAGCTGCGGTGATCTGGGGCCTCCTGTGGAGGCTTCTGACGCACCGCAACAACCTACCCAAGCTACCAGTCGATGCTTCTGCCAAGATCGCTTGTTTCTTCAGACACCTGTTCGTGGCAGCTGCCGTGATTCCATTTGTGCTGATGGCCCAGAAAACGTTGCTGGCTTCCCCGGGGACTTGA
More
|
|||||||
| Protein seq | MDPLVNRVRSFSEGVVLMACPVLLAVVLNKVDVKSKGNGLARRISPIAASSLWLCLLPFLFLNMSAVLAGLLERFSDGLFRVSKVLVHFCAIVQMILAYLILLLITMEAKLFFVFLVPFIMFILWRCYWCSQNDKDYDQRVYNRNCHIKLQDSLDFSATVTAMLFLALEGMALEGQASIGQQVGLNSRSATALYLGFATCVMAAVIMLLGAIPPLIEDDDRQRTNMWSFFDALCLVLAAFVTLVNPPQPNQTETQPDSDTKPNQTVLDANVGVGELDKPASLELTKITFTGFLAVSITSLGNGSGYPVRGHTTDAFIVLTAAAVIWGLLWRLLTHRNNLPKLPVDASAKIACFFRHLFVAAAVIPFVLMAQKTLLASPGT
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0347300 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g24350 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0347300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0016040 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0015660 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0015900 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0015360 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0015450 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0228800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0015440 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0230100 | SBH | 0.0903725 | 8.821078 | 0.029314 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0015480 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0015320 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0015490 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0015440 | RBH | 0.147874 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0015250 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G015800 | SBH | 0.0 | 0.0 | 0.267001 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0015460 | RBH | 0.0 | 0.0 | 0.0 |
