Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0316100 | OGI:12061960 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:22312778-22315090 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCCAGGAGCCCCCGACCCCCAGGAAGGCCCCGAGGCCACTGTGGGAAGGCCGCTCCTGTCATCCTCCGACCCCGAGGTCATCGGCACAGGAGACGAGTGTGCCCCGAGAGGCCACTTGGATGAAGAACGCCCTGGGGATACGGCCCCTAGCGAAAAGGATCGGCCCCGCCAAAAGGTGCAGCGGCCTGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAGACCCGATACCCCCAGGCCCAGAAGATGCTTTATGCTATTCTGATGGCCTCGAGGAAACTGCGTCATTACTTCCAGGCGCATCGGGTCACTGTGGTTACGTCTTACCCCCTCGGTCAAATCTTGCGTAATCGAGAGGGTACAGGACGGGTGGTAAAATGGGCAATCGAGCTTTCTGAGTTCGATCTGCACTTTGAACCACGCCACGCCATCAAGAGCCAGGCCCTCACCGATTTTGTGGCAGAGTGGACCCCGGCTCCAGAGACCGTCTCAATCCCCGAGGCCGGCACGGACCCCTCACATTCCGCCCACTGGGTGATGCAGTTCGACGGTTCTCTGTCTCTCCAGGGCGCTGGTGCGGGGGTCACGTTGACCTCCCCGAACGGAGACGTCCTCAGATACTTGGTCCGACTCGATTTTCGAGTGACTAACAATATGGCAGAGTACGAGGGACTCCTTGCCGGACTCCGAATGGCAGCTGGACTGGGGATCCGCCGCCTCCTGGTGTTAGGCGACTCCCAGCTGGTCGTTAACCAGGTCAGCAAGGAGTACCGATGCTCTGACCCACAGATGGACGCCTACGTACGCCAAGTGCGGCGTATGGAGCGCCATTTTGATGGAATAGAGCTTCGGCATGTACCCAGACGGGATAACATGGTTGCCGACGAACTCTCACGGCTCGCGTCATCGCGAGCCCAGACCCCACCGGGCGCCTTTGAAGAAAGGCTTACCCAGCCGTCGGCGCGACCCGACCCCTTAGGGGAGACGGATGCGCCTGACCGGCCCCCGAGGCCCGTCGGAGTCCAGGCCTCGGGACCCGAAGGGAGCGCTCCAAGCTCCCTTAGATTGATTGCTTGGATCTCTGAGATCCAAGCATACCTCACAGATAAGACTCTACCTGAGGATCGCGAAGGGAGTGAACGCGTCCAACGCATTTCCAAACGCTACGTGCTGGTAGAAGGGACCCTCTATCGGCGCGCGGCTAACGGAATCCTCCTGAAGTGCATTCCTCAGGAACAAGGCGTTGAGCTTCTTGCCGACATCCATGAAGGCGAGTGCGGAGCCCATTCTGCCTCGCGCACCTTGGTTGGCAAGGCCTTTCGTCAAGGATTTTATTGGCCGACAGCTCTCAATGATGCAGTCGATCTGGTCCGGCGATGCAGAGCGTGTCAGTTTCACGCCAAGCAAATCCATCAGCCGGCCCAGGCCCTGCAGATCATACCACTTTCGTGGCCGTTTGCTGTCTGGGGGCTCGATATCCTGGGACCGTTTAAGCGGGCCCCGGGCGGGTTTGAGTATCTGTATGTCGCGATCGACAAGTTCACTAAGTGGCCCGAGGCTTATCCGGTCGCCAAGATCGATAAGCACTCTGCACTTAAATTCATTAAAGGCATCACGGCCCGTTTTGGAGTGCCTAACCGTATTATTACGGATAATGGCACCCAATTCACTAGTGAACTCTTCGGCGACTATTGCGAAGACATGGGCATCAGGCTCTGCTTCGCCTCACCTGCCCACCCCAGAAGCAATGGCCAAGTGGAGCGCGCCAATGCAGAAATCCTCAAAGGCCTTAAGACCAAGACCTTCAATATTCTCAAGAAGCACGGCGATTCATGGATCGAGGAGTTGCCAGCGGTGCTCTGGGCGAACCGAACCACACCAAGCCGAGCGACCGGGGAAACGCCTTTCTTCCTCGTCTACGGCGCAGAAGCGGTTCTCCCATCCGAGCTTACCCTGAAGTCTCCTCGGGCCACCATGTACTGCGAGGCTGATCAAGATCAGCTTCGTAGAGATGACCTCGACTACTTGGAAGAGCGAAGGCGACGCGCGGCCCTCCGAGCTGCGCGCTACCAGCAGAGCCTGCGGCGCTATCATCAGCGCCACGTCCGGGCCCGATCACTCTGCGTCGACGACCTTGTCCTACGCCGCGTCCAAACGCGTGCTGGACTGAGCAAGCTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATCGGTGTCCCCCGGCCGGGCTCCATACGGCTGGCCACGGGCGACGGCACGGAGTTGCCTAATCCGTGGAACATCGAACACCTTCGTCGCTTCTACCCCTGA
More
|
||||||||||
| CDS seq | ATGCCAGGAGCCCCCGACCCCCAGGAAGGCCCCGAGGCCACTGTGGGAAGGCCGCTCCTGTCATCCTCCGACCCCGAGGTCATCGGCACAGGAGACGAGTGTGCCCCGAGAGGCCACTTGGATGAAGAACGCCCTGGGGATACGGCCCCTAGCGAAAAGGATCGGCCCCGCCAAAAGGTGCAGCGGCCTGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAGACCCGATACCCCCAGGCCCAGAAGATGCTTTATGCTATTCTGATGGCCTCGAGGAAACTGCGTCATTACTTCCAGGCGCATCGGGTCACTGTGGTTACGTCTTACCCCCTCGGTCAAATCTTGCGTAATCGAGAGGGTACAGGACGGGTGGTAAAATGGGCAATCGAGCTTTCTGAGTTCGATCTGCACTTTGAACCACGCCACGCCATCAAGAGCCAGGCCCTCACCGATTTTGTGGCAGAGTGGACCCCGGCTCCAGAGACCGTCTCAATCCCCGAGGCCGGCACGGACCCCTCACATTCCGCCCACTGGGTGATGCAGTTCGACGGTTCTCTGTCTCTCCAGGGCGCTGGTGCGGGGGTCACGTTGACCTCCCCGAACGGAGACGTCCTCAGATACTTGGTCCGACTCGATTTTCGAGTGACTAACAATATGGCAGAGTACGAGGGACTCCTTGCCGGACTCCGAATGGCAGCTGGACTGGGGATCCGCCGCCTCCTGGTGTTAGGCGACTCCCAGCTGGTCGTTAACCAGGTCAGCAAGGAGTACCGATGCTCTGACCCACAGATGGACGCCTACGTACGCCAAGTGCGGCGTATGGAGCGCCATTTTGATGGAATAGAGCTTCGGCATGTACCCAGACGGGATAACATGGTTGCCGACGAACTCTCACGGCTCGCGTCATCGCGAGCCCAGACCCCACCGGGCGCCTTTGAAGAAAGGCTTACCCAGCCGTCGGCGCGACCCGACCCCTTAGGGGAGACGGATGCGCCTGACCGGCCCCCGAGGCCCGTCGGAGTCCAGGCCTCGGGACCCGAAGGGAGCGCTCCAAGCTCCCTTAGATTGATTGCTTGGATCTCTGAGATCCAAGCATACCTCACAGATAAGACTCTACCTGAGGATCGCGAAGGGAGTGAACGCGTCCAACGCATTTCCAAACGCTACGTGCTGGTAGAAGGGACCCTCTATCGGCGCGCGGCTAACGGAATCCTCCTGAAGTGCATTCCTCAGGAACAAGGCGTTGAGCTTCTTGCCGACATCCATGAAGGCGAGTGCGGAGCCCATTCTGCCTCGCGCACCTTGGTTGGCAAGGCCTTTCGTCAAGGATTTTATTGGCCGACAGCTCTCAATGATGCAGTCGATCTGGTCCGGCGATGCAGAGCGTGTCAGTTTCACGCCAAGCAAATCCATCAGCCGGCCCAGGCCCTGCAGATCATACCACTTTCGTGGCCGTTTGCTGTCTGGGGGCTCGATATCCTGGGACCGTTTAAGCGGGCCCCGGGCGGGTTTGAGTATCTGTATGTCGCGATCGACAAGTTCACTAAGTGGCCCGAGGCTTATCCGGTCGCCAAGATCGATAAGCACTCTGCACTTAAATTCATTAAAGGCATCACGGCCCGTTTTGGAGTGCCTAACCGTATTATTACGGATAATGGCACCCAATTCACTAGTGAACTCTTCGGCGACTATTGCGAAGACATGGGCATCAGGCTCTGCTTCGCCTCACCTGCCCACCCCAGAAGCAATGGCCAAGTGGAGCGCGCCAATGCAGAAATCCTCAAAGGCCTTAAGACCAAGACCTTCAATATTCTCAAGAAGCACGGCGATTCATGGATCGAGGAGTTGCCAGCGGTGCTCTGGGCGAACCGAACCACACCAAGCCGAGCGACCGGGGAAACGCCTTTCTTCCTCGTCTACGGCGCAGAAGCGGTTCTCCCATCCGAGCTTACCCTGAAGTCTCCTCGGGCCACCATGTACTGCGAGGCTGATCAAGATCAGCTTCGTAGAGATGACCTCGACTACTTGGAAGAGCGAAGGCGACGCGCGGCCCTCCGAGCTGCGCGCTACCAGCAGAGCCTGCGGCGCTATCATCAGCGCCACGTCCGGGCCCGATCACTCTGCGTCGACGACCTTGTCCTACGCCGCGTCCAAACGCGTGCTGGACTGAGCAAGCTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATCGGTGTCCCCCGGCCGGGCTCCATACGGCTGGCCACGGGCGACGGCACGGAGTTGCCTAATCCGTGGAACATCGAACACCTTCGTCGCTTCTACCCCTGA
More
|
||||||||||
| Protein seq | MPGAPDPQEGPEATVGRPLLSSSDPEVIGTGDECAPRGHLDEERPGDTAPSEKDRPRQKVQRPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLGQILRNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALTDFVAEWTPAPETVSIPEAGTDPSHSAHWVMQFDGSLSLQGAGAGVTLTSPNGDVLRYLVRLDFRVTNNMAEYEGLLAGLRMAAGLGIRRLLVLGDSQLVVNQVSKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRRDNMVADELSRLASSRAQTPPGAFEERLTQPSARPDPLGETDAPDRPPRPVGVQASGPEGSAPSSLRLIAWISEIQAYLTDKTLPEDREGSERVQRISKRYVLVEGTLYRRAANGILLKCIPQEQGVELLADIHEGECGAHSASRTLVGKAFRQGFYWPTALNDAVDLVRRCRACQFHAKQIHQPAQALQIIPLSWPFAVWGLDILGPFKRAPGGFEYLYVAIDKFTKWPEAYPVAKIDKHSALKFIKGITARFGVPNRIITDNGTQFTSELFGDYCEDMGIRLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLKSPRATMYCEADQDQLRRDDLDYLEERRRRAALRAARYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSIRLATGDGTELPNPWNIEHLRRFYP |
||||||||||
| Function | Pro-Pol polyprotein [UniProtKB/Swiss-Prot:P23074] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0316100 | OsMH63_12T0316100.1 | Chr12 | 22312778 | 22315090 | + | maker | ||
| CDS seq | ATGCCAGGAGCCCCCGACCCCCAGGAAGGCCCCGAGGCCACTGTGGGAAGGCCGCTCCTGTCATCCTCCGACCCCGAGGTCATCGGCACAGGAGACGAGTGTGCCCCGAGAGGCCACTTGGATGAAGAACGCCCTGGGGATACGGCCCCTAGCGAAAAGGATCGGCCCCGCCAAAAGGTGCAGCGGCCTGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAGACCCGATACCCCCAGGCCCAGAAGATGCTTTATGCTATTCTGATGGCCTCGAGGAAACTGCGTCATTACTTCCAGGCGCATCGGGTCACTGTGGTTACGTCTTACCCCCTCGGTCAAATCTTGCGTAATCGAGAGGGTACAGGACGGGTGGTAAAATGGGCAATCGAGCTTTCTGAGTTCGATCTGCACTTTGAACCACGCCACGCCATCAAGAGCCAGGCCCTCACCGATTTTGTGGCAGAGTGGACCCCGGCTCCAGAGACCGTCTCAATCCCCGAGGCCGGCACGGACCCCTCACATTCCGCCCACTGGGTGATGCAGTTCGACGGTTCTCTGTCTCTCCAGGGCGCTGGTGCGGGGGTCACGTTGACCTCCCCGAACGGAGACGTCCTCAGATACTTGGTCCGACTCGATTTTCGAGTGACTAACAATATGGCAGAGTACGAGGGACTCCTTGCCGGACTCCGAATGGCAGCTGGACTGGGGATCCGCCGCCTCCTGGTGTTAGGCGACTCCCAGCTGGTCGTTAACCAGGTCAGCAAGGAGTACCGATGCTCTGACCCACAGATGGACGCCTACGTACGCCAAGTGCGGCGTATGGAGCGCCATTTTGATGGAATAGAGCTTCGGCATGTACCCAGACGGGATAACATGGTTGCCGACGAACTCTCACGGCTCGCGTCATCGCGAGCCCAGACCCCACCGGGCGCCTTTGAAGAAAGGCTTACCCAGCCGTCGGCGCGACCCGACCCCTTAGGGGAGACGGATGCGCCTGACCGGCCCCCGAGGCCCGTCGGAGTCCAGGCCTCGGGACCCGAAGGGAGCGCTCCAAGCTCCCTTAGATTGATTGCTTGGATCTCTGAGATCCAAGCATACCTCACAGATAAGACTCTACCTGAGGATCGCGAAGGGAGTGAACGCGTCCAACGCATTTCCAAACGCTACGTGCTGGTAGAAGGGACCCTCTATCGGCGCGCGGCTAACGGAATCCTCCTGAAGTGCATTCCTCAGGAACAAGGCGTTGAGCTTCTTGCCGACATCCATGAAGGCGAGTGCGGAGCCCATTCTGCCTCGCGCACCTTGGTTGGCAAGGCCTTTCGTCAAGGATTTTATTGGCCGACAGCTCTCAATGATGCAGTCGATCTGGTCCGGCGATGCAGAGCGTGTCAGTTTCACGCCAAGCAAATCCATCAGCCGGCCCAGGCCCTGCAGATCATACCACTTTCGTGGCCGTTTGCTGTCTGGGGGCTCGATATCCTGGGACCGTTTAAGCGGGCCCCGGGCGGGTTTGAGTATCTGTATGTCGCGATCGACAAGTTCACTAAGTGGCCCGAGGCTTATCCGGTCGCCAAGATCGATAAGCACTCTGCACTTAAATTCATTAAAGGCATCACGGCCCGTTTTGGAGTGCCTAACCGTATTATTACGGATAATGGCACCCAATTCACTAGTGAACTCTTCGGCGACTATTGCGAAGACATGGGCATCAGGCTCTGCTTCGCCTCACCTGCCCACCCCAGAAGCAATGGCCAAGTGGAGCGCGCCAATGCAGAAATCCTCAAAGGCCTTAAGACCAAGACCTTCAATATTCTCAAGAAGCACGGCGATTCATGGATCGAGGAGTTGCCAGCGGTGCTCTGGGCGAACCGAACCACACCAAGCCGAGCGACCGGGGAAACGCCTTTCTTCCTCGTCTACGGCGCAGAAGCGGTTCTCCCATCCGAGCTTACCCTGAAGTCTCCTCGGGCCACCATGTACTGCGAGGCTGATCAAGATCAGCTTCGTAGAGATGACCTCGACTACTTGGAAGAGCGAAGGCGACGCGCGGCCCTCCGAGCTGCGCGCTACCAGCAGAGCCTGCGGCGCTATCATCAGCGCCACGTCCGGGCCCGATCACTCTGCGTCGACGACCTTGTCCTACGCCGCGTCCAAACGCGTGCTGGACTGAGCAAGCTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATCGGTGTCCCCCGGCCGGGCTCCATACGGCTGGCCACGGGCGACGGCACGGAGTTGCCTAATCCGTGGAACATCGAACACCTTCGTCGCTTCTACCCCTGA
More
|
|||||||
| Protein seq | MPGAPDPQEGPEATVGRPLLSSSDPEVIGTGDECAPRGHLDEERPGDTAPSEKDRPRQKVQRPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLGQILRNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALTDFVAEWTPAPETVSIPEAGTDPSHSAHWVMQFDGSLSLQGAGAGVTLTSPNGDVLRYLVRLDFRVTNNMAEYEGLLAGLRMAAGLGIRRLLVLGDSQLVVNQVSKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRRDNMVADELSRLASSRAQTPPGAFEERLTQPSARPDPLGETDAPDRPPRPVGVQASGPEGSAPSSLRLIAWISEIQAYLTDKTLPEDREGSERVQRISKRYVLVEGTLYRRAANGILLKCIPQEQGVELLADIHEGECGAHSASRTLVGKAFRQGFYWPTALNDAVDLVRRCRACQFHAKQIHQPAQALQIIPLSWPFAVWGLDILGPFKRAPGGFEYLYVAIDKFTKWPEAYPVAKIDKHSALKFIKGITARFGVPNRIITDNGTQFTSELFGDYCEDMGIRLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLKSPRATMYCEADQDQLRRDDLDYLEERRRRAALRAARYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSIRLATGDGTELPNPWNIEHLRRFYP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.00602 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g37460 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0008501 | SBH | 0.367119 | 3.838377 | 2.068388 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0060600 | SBH | 0.013377 | 0.0217575 | 0.0462475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0275700 | RBH | 0.0029015 | 0 | 0.005293 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
