Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0264700 | OGI:12052750 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:18615364-18619755 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAGTCTATGACAATAAATTGGCTGGAAGGATAGCTGATGCTGTCATCGAAATGCTGAATCTTATCATCATCATCATCGCTTGTTTCTGCATATAAATTCGTACATAAGGATATGCAAAGAGTGTAAAGTATTAACAGCTATATGCAGCAGAAGCATCTAAAATGCTCCAGAAAAGACATTTTATGAGCTGAATGTTCACTGTAGACATGGAAGATAGATCATTCTTTCTAGAATGCCAGTAAGGTCAAAACAAAAGTTCTCATGTTACAGGAGACAAACAGAGTTTCTGAACAAGCAACTGTATGTCTGTAAAAAAAAAAGAGTAACCTTATTTTGTACCATAATCCTTTAACGGTAATAATTGAGGATAGTTAGTTTCATATAGAAGGTCAGGACAATAAAACAATTGTACGAAATTGCTAAGTGTTACAGCATCTTGTCGAGTAGCAGAGGTAGGAACAGGACAAGTGGGATTTTAACAGAGAATGAATTCAGGATGTGTAAGTGCGCCCTCAGCATTGAGTGCAAATCATAATGCTTGGAGGTGAGTGAATAATAAATATCTAATTGATCAAAGACACAATAACATAAAGTTGGTTGTTGCATGGAAAAGATAAAAGTTCAGAATAGAAAGAAAGTGCACCTTCAGAGTAGGCTTTCATATCCACATGATCAATGTTTTCAATTTTTCCCCAGTCTGAACCAACATTCCTTTCATAGAGCTTCAGAAACCTTGGGTCACAGCCCCAGATTGTGAGCTTATTAAGTGAAAATGGCAGCTTGGGGAGAAACTGAATTCGAGGGGCTTTTTCGATATGCAAACTCTGTAGTGATACCAACTTTTCCATCTGAGTAGGTAGGGTCTGCAGATTCTTAGCAACTCCTATCTCGATCAAACGGAGTGATGAAGCATTCTGAAGCAACCACTCCTCTGGCAAGGAATCCATTGCGTAATCATCACCAATATGCAGCTCCAAGGTGTACCTGAGGCTCTTTATTGGCTCCACCAGCAACATGGCTTCACGATCAACTTTGAGCTTCCATAGCATAAAGGAGCAGCCAGCCTGTGGAGATGATGAAGAATGGATTTTGTCACAGTACAGGATTGATAGAGTTCTCAGGGAGGCAGCAGCTCCAAGCCCACCCAGTGATAACAAGCTTTCACATCTGGCTATCAACATATCATTGAGATTTTTCAGTGTCCTAAACACTTTATCTGATGGAAGTTTTTCTACACTACTGCAACTGAACAATGATAACCTTCTGAGATAGGTGAGGTTTGGCAGTGACATGAGAACTGAAGCCTCAATATGACAGCATGGATTGATATCCAAGTTATTGAGTGATGTAGGGAACAGATTGCTGTCAGTCTTAACATTCCTCAGCATTGGGCATGCAACTATTTCTAGGAAATTCAAGTGATGTAATTCTGTGAAACCATTTGCCGGTAGATGGCATAGTTTTGCACAATGTCTCACGAGTAATGTCTTGAGGTGCTGAAGATGTTGCTGTTGATCTAGGAGACCATCCAAAGAAGTCAAATGTGCACAACTTTCAATGTGCAAAAGAGAAAGACGTGAATCTACTGATAATGATTCACATGTGCTAGCATATGCCTGATGTAATCTAGGGAGAACTGCAAGCCCAACATGCCTTATTATTAATTTCTCAAGGGTACAAGGTAAAGCAGGGAGTTTCTTCAGGTTAGGGCACCACCGGACGATCAGCGTATTGAGCAATGGGGGCAGAAATGCATTATCTGATTCTATGCTCCCAGATTGCTCCTCAATCACCGAGCCTAATTGGAAAAGGTGTTCCAGCTTTAGATACTTCAGTGAACTAAGCTCCTTAAATGATGGCAGGGTCCTCCATTCCATGCAGTATTGAAGCTCAAGTGACACCAAATGGATGAGAAATGAATTCTCGATCCAAACCGGAAGTTGGACTCCATTGTATCCATACACATGCAACTGCTGAATTCCTTTGTTTGGTTCTAGGTTATCGATGATTTGATGATCTATATCCTCTGGATCATTTGAGTGTTTGTTCCATGATAGTGACAAAAACATCATGTCTGGTTTGTCCTTTAATTTGATCTCCATTGCGTCTTTACAGTTCCTGACATTTTGGAGGTTTCTTAGGCTGAGTCGCTTAAGGTTTGTTAAAGTACTCAATGCACTCAACATGTGACCATCATTTTTAGCTACCTCGAATTCTTGTAACTCCTGAAGTGTTGTTGGCATCCCAATTTTAAGTATCTTTGATAACATACTGTCAGGAACATGAAGACAACGCAAGAAACGCATGTTCCGTATGCCATCCAAGTCTGCTTGTTTACCTGTGAAATATTTGAGCTTGAACACTTGCAGATGACAGAGTTTAAGGATACTTCGAATATGAGACTTATCACATGAAAACAGGAAGAGGTAACGGAGCTGTGTTAGACTGGGGATTTCATCAAGTGCATTAGAGAGGGATGGCACATCCAAGTATAGCAGACGCAAGCGTGCCGATTTACGAAGAACTTCTCCAAGCATAAGTTCAGCCTCTTGATCAAGACAAAATTCACTTTGTATAATAAGAGTACGTAAATTTGTTATAGGGGGGATTGCTCTTAAAGAGCCACAATGTGCAATAGACAAGTGTACTGTTGTCCACCTGACATCTTGAAAATTATTGTCATCTACTCTTGCGCATTCATTTTGTGCAACAAACTGTGCACAGTCATGCATCAAATTATGCAGGACATAATATTCTTTCATATTTCCATTAGAAGGGTCTGTTTCCAGCAAACGGCAAAAGAACGATTTCCTTACTAATGCAGCAAAGTATTGTTCCCCAACATCCTCTGCACTAAACAGGTAGGCAGCCTTCTTATGCTGTAAGCCAGTATCATCTTGTTTCGATAAGCCGAAAGGTATCAATCCAGAACTAATCCACATGTTTGCTAATTCCACCTTGTTAAATTTGTATCCCTTTGGAAATATACTAAAGTATCTAAAGCAAATTTGCAGTTCTGAAGGTAGACGTTCATAGCTCAACCTAGAACTTGCAAAAATGGCATTAAGTCCCAGTTTCTGCCAGCCTTTCTGTAGGACGGCATTCCAATGATGGTACTCCATACATGATCCCAACCATGAAGCGACCTTTTCTGTTACAAGTGGGCATCCTCCAGTATTTTCAGCTATCTGTTCACCGATCAACCGAAGATGAGAATAACCTTCAGAATGCACTTGAGAAGGCAACCGACTCATGAACAACAAGAGATTGTCACTTTTTCCCAATTCATCCAGTTCCAGACATTCAGCTGGAGACCCTACAGCTTCTGCTGCCATATCAACCACTGATTGCATTCGAGTTGTCAGCAGGATACTGCTCCCTCTCTTACAGTTACTGAGAGTAGCCACCAGTGCTTCCCACTTCTTCACACTTTCGTCTTCCCAGGTATCGTCCAGAACAAGCAAAAGCCTTTTGCCCGTAAGAGCGTGCTGCAGAAACTTTGAACTGTAGTATTCAGGCGACACACTGGTAACAGTTTCCATTATGACTTTTGCTATTGTCTCTGTAGTGAAATCATAAGGCACTTGAACCCACACAACAAAGTCGAAAATGGTTGACACAATGGGTTCTTGGCAAGCTACCTTGGCAAGTGCAGTTTTCCCCATGCCAGCCACACCCAGAATTGCAAAAAGCCGGATATGATCAGTGCTGAAGATCTCAGACTCAGAGTTTTTCGCTGGTTGCTTGATCAACCACTGCACTATTTGCTCCTTCTCCCTCTCTCGGCCAAAGACCTGTATCTCTTCCTTCTCTCTCCCTCGGCTAACCACCTCTATATCTTCCTTCTCCCTCCCTCGGCCAACTGCCACCGGAGTGGTTGCCCTGAAGGAGTGGAAAGAGATATCATTTTGTAAATATTCGCGTATTCGTGCTGCAATATCCGCTAACCTCATCAGGTGATCCAGCCCTTCCCGTATGGCATACGAATCAGGAGATTTCGCAAACTTGTTGGTGATCTTTGCCTTGAGAATATTGAAGGTCGGGTGGCGACCCTCTCCCACCAGCCCACGGTATTCGATCTCCTCGATCCAGTGCTCGAACCCCTCAATGTCAATCCTGAAACTCCAGATTTCTTTAAGATTGTAGCTGAACGGAATTTTCAGATTGGTCAGAACCAGATGACGGAACTCATCGCATATTGCTCGAACATGTCCGAGTCGTTCCAATATCTTCTCCTTGTCGACACCACCAAATCTTTTCTTGCTCCCCTTCTCCTTCTCCTTGACACCACCAAAGTAGAATAAAGCTCTGTCCATCAAAGATATGGCAACTGTCAGCAAGGGTTCGCAGAAAGACCAGTCCAGTGCTTCTTCCATTACTACCGGATCCAT
More
|
||||||||||
| CDS seq | ATGGATCCGGTAGTAATGGAAGAAGCACTGGACTGGTCTTTCTGCGAACCCTTGCTGACAGTTGCCATATCTTTGATGGACAGAGCTTTATTCTACTTTGGTGGTGTCAAGGAGAAGGAGAAGGGGAGCAAGAAAAGATTTGGTGGTGTCGACAAGGAGAAGATATTGGAACGACTCGGACATGTTCGAGCAATATGCGATGAGTTCCGTCATCTGGTTCTGACCAATCTGAAAATTCCGTTCAGCTACAATCTTAAAGAAATCTGGAGTTTCAGGATTGACATTGAGGGGTTCGAGCACTGGATCGAGGAGATCGAATACCGTGGGCTGGTGGGAGAGGGTCGCCACCCGACCTTCAATATTCTCAAGGCAAAGATCACCAACAAGTTTGCGAAATCTCCTGATTCGTATGCCATACGGGAAGGGCTGGATCACCTGATGAGGTTAGCGGATATTGCAGCACGAATACGCGAATATTTACAAAATGATATCTCTTTCCACTCCTTCAGGGCAACCACTCCGGTGGCAGTTGGCCGAGGGAGGGAGAAGGAAGATATAGAGGTGGTTAGCCGAGGGAGAGAGAAGGAAGAGATACAGGTCTTTGGCCGAGAGAGGGAGAAGGAGCAAATAGTGCAGTGGTTGATCAAGCAACCAGCGAAAAACTCTGAGTCTGAGATCTTCAGCACTGATCATATCCGGCTTTTTGCAATTCTGGGTGTGGCTGGCATGGGGAAAACTGCACTTGCCAAGGTAGCTTGCCAAGAACCCATTGTGTCAACCATTTTCGACTTTGTTGTGTGGGTTCAAGTGCCTTATGATTTCACTACAGAGACAATAGCAAAAGTCATAATGGAAACTGTTACCAGTGTGTCGCCTGAATACTACAGTTCAAAGTTTCTGCAGCACGCTCTTACGGGCAAAAGGCTTTTGCTTGTTCTGGACGATACCTGGGAAGACGAAAGTGTGAAGAAGTGGGAAGCACTGGTGGCTACTCTCAGTAACTGTAAGAGAGGGAGCAGTATCCTGCTGACAACTCGAATGCAATCAGTGGTTGATATGGCAGCAGAAGCTGTAGGGTCTCCAGCTGAATGTCTGGAACTGGATGAATTGGGAAAAAGTGACAATCTCTTGTTGTTCATGAGTCGGTTGCCTTCTCAAGTGCATTCTGAAGGTTATTCTCATCTTCGGTTGATCGGTGAACAGATAGCTGAAAATACTGGAGGATGCCCACTTGTAACAGAAAAGGTCGCTTCATGGTTGGGATCATGTATGGAGTACCATCATTGGAATGCCGTCCTACAGAAAGGCTGGCAGAAACTGGGACTTAATGCCATTTTTGCAAGTTCTAGGTTGAGCTATGAACGTCTACCTTCAGAACTGCAAATTTGCTTTAGATACTTTAGTATATTTCCAAAGGGATACAAATTTAACAAGGTGGAATTAGCAAACATGTGGATTAGTTCTGGATTGATACCTTTCGGCTTATCGAAACAAGATGATACTGGCTTACAGCATAAGAAGGCTGCCTACCTGTTTAGTGCAGAGGATGTTGGGGAACAATACTTTGCTGCATTAGTAAGGAAATCGTTCTTTTGCCGTTTGCTGGAAACAGACCCTTCTAATGGAAATATGAAAGAATATTATGTCCTGCATAATTTGATGCATGACTGTGCACAGTTTGTTGCACAAAATGAATGCGCAAGAGTAGATGACAATAATTTTCAAGATGTCAGGTGGACAACAGTACACTTGTCTATTGCACATTGTGGCTCTTTAAGAGCAATCCCCCCTATAACAAATTTACGTACTCTTATTATACAAAGTGAATTTTGTCTTGATCAAGAGGCTGAACTTATGCTTGGAGAAGTTCTTCGTAAATCGGCACGCTTGCGTCTGCTATACTTGGATGTGCCATCCCTCTCTAATGCACTTGATGAAATCCCCAGTCTAACACAGCTCCGTTACCTCTTCCTGTTTTCATGTGATAAGTCTCATATTCGAAGTATCCTTAAACTCTGTCATCTGCAAGTGTTCAAGCTCAAATATTTCACAGGTAAACAAGCAGACTTGGATGGCATACGGAACATGCGTTTCTTGCGTTGTCTTCATGTTCCTGACAGTATGTTATCAAAGATACTTAAAATTGGGATGCCAACAACACTTCAGGAGTTACAAGAATTCGAGGTAGCTAAAAATGATGGTCACATGTTGAGTGCATTGAGTACTTTAACAAACCTTAAGCGACTCAGCCTAAGAAACCTCCAAAATGTCAGGAACTGTAAAGACGCAATGGAGATCAAATTAAAGGACAAACCAGACATGATGTTTTTGTCACTATCATGGAACAAACACTCAAATGATCCAGAGGATATAGATCATCAAATCATCGATAACCTAGAACCAAACAAAGGAATTCAGCAGTTGCATGTGTATGGATACAATGGAGTCCAACTTCCGGTTTGGATCGAGAATTCATTTCTCATCCATTTGGTGTCACTTGAGCTTCAATACTGCATGGAATGGAGGACCCTGCCATCATTTAAGGAGCTTAGTTCACTGAAGTATCTAAAGCTGGAACACCTTTTCCAATTAGGCTCGGTGATTGAGGAGCAATCTGGGAGCATAGAATCAGATAATGCATTTCTGCCCCCATTGCTCAATACGCTGATCGTCCGGTGGTGCCCTAACCTGAAGAAACTCCCTGCTTTACCTTGTACCCTTGAGAAATTAATAATAAGGCATGTTGGGCTTGCAGTTCTCCCTAGATTACATCAGGCATATGCTAGCACATGTGAATCATTATCAGTAGATTCACGTCTTTCTCTTTTGCACATTGAAAGTTGTGCACATTTGACTTCTTTGGATGGTCTCCTAGATCAACAGCAACATCTTCAGCACCTCAAGACATTACTCGTGAGACATTGTGCAAAACTATGCCATCTACCGGCAAATGGTTTCACAGAATTACATCACTTGAATTTCCTAGAAATAGTTGCATGCCCAATGCTGAGGAATGTTAAGACTGACAGCAATCTGTTCCCTACATCACTCAATAACTTGGATATCAATCCATGCTGTCATATTGAGGCTTCAGTTCTCATGTCACTGCCAAACCTCACCTATCTCAGAAGGTTATCATTGTTCAGTTGCAGTAGTGTAGAAAAACTTCCATCAGATAAAGTGTTTAGGACACTGAAAAATCTCAATGATATGTTGATAGCCAGATGTGAAAGCTTGTTATCACTGGGTGGGCTTGGAGCTGCTGCCTCCCTGAGAACTCTATCAATCCTGTACTGTGACAAAATCCATTCTTCATCATCTCCACAGGCTGGCTGCTCCTTTATGCTATGGAAGCTCAAAGTTGATCGTGAAGCCATGTTGCTGGTGGAGCCAATAAAGAGCCTCAGGTACACCTTGGAGCTGCATATTGGTGATGATTACGCAATGGATTCCTTGCCAGAGGAGTGGTTGCTTCAGAATGCTTCATCACTCCGTTTGATCGAGATAGGAGTTGCTAAGAATCTGCAGACCCTACCTACTCAGATGGAAAAGTTGGTATCACTACAGAGTTTGCATATCGAAAAAGCCCCTCGAATTCAGTTTCTCCCCAAGCTGCCATTTTCACTTAATAAGCTCACAATCTGGGGCTGTGACCCAAGGTTTCTGAAGCTCTATGAAAGGAATGTTGGTTCAGACTGGGGAAAAATTGAAAACATTGATCATGTGGATATGAAAGCCTACTCTGAAGAAACAAGCGATGATGATGATGATAAGATTCAGCATTTCGATGACAGCATCAGCTATCCTTCCAGCCAATTTATTGTCATAGACTAA
More
|
||||||||||
| Protein seq | MDPVVMEEALDWSFCEPLLTVAISLMDRALFYFGGVKEKEKGSKKRFGGVDKEKILERLGHVRAICDEFRHLVLTNLKIPFSYNLKEIWSFRIDIEGFEHWIEEIEYRGLVGEGRHPTFNILKAKITNKFAKSPDSYAIREGLDHLMRLADIAARIREYLQNDISFHSFRATTPVAVGRGREKEDIEVVSRGREKEEIQVFGREREKEQIVQWLIKQPAKNSESEIFSTDHIRLFAILGVAGMGKTALAKVACQEPIVSTIFDFVVWVQVPYDFTTETIAKVIMETVTSVSPEYYSSKFLQHALTGKRLLLVLDDTWEDESVKKWEALVATLSNCKRGSSILLTTRMQSVVDMAAEAVGSPAECLELDELGKSDNLLLFMSRLPSQVHSEGYSHLRLIGEQIAENTGGCPLVTEKVASWLGSCMEYHHWNAVLQKGWQKLGLNAIFASSRLSYERLPSELQICFRYFSIFPKGYKFNKVELANMWISSGLIPFGLSKQDDTGLQHKKAAYLFSAEDVGEQYFAALVRKSFFCRLLETDPSNGNMKEYYVLHNLMHDCAQFVAQNECARVDDNNFQDVRWTTVHLSIAHCGSLRAIPPITNLRTLIIQSEFCLDQEAELMLGEVLRKSARLRLLYLDVPSLSNALDEIPSLTQLRYLFLFSCDKSHIRSILKLCHLQVFKLKYFTGKQADLDGIRNMRFLRCLHVPDSMLSKILKIGMPTTLQELQEFEVAKNDGHMLSALSTLTNLKRLSLRNLQNVRNCKDAMEIKLKDKPDMMFLSLSWNKHSNDPEDIDHQIIDNLEPNKGIQQLHVYGYNGVQLPVWIENSFLIHLVSLELQYCMEWRTLPSFKELSSLKYLKLEHLFQLGSVIEEQSGSIESDNAFLPPLLNTLIVRWCPNLKKLPALPCTLEKLIIRHVGLAVLPRLHQAYASTCESLSVDSRLSLLHIESCAHLTSLDGLLDQQQHLQHLKTLLVRHCAKLCHLPANGFTELHHLNFLEIVACPMLRNVKTDSNLFPTSLNNLDINPCCHIEASVLMSLPNLTYLRRLSLFSCSSVEKLPSDKVFRTLKNLNDMLIARCESLLSLGGLGAAASLRTLSILYCDKIHSSSSPQAGCSFMLWKLKVDREAMLLVEPIKSLRYTLELHIGDDYAMDSLPEEWLLQNASSLRLIEIGVAKNLQTLPTQMEKLVSLQSLHIEKAPRIQFLPKLPFSLNKLTIWGCDPRFLKLYERNVGSDWGKIENIDHVDMKAYSEETSDDDDDKIQHFDDSISYPSSQFIVID |
||||||||||
| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0264700 | OsMH63_12T0264700.1 | Chr12 | 18615364 | 18619755 | - | maker | ||
| CDS seq | ATGGATCCGGTAGTAATGGAAGAAGCACTGGACTGGTCTTTCTGCGAACCCTTGCTGACAGTTGCCATATCTTTGATGGACAGAGCTTTATTCTACTTTGGTGGTGTCAAGGAGAAGGAGAAGGGGAGCAAGAAAAGATTTGGTGGTGTCGACAAGGAGAAGATATTGGAACGACTCGGACATGTTCGAGCAATATGCGATGAGTTCCGTCATCTGGTTCTGACCAATCTGAAAATTCCGTTCAGCTACAATCTTAAAGAAATCTGGAGTTTCAGGATTGACATTGAGGGGTTCGAGCACTGGATCGAGGAGATCGAATACCGTGGGCTGGTGGGAGAGGGTCGCCACCCGACCTTCAATATTCTCAAGGCAAAGATCACCAACAAGTTTGCGAAATCTCCTGATTCGTATGCCATACGGGAAGGGCTGGATCACCTGATGAGGTTAGCGGATATTGCAGCACGAATACGCGAATATTTACAAAATGATATCTCTTTCCACTCCTTCAGGGCAACCACTCCGGTGGCAGTTGGCCGAGGGAGGGAGAAGGAAGATATAGAGGTGGTTAGCCGAGGGAGAGAGAAGGAAGAGATACAGGTCTTTGGCCGAGAGAGGGAGAAGGAGCAAATAGTGCAGTGGTTGATCAAGCAACCAGCGAAAAACTCTGAGTCTGAGATCTTCAGCACTGATCATATCCGGCTTTTTGCAATTCTGGGTGTGGCTGGCATGGGGAAAACTGCACTTGCCAAGGTAGCTTGCCAAGAACCCATTGTGTCAACCATTTTCGACTTTGTTGTGTGGGTTCAAGTGCCTTATGATTTCACTACAGAGACAATAGCAAAAGTCATAATGGAAACTGTTACCAGTGTGTCGCCTGAATACTACAGTTCAAAGTTTCTGCAGCACGCTCTTACGGGCAAAAGGCTTTTGCTTGTTCTGGACGATACCTGGGAAGACGAAAGTGTGAAGAAGTGGGAAGCACTGGTGGCTACTCTCAGTAACTGTAAGAGAGGGAGCAGTATCCTGCTGACAACTCGAATGCAATCAGTGGTTGATATGGCAGCAGAAGCTGTAGGGTCTCCAGCTGAATGTCTGGAACTGGATGAATTGGGAAAAAGTGACAATCTCTTGTTGTTCATGAGTCGGTTGCCTTCTCAAGTGCATTCTGAAGGTTATTCTCATCTTCGGTTGATCGGTGAACAGATAGCTGAAAATACTGGAGGATGCCCACTTGTAACAGAAAAGGTCGCTTCATGGTTGGGATCATGTATGGAGTACCATCATTGGAATGCCGTCCTACAGAAAGGCTGGCAGAAACTGGGACTTAATGCCATTTTTGCAAGTTCTAGGTTGAGCTATGAACGTCTACCTTCAGAACTGCAAATTTGCTTTAGATACTTTAGTATATTTCCAAAGGGATACAAATTTAACAAGGTGGAATTAGCAAACATGTGGATTAGTTCTGGATTGATACCTTTCGGCTTATCGAAACAAGATGATACTGGCTTACAGCATAAGAAGGCTGCCTACCTGTTTAGTGCAGAGGATGTTGGGGAACAATACTTTGCTGCATTAGTAAGGAAATCGTTCTTTTGCCGTTTGCTGGAAACAGACCCTTCTAATGGAAATATGAAAGAATATTATGTCCTGCATAATTTGATGCATGACTGTGCACAGTTTGTTGCACAAAATGAATGCGCAAGAGTAGATGACAATAATTTTCAAGATGTCAGGTGGACAACAGTACACTTGTCTATTGCACATTGTGGCTCTTTAAGAGCAATCCCCCCTATAACAAATTTACGTACTCTTATTATACAAAGTGAATTTTGTCTTGATCAAGAGGCTGAACTTATGCTTGGAGAAGTTCTTCGTAAATCGGCACGCTTGCGTCTGCTATACTTGGATGTGCCATCCCTCTCTAATGCACTTGATGAAATCCCCAGTCTAACACAGCTCCGTTACCTCTTCCTGTTTTCATGTGATAAGTCTCATATTCGAAGTATCCTTAAACTCTGTCATCTGCAAGTGTTCAAGCTCAAATATTTCACAGGTAAACAAGCAGACTTGGATGGCATACGGAACATGCGTTTCTTGCGTTGTCTTCATGTTCCTGACAGTATGTTATCAAAGATACTTAAAATTGGGATGCCAACAACACTTCAGGAGTTACAAGAATTCGAGGTAGCTAAAAATGATGGTCACATGTTGAGTGCATTGAGTACTTTAACAAACCTTAAGCGACTCAGCCTAAGAAACCTCCAAAATGTCAGGAACTGTAAAGACGCAATGGAGATCAAATTAAAGGACAAACCAGACATGATGTTTTTGTCACTATCATGGAACAAACACTCAAATGATCCAGAGGATATAGATCATCAAATCATCGATAACCTAGAACCAAACAAAGGAATTCAGCAGTTGCATGTGTATGGATACAATGGAGTCCAACTTCCGGTTTGGATCGAGAATTCATTTCTCATCCATTTGGTGTCACTTGAGCTTCAATACTGCATGGAATGGAGGACCCTGCCATCATTTAAGGAGCTTAGTTCACTGAAGTATCTAAAGCTGGAACACCTTTTCCAATTAGGCTCGGTGATTGAGGAGCAATCTGGGAGCATAGAATCAGATAATGCATTTCTGCCCCCATTGCTCAATACGCTGATCGTCCGGTGGTGCCCTAACCTGAAGAAACTCCCTGCTTTACCTTGTACCCTTGAGAAATTAATAATAAGGCATGTTGGGCTTGCAGTTCTCCCTAGATTACATCAGGCATATGCTAGCACATGTGAATCATTATCAGTAGATTCACGTCTTTCTCTTTTGCACATTGAAAGTTGTGCACATTTGACTTCTTTGGATGGTCTCCTAGATCAACAGCAACATCTTCAGCACCTCAAGACATTACTCGTGAGACATTGTGCAAAACTATGCCATCTACCGGCAAATGGTTTCACAGAATTACATCACTTGAATTTCCTAGAAATAGTTGCATGCCCAATGCTGAGGAATGTTAAGACTGACAGCAATCTGTTCCCTACATCACTCAATAACTTGGATATCAATCCATGCTGTCATATTGAGGCTTCAGTTCTCATGTCACTGCCAAACCTCACCTATCTCAGAAGGTTATCATTGTTCAGTTGCAGTAGTGTAGAAAAACTTCCATCAGATAAAGTGTTTAGGACACTGAAAAATCTCAATGATATGTTGATAGCCAGATGTGAAAGCTTGTTATCACTGGGTGGGCTTGGAGCTGCTGCCTCCCTGAGAACTCTATCAATCCTGTACTGTGACAAAATCCATTCTTCATCATCTCCACAGGCTGGCTGCTCCTTTATGCTATGGAAGCTCAAAGTTGATCGTGAAGCCATGTTGCTGGTGGAGCCAATAAAGAGCCTCAGGTACACCTTGGAGCTGCATATTGGTGATGATTACGCAATGGATTCCTTGCCAGAGGAGTGGTTGCTTCAGAATGCTTCATCACTCCGTTTGATCGAGATAGGAGTTGCTAAGAATCTGCAGACCCTACCTACTCAGATGGAAAAGTTGGTATCACTACAGAGTTTGCATATCGAAAAAGCCCCTCGAATTCAGTTTCTCCCCAAGCTGCCATTTTCACTTAATAAGCTCACAATCTGGGGCTGTGACCCAAGGTTTCTGAAGCTCTATGAAAGGAATGTTGGTTCAGACTGGGGAAAAATTGAAAACATTGATCATGTGGATATGAAAGCCTACTCTGAAGAAACAAGCGATGATGATGATGATAAGATTCAGCATTTCGATGACAGCATCAGCTATCCTTCCAGCCAATTTATTGTCATAGACTAA
More
|
|||||||
| Protein seq | MDPVVMEEALDWSFCEPLLTVAISLMDRALFYFGGVKEKEKGSKKRFGGVDKEKILERLGHVRAICDEFRHLVLTNLKIPFSYNLKEIWSFRIDIEGFEHWIEEIEYRGLVGEGRHPTFNILKAKITNKFAKSPDSYAIREGLDHLMRLADIAARIREYLQNDISFHSFRATTPVAVGRGREKEDIEVVSRGREKEEIQVFGREREKEQIVQWLIKQPAKNSESEIFSTDHIRLFAILGVAGMGKTALAKVACQEPIVSTIFDFVVWVQVPYDFTTETIAKVIMETVTSVSPEYYSSKFLQHALTGKRLLLVLDDTWEDESVKKWEALVATLSNCKRGSSILLTTRMQSVVDMAAEAVGSPAECLELDELGKSDNLLLFMSRLPSQVHSEGYSHLRLIGEQIAENTGGCPLVTEKVASWLGSCMEYHHWNAVLQKGWQKLGLNAIFASSRLSYERLPSELQICFRYFSIFPKGYKFNKVELANMWISSGLIPFGLSKQDDTGLQHKKAAYLFSAEDVGEQYFAALVRKSFFCRLLETDPSNGNMKEYYVLHNLMHDCAQFVAQNECARVDDNNFQDVRWTTVHLSIAHCGSLRAIPPITNLRTLIIQSEFCLDQEAELMLGEVLRKSARLRLLYLDVPSLSNALDEIPSLTQLRYLFLFSCDKSHIRSILKLCHLQVFKLKYFTGKQADLDGIRNMRFLRCLHVPDSMLSKILKIGMPTTLQELQEFEVAKNDGHMLSALSTLTNLKRLSLRNLQNVRNCKDAMEIKLKDKPDMMFLSLSWNKHSNDPEDIDHQIIDNLEPNKGIQQLHVYGYNGVQLPVWIENSFLIHLVSLELQYCMEWRTLPSFKELSSLKYLKLEHLFQLGSVIEEQSGSIESDNAFLPPLLNTLIVRWCPNLKKLPALPCTLEKLIIRHVGLAVLPRLHQAYASTCESLSVDSRLSLLHIESCAHLTSLDGLLDQQQHLQHLKTLLVRHCAKLCHLPANGFTELHHLNFLEIVACPMLRNVKTDSNLFPTSLNNLDINPCCHIEASVLMSLPNLTYLRRLSLFSCSSVEKLPSDKVFRTLKNLNDMLIARCESLLSLGGLGAAASLRTLSILYCDKIHSSSSPQAGCSFMLWKLKVDREAMLLVEPIKSLRYTLELHIGDDYAMDSLPEEWLLQNASSLRLIEIGVAKNLQTLPTQMEKLVSLQSLHIEKAPRIQFLPKLPFSLNKLTIWGCDPRFLKLYERNVGSDWGKIENIDHVDMKAYSEETSDDDDDKIQHFDDSISYPSSQFIVID
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.029266 | 10.6577315 | 7.51043 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0511400 | RBH | 0.873811 | 1.276093 | 1.223264 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g32660 | RBH | 0.740927 | 0.400170 | 0.286959 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0511400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0014930 | RBH | 0.374734 | 6.495183 | 5.058962 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0015070 | RBH | 0.193720 | 0.506310 | 1.777087 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0014970 | RBH | 0.903781 | 6.196531 | 8.238596 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0014780 | RBH | 0.106181 | 0.121842 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0014320 | RBH | 3.381577 | 9.108010 | 12.210627 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0264900 | RBH | 0.0695325 | 0.2333155 | 0.293939 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0014530 | RBH | 0.200222 | 0.186121 | 1.124020 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0294400 | RBH | 4.5505235 | 12.2714285 | 10.3047705 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0014670 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0014860 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0014820 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0014720 | RBH | 0.717692 | 0.0 | 0.480575 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0014880 | RBH | 0.107623 | 1.279766 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G014780 | RBH | 0.0 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0014560 | RBH | 0.000000 | 0.000000 | 0.000000 |
