Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0140300 | OGI:07033710 | 13/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:9147890-9151831 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATCTCTCCTCCTGTATGAAGGATACGAGTCCTTCCCTTGTTGTGTTGCTTGACAGAACGGTCGAGGAAAGTTGAAGCGACTCTCCATCCACCATGCAGGCACACTTTTTGTTTAGCTCACCGCACGGCCCGTGCAACATATGTTTTATGACCAGTCGATGTAGCACGGGGTATTTTTCCTTATCTGGTATCTCTGCACATATAACTTTATCATAACCATCTGGATTTGTTAACTTACTGGCTGGCTTCATGATTAATAGGATATGTTCATGTGGGAGGCCCCGCTTCTGAAACTCAGTAACATGAGCATATGCCTGAACCTCACCGAAATACTTTTTTTTGGTGAACAAGTCTAACATGTCTCTTAGCTTGGCCCTAAATACCCTTGCAACAAGGTCCGGTCGATCTTGCGGTTGTTGGCCAGGATAGAGATTTTCTGTTATCTCCTCCCAGTTTGGATTGCAGGTCATCGTGATGAAGTAGTCTGGTCTCCCAAAACGTTGGACAAGAGCCATTGCATTAAGAAACCGCCGCTGCATGTCGCGATCGCCACCAGGAAAAGACCGAGGTAGCACAATCCTCTTTCCTACCTCTTTACCCCTTGTCTCTCCAGAATTGATCACGTCGACGACACCCTACCAAATTAATATCGATAACGTGAGCATATATTGGAAGCATCGATTTTTGAATGGGATATGGTTTAATATTATTGAATATGTATTTTATTTCATATACTCACCTGGTACAGCTCAGCTCGTATCTTCTTTTGGTTCTCAGGGTTAGAATACCAATCCAGTCGCATAGACTATCTTAATGTACATGTCAACGGCCCATTGCTGAAAGAGACGACCTCCAAATAAAATAATGTTGAAAAGTCCCCTCCGAACCTGTAGCCTAAAGCAATAGTACTCTCTTGCAGTGACAAATCTATCTTTCTTCCGCTTGCATGACCTGTTATCCACCTCATTAGTGTCTTCATCGTATAAAGTATCGCCAACGTCATCATTCTCTGCAACAAAAATCAAGAAATATACTTAATTACAATGGCCTAAAAGTATGTATGTATCGATAAGGTCTCATACAAGCTAAGTGTGTACACACCACGAAGCTCGCCAAAAGTGTTTTCTTCACTGACGTGCACATTACCATCCATTGGTGCAGCACTTGGTGCATCAATGTCCATACCGTCTGGAATATTGTTGGGTGTTTCGTACGGCATTTTGACATTCCATCCGGTTTCGCCGTTAGGGTTAAATAAAGGATACGCCAACAGGTCATAGCAGCCATGGTATGCTTTGATATAGCTAGGTTTCTCCCCTTTGGCATGCACCATCACATGCCTATCAAAAGTTCTAACCGGATCATCCCCTTCTAGCCAGATAGCAGGAACTTGGGATGTTGTAGGAGCATTATATCTTCGTTGGTCAGGGGTGACATTCGTGTTGATCTCAAGATTTGGCATGGTACCGACTCGGTTAAAAGTCTCAACATATGGGTTATCCGCCAAGATTTTTAGGATGATTCGCACAAGGTTGATATCAAGATCAGGGGACCTCTTCGCTCTGTGTGCAAGATCAGTGTCTTCTTCCGTATCATAGAAGTACAACTGCATATGACATGGACCATGAGAACCTGGCACCAAATTATCTAAACGATGGTACAATGCACCATGCACTCGAAATGTATATACACCGGTGCCTGCAGCAGTGCTCACGCTGCGGTCAAGGGTCACTCCAAGACTTGTGAATGAGAAATGAGAGTTGAAGTAACGGATATGTTTTCTAAAGTATTTCGCATCATTATCAACCTGGCTTGTAAACAGGCGTACCAACTTAGGGGGAACCAATGGAGTGGCTACGGTTATCTTCCCTTGCCTGCAGCAGAATCCAGGGGGCTCGTACTGAAACCTAATCGCCCCACAGTACTTGCAATCAGCCTTTTTTTTAACACATGATGTTTCTCTGGCAGGTTATGATAAACATAATCGTATGGATCTTCAACATCAACAGAATTAACACCCTTGATATCCACGCGATATGACTCGTAACCATTGTCTGAGAGAGGGAAAATAAGCACAGAATTAAAATATGATCATATATACCTACTTGTCTTGAAAAGAGAAAAGTATTATTATACTTTATGATACCTTTATTTTGAAATTCCTCATCATCACTATCCACGACGTCACATGTCTGCGTCAGTTTGACATTACCTGATGGAAGGTGGATTAGTACTGATAATATCGTATAGTTGTTGGGTTAATATATTGTGTAGTGAAATTGTTCATAAAACACCTCCAGCATTAATTAAAACAAATTAAGAATGCTCACTTTCGTCGTCTAAATTGTTTAGTGCAGGCTCGAATATTCTACTATCGAATTCAATGTAATCGAAACTCGGAATGTCCTGATGAACATCTTGGACAGGTATACTTTCGTATGCTGTAACTCCATCTGCTCAATCAATATTTCATGAAATAATAAATCAAGAAGAATATGAAATATTGATTTATGCATTGAATTTTATGGAGGGAGTTTACCTAGCATGGGTGAGTGTTGGTCACGTTCAATGCTCACTGCTTTCCTCTTCCTACATTGTCTTTGGTAGGTATCATTTCTGTGAAGCCAATCCTTCGGATCATCTGGATCAACATCTTCCTTGTATAATACGCTTGTAGCTTGCAAAATGGTAGAAGATGTCGTTCCATATGGCGACACTAAATGAAAAAATAGTGAGAACAATAGATTAAAACAAAAAGTTGATTCTGACAGTAAGTTATACCATCTTGATTGGTTAATTCAGAATTTGATCCGCTAACAATGCTTGACTCCGCCTTCTTCCTCGCACGGTATTCACGCTGCTTTCTGTTCCTTTCCACATTTGCTGGTTGTACTGCTGTTAAAGAGATCACGCTCCCAGGATCCCCATCTTCGTTGTATAGTACGCTTGTTGCTTGCAAAACGATATAAGATGTCGTTGAATATGGTGATACAAAATGAATAAAAATGTGATCGGTTGATTAGTCACGGGCATAAATTTTACCAATATGATCGGTTGATTGGGAATTTGATCCCCTAACAATGTCTGACTTGGCCTTCTTCCTCGCACGGTATTCGCGTTGCTTTCTGTTCCTTTCCTCATTTGCTGGTTGTACTGGTGTTAAAGAGGTCACACTACCATCAAGATTAGTTGACCCAACCTTCTTCTTTTGGCGATATTCACGTTGCTTACGGTTCCTTTCCTCTCTGGCATCATTGGTAGCTTCAGCCAGCTGGGCATTGACAATTTCAAATTCCTTAGAAAGAGAAGCAGTAGTTGGTTGCCGCAGTGTTGCAGAACACGGGGTATTTGCTGCAGCCTTTTTCCTTGCACGGTATTCACGTTGGCTTCGGTTATGTGCTTCCCGCTTACGTAATACCTCATCAGAAGGTGTTATAGGTGTCGTTTGCAATACATCCAATCTGTTGGTGATATCCCGGAATGCAATACGCTCTTCAGTTTGTGGGTTCGTTGCGTCAACACCTAATATACGTATTTTTACATTAGTGGTTAATCATGGCTTTTATAATAGTGCCATAACCATACATTGCAATGTTTTAAGCATGTATTATGGCGAAAATGCCCAGTACAATAAAGCGATTATGAAATCGTGTGCAGGGTCAAACAAAGATATGACATACACAAGTTGTCTCCCATGCAAATATAAACATCTCAAGTTACTTGTCAGCGTGATGCGCATAAGGTACAATCATCACCAATCAGTCATCAATGCATAATTAATGTGTTGAACAACCAATGACATATACATCTGAATGAGCCCTTATCCAGTTCTTTGGAGATATTCACACGGGATGATTATGTTATCCAGTATTCCATCTTAGTCAGTTAGCAAATTTGAGAAAAAACAAATTAATGTCTCACCCATATTCTCCATTATGCCT
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| CDS seq | ATGGAGAATATGGGTGTTGACGCAACGAACCCACAAACTGAAGAGCGTATTGCATTCCGGGATATCACCAACAGATTGGATGTATTGCAAACGACACCTATAACACCTTCTGATGAGGTATTACGTAAGCGGGAAGCACATAACCGAAGCCAACGTGAATACCGTGCAAGGAAAAAGGCTGCAGCAAATACCCCGTGTTCTGCAACACTGCGGCAACCAACTACTGCTTCTCTTTCTAAGGAATTTGAAATTGTCAATGCCCAGCTGGCTGAAGCTACCAATGATGCCAGAGAGGAAAGGAACCGTAAGCAACGTGAATATCGCCAAAAGAAGAAGGTTGGGTCAACTAATCTTGATGGTAGTGTGACCTCTTTAACACCAGTACAACCAGCAAATGAGGAAAGGAACAGAAAGCAACGCGAATACCGTGCGAGGAAGAAGGCCAAGTCAGACATTGTTAGGGGATCAAATTCCCAATCAACCGATCATATTGCAACAAGCGTACTATACAACGAAGATGGGGATCCTGGGAGCGTGATCTCTTTAACAGCAGTACAACCAGCAAATGTGGAAAGGAACAGAAAGCAGCGTGAATACCGTGCGAGGAAGAAGGCGGAGTCAAGCATTGTTAGCGGATCAAATTCTGAATTAACCAATCAAGATGTGTCGCCATATGGAACGACATCTTCTACCATTTTGCAAGCTACAAGCGTATTATACAAGGAAGATGTTGATCCAGATGATCCGAAGGATTGGCTTCACAGAAATGATACCTACCAAAGACAATGTAGGAAGAGGAAAGCAGTGAGCATTGAACGTGACCAACACTCACCCATGCTAGATGGAGTTACAGCATACGAAAGTATACCTGTCCAAGATGTTCATCAGGACATTCCGAGTTTCGATTACATTGAATTCGATAGTAGAATATTCGAGCCTGCACTAAACAATTTAGACGACGAAAGTAATGTCAAACTGACGCAGACATGTGACGTCGTGGATAGTGATGATGAGGAATTTCAAAATAAAGACAATGGTTACGAGTCATATCGCGTGGATATCAAGGGTGTTAATTCTGTTGATGTTGAAGATCCATACGATTATGTTTATCATAACCTGCCAGAGAAACATCATTTGTACTTCTATGATACGGAAGAAGACACTGATCTTGCACACAGAGCGAAGAGGTCCCCTGATCTTGATATCAACCTTGTGCGAATCATCCTAAAAATCTTGGCGGATAACCCATATGTTGAGACTTTTAACCGAGTCGGTACCATGCCAAATCTTGAGATCAACACGAATGTCACCCCTGACCAACGAAGATATAATGCTCCTACAACATCCCAAGTTCCTGCTATCTGGCTAGAAGGGGATGATCCGGTTAGAACTTTTGATAGGCATGTGATGGTGCATGCCAAAGGGGAGAAACCTAGCTATATCAAAGCATACCATGGCTGCTATGACCTGTTGGCGTATCCTTTATTTAACCCTAACGGCGAAACCGGATGGAATGTCAAAATGCCGTACGAAACACCCAACAATATTCCAGACGGTATGGACATTGATGCACCAAGTGCTGCACCAATGGATGGTAATGTGCACGTCAGTGAAGAAAACACTTTTGGCGAGCTTCGTGAGAATGATGACGTTGGCGATACTTTATACGATGAAGACACTAATGAGGTGGATAACAGGTCATGCAAGCGGAAGAAAGATAGATTTGTCACTGCAAGAGAGTACTATTGCTTTAGGCTACAGGGTGTCGTCGACGTGATCAATTCTGGAGAGACAAGGGGTAAAGAGGTAGGAAAGAGGATTGTGCTACCTCGGTCTTTTCCTGGTGGCGATCGCGACATGCAGCGGCGGTTTCTTAATGCAATGGCTCTTGTCCAACGTTTTGGGAGACCAGACTACTTCATCACGATGACCTGCAATCCAAACTGGGAGGAGATAACAGAAAATCTCTATCCTGGCCAACAACCGCAAGATCGACCGGACCTTGTTGCAAGGGTATTTAGGGCCAAGCTAAGAGACATGTTAGACTTGTTCACCAAAAAAAAGTATTTCGGTGAGGTTCAGGCATATGCTCATGTTACTGAGTTTCAGAAGCGGGGCCTCCCACATGAACATATCCTATTAATCATGAAGCCAGCCAGTAAGTTAACAAATCCAGATGGTTATGATAAAGTTATATGTGCAGAGATACCAGATAAGGAAAAATACCCCGTGCTACATCGACTGGTCATAAAACATATGTTGCACGGGCCGTGCGGTGAGCTAAACAAAAAGTGTGCCTGCATGGTGGATGGAGAGTCGCTTCAACTTTCCTCGACCGTTCTGTCAAGCAACACAACAAGGGAAGGACTCGTATCCTTCATACAGGAGGAGAGATGA
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| Protein seq | MENMGVDATNPQTEERIAFRDITNRLDVLQTTPITPSDEVLRKREAHNRSQREYRARKKAAANTPCSATLRQPTTASLSKEFEIVNAQLAEATNDAREERNRKQREYRQKKKVGSTNLDGSVTSLTPVQPANEERNRKQREYRARKKAKSDIVRGSNSQSTDHIATSVLYNEDGDPGSVISLTAVQPANVERNRKQREYRARKKAESSIVSGSNSELTNQDVSPYGTTSSTILQATSVLYKEDVDPDDPKDWLHRNDTYQRQCRKRKAVSIERDQHSPMLDGVTAYESIPVQDVHQDIPSFDYIEFDSRIFEPALNNLDDESNVKLTQTCDVVDSDDEEFQNKDNGYESYRVDIKGVNSVDVEDPYDYVYHNLPEKHHLYFYDTEEDTDLAHRAKRSPDLDINLVRIILKILADNPYVETFNRVGTMPNLEINTNVTPDQRRYNAPTTSQVPAIWLEGDDPVRTFDRHVMVHAKGEKPSYIKAYHGCYDLLAYPLFNPNGETGWNVKMPYETPNNIPDGMDIDAPSAAPMDGNVHVSEENTFGELRENDDVGDTLYDEDTNEVDNRSCKRKKDRFVTAREYYCFRLQGVVDVINSGETRGKEVGKRIVLPRSFPGGDRDMQRRFLNAMALVQRFGRPDYFITMTCNPNWEEITENLYPGQQPQDRPDLVARVFRAKLRDMLDLFTKKKYFGEVQAYAHVTEFQKRGLPHEHILLIMKPASKLTNPDGYDKVICAEIPDKEKYPVLHRLVIKHMLHGPCGELNKKCACMVDGESLQLSSTVLSSNTTREGLVSFIQEER |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0140300 | OsMH63_12T0140300.1 | Chr12 | 9147890 | 9151831 | - | maker | ||
| CDS seq | ATGGAGAATATGGGTGTTGACGCAACGAACCCACAAACTGAAGAGCGTATTGCATTCCGGGATATCACCAACAGATTGGATGTATTGCAAACGACACCTATAACACCTTCTGATGAGGTATTACGTAAGCGGGAAGCACATAACCGAAGCCAACGTGAATACCGTGCAAGGAAAAAGGCTGCAGCAAATACCCCGTGTTCTGCAACACTGCGGCAACCAACTACTGCTTCTCTTTCTAAGGAATTTGAAATTGTCAATGCCCAGCTGGCTGAAGCTACCAATGATGCCAGAGAGGAAAGGAACCGTAAGCAACGTGAATATCGCCAAAAGAAGAAGGTTGGGTCAACTAATCTTGATGGTAGTGTGACCTCTTTAACACCAGTACAACCAGCAAATGAGGAAAGGAACAGAAAGCAACGCGAATACCGTGCGAGGAAGAAGGCCAAGTCAGACATTGTTAGGGGATCAAATTCCCAATCAACCGATCATATTGCAACAAGCGTACTATACAACGAAGATGGGGATCCTGGGAGCGTGATCTCTTTAACAGCAGTACAACCAGCAAATGTGGAAAGGAACAGAAAGCAGCGTGAATACCGTGCGAGGAAGAAGGCGGAGTCAAGCATTGTTAGCGGATCAAATTCTGAATTAACCAATCAAGATGTGTCGCCATATGGAACGACATCTTCTACCATTTTGCAAGCTACAAGCGTATTATACAAGGAAGATGTTGATCCAGATGATCCGAAGGATTGGCTTCACAGAAATGATACCTACCAAAGACAATGTAGGAAGAGGAAAGCAGTGAGCATTGAACGTGACCAACACTCACCCATGCTAGATGGAGTTACAGCATACGAAAGTATACCTGTCCAAGATGTTCATCAGGACATTCCGAGTTTCGATTACATTGAATTCGATAGTAGAATATTCGAGCCTGCACTAAACAATTTAGACGACGAAAGTAATGTCAAACTGACGCAGACATGTGACGTCGTGGATAGTGATGATGAGGAATTTCAAAATAAAGACAATGGTTACGAGTCATATCGCGTGGATATCAAGGGTGTTAATTCTGTTGATGTTGAAGATCCATACGATTATGTTTATCATAACCTGCCAGAGAAACATCATTTGTACTTCTATGATACGGAAGAAGACACTGATCTTGCACACAGAGCGAAGAGGTCCCCTGATCTTGATATCAACCTTGTGCGAATCATCCTAAAAATCTTGGCGGATAACCCATATGTTGAGACTTTTAACCGAGTCGGTACCATGCCAAATCTTGAGATCAACACGAATGTCACCCCTGACCAACGAAGATATAATGCTCCTACAACATCCCAAGTTCCTGCTATCTGGCTAGAAGGGGATGATCCGGTTAGAACTTTTGATAGGCATGTGATGGTGCATGCCAAAGGGGAGAAACCTAGCTATATCAAAGCATACCATGGCTGCTATGACCTGTTGGCGTATCCTTTATTTAACCCTAACGGCGAAACCGGATGGAATGTCAAAATGCCGTACGAAACACCCAACAATATTCCAGACGGTATGGACATTGATGCACCAAGTGCTGCACCAATGGATGGTAATGTGCACGTCAGTGAAGAAAACACTTTTGGCGAGCTTCGTGAGAATGATGACGTTGGCGATACTTTATACGATGAAGACACTAATGAGGTGGATAACAGGTCATGCAAGCGGAAGAAAGATAGATTTGTCACTGCAAGAGAGTACTATTGCTTTAGGCTACAGGGTGTCGTCGACGTGATCAATTCTGGAGAGACAAGGGGTAAAGAGGTAGGAAAGAGGATTGTGCTACCTCGGTCTTTTCCTGGTGGCGATCGCGACATGCAGCGGCGGTTTCTTAATGCAATGGCTCTTGTCCAACGTTTTGGGAGACCAGACTACTTCATCACGATGACCTGCAATCCAAACTGGGAGGAGATAACAGAAAATCTCTATCCTGGCCAACAACCGCAAGATCGACCGGACCTTGTTGCAAGGGTATTTAGGGCCAAGCTAAGAGACATGTTAGACTTGTTCACCAAAAAAAAGTATTTCGGTGAGGTTCAGGCATATGCTCATGTTACTGAGTTTCAGAAGCGGGGCCTCCCACATGAACATATCCTATTAATCATGAAGCCAGCCAGTAAGTTAACAAATCCAGATGGTTATGATAAAGTTATATGTGCAGAGATACCAGATAAGGAAAAATACCCCGTGCTACATCGACTGGTCATAAAACATATGTTGCACGGGCCGTGCGGTGAGCTAAACAAAAAGTGTGCCTGCATGGTGGATGGAGAGTCGCTTCAACTTTCCTCGACCGTTCTGTCAAGCAACACAACAAGGGAAGGACTCGTATCCTTCATACAGGAGGAGAGATGA
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| Protein seq | MENMGVDATNPQTEERIAFRDITNRLDVLQTTPITPSDEVLRKREAHNRSQREYRARKKAAANTPCSATLRQPTTASLSKEFEIVNAQLAEATNDAREERNRKQREYRQKKKVGSTNLDGSVTSLTPVQPANEERNRKQREYRARKKAKSDIVRGSNSQSTDHIATSVLYNEDGDPGSVISLTAVQPANVERNRKQREYRARKKAESSIVSGSNSELTNQDVSPYGTTSSTILQATSVLYKEDVDPDDPKDWLHRNDTYQRQCRKRKAVSIERDQHSPMLDGVTAYESIPVQDVHQDIPSFDYIEFDSRIFEPALNNLDDESNVKLTQTCDVVDSDDEEFQNKDNGYESYRVDIKGVNSVDVEDPYDYVYHNLPEKHHLYFYDTEEDTDLAHRAKRSPDLDINLVRIILKILADNPYVETFNRVGTMPNLEINTNVTPDQRRYNAPTTSQVPAIWLEGDDPVRTFDRHVMVHAKGEKPSYIKAYHGCYDLLAYPLFNPNGETGWNVKMPYETPNNIPDGMDIDAPSAAPMDGNVHVSEENTFGELRENDDVGDTLYDEDTNEVDNRSCKRKKDRFVTAREYYCFRLQGVVDVINSGETRGKEVGKRIVLPRSFPGGDRDMQRRFLNAMALVQRFGRPDYFITMTCNPNWEEITENLYPGQQPQDRPDLVARVFRAKLRDMLDLFTKKKYFGEVQAYAHVTEFQKRGLPHEHILLIMKPASKLTNPDGYDKVICAEIPDKEKYPVLHRLVIKHMLHGPCGELNKKCACMVDGESLQLSSTVLSSNTTREGLVSFIQEER
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0282855 | 0.058653 | 0.036385 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g17690 | RBH | 0.000000 | 0.005921 | 0.002635 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0013090 | SBH | 0.817565 | 0.000000 | 5.003784 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0013130 | RBH | 0.578091 | 5.543185 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
