Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0025300 | OGI:12004160 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:1474760-1475625 | ||||||||
| Gene Symbol | DLN251, OsDLN251 | ||||||||||
| DNA seq | ATGCACACATGGCCTATTTTTTGTGCCAAAACTTGCCACAAACAACTTAGGTATGGTTTGGTAAGAATTAGTCTATGACATAGTACCATAAGTGTATCATGTCAACACTCAACAGTTATGATAGTGAATAAGACACTCATCACCTACTACTATAATTTAAGAAAATCGTTAAACGAGTAATCGTTATTTCCTCATATTTTCTCTTTCCGCCTTCCAGTTCCTGGATCCAGGTGACCAGGTCGGACAGCTGCGGTCAACGCAAACAACGAGTAAACGCAAGGCTGCAAGCAGAAAGGGTCAACGCGAACAACGAGTAAACGCAAGGCTGCAAGAAGAAAGGCGCAAGGTACGAGCCGTGCCGCGAGCAGCGGTGTGCGCTAGACGGAGCAGTGCAGCCACGGTAGACGTGCAGGCTGCATCGACAAAGGGCGGTCATCGGTGCTGCTCAAGGAGTAGCAGCAGGACCTCCAGGTAGCCGCGACCGTCGAAAGCATCAGCAGATCCCAAAATCAGTATGTGCCCTTCAATCTATCCTCAGCTCAGCTTTCTCGATGTGGATTCGTCCTCCAAATTCTTCTCTTGCCCTTAGCAAAATTGTCCATTTTATGTGTAATGAATCTGTGCTAAGATCTATGGATTCATTCTCCAATTCTCTGTGCTATTTCATTCTTTGTCCATGTCTTCGCGGTGAATAATCGGTGAAAAGTGGGCTCGAGTATGTCACAGCGAATCTCGGGAACTTCGTCCCGAAACGAGGCTTGACAATGTACCGATCGCAGCCGGATCTTGTCTGGTATAAGGCGGACGAGCGCCTCTATTGCTCCCTCACTGCGCCGCCGCCGTCGTCGTGTGAGGAGGATGGATGA
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| CDS seq | ATGCACACATGGCCTATTTTTTGTGCCAAAACTTGCCACAAACAACTTAGGTATGGTTTGTTCCTGGATCCAGGTGACCAGGTCGGACAGCTGCGGTCAACGCAAACAACGAGTAAACGCAAGGCTGCAAGCAGAAAGGGTCAACGCGAACAACGAGTAAACGCAAGGCTGCAAGAAGAAAGGCGCAAGGTACGAGCCGTGCCGCGAGCAGCGGTGTGCGCTAGACGGAGCAGTGCAGCCACGGTAGACGTGCAGGCTGCATCGACAAAGGGCGGTCATCGGTGCTGCTCAAGGAGTAGCAGCAGGACCTCCAGTGGGCTCGAGTATGTCACAGCGAATCTCGGGAACTTCGTCCCGAAACGAGGCTTGACAATGTACCGATCGCAGCCGGATCTTGTCTGGTATAAGGCGGACGAGCGCCTCTATTGCTCCCTCACTGCGCCGCCGCCGTCGTCGTGTGAGGAGGATGGATGA
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| Protein seq | MHTWPIFCAKTCHKQLRYGLFLDPGDQVGQLRSTQTTSKRKAASRKGQREQRVNARLQEERRKVRAVPRAAVCARRSSAATVDVQAASTKGGHRCCSRSSSRTSSGLEYVTANLGNFVPKRGLTMYRSQPDLVWYKADERLYCSLTAPPPSSCEEDG |
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| Function | Putative zinc finger CCCH domain-containing protein 64 [UniProtKB/Swiss-Prot:A3CEM4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0025300 | OsMH63_12T0025300.1 | Chr12 | 1474760 | 1475625 | + | maker | ||
| CDS seq | ATGCACACATGGCCTATTTTTTGTGCCAAAACTTGCCACAAACAACTTAGGTATGGTTTGTTCCTGGATCCAGGTGACCAGGTCGGACAGCTGCGGTCAACGCAAACAACGAGTAAACGCAAGGCTGCAAGCAGAAAGGGTCAACGCGAACAACGAGTAAACGCAAGGCTGCAAGAAGAAAGGCGCAAGGTACGAGCCGTGCCGCGAGCAGCGGTGTGCGCTAGACGGAGCAGTGCAGCCACGGTAGACGTGCAGGCTGCATCGACAAAGGGCGGTCATCGGTGCTGCTCAAGGAGTAGCAGCAGGACCTCCAGTGGGCTCGAGTATGTCACAGCGAATCTCGGGAACTTCGTCCCGAAACGAGGCTTGACAATGTACCGATCGCAGCCGGATCTTGTCTGGTATAAGGCGGACGAGCGCCTCTATTGCTCCCTCACTGCGCCGCCGCCGTCGTCGTGTGAGGAGGATGGATGA
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| Protein seq | MHTWPIFCAKTCHKQLRYGLFLDPGDQVGQLRSTQTTSKRKAASRKGQREQRVNARLQEERRKVRAVPRAAVCARRSSAATVDVQAASTKGGHRCCSRSSSRTSSGLEYVTANLGNFVPKRGLTMYRSQPDLVWYKADERLYCSLTAPPPSSCEEDG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0129550 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g03554 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0129550 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
