Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsMH63_12G0015000 | OGI:12002710 | 13/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:949523-955789 | ||||||||
Gene Symbol | WRKY104, OsWRKY104, OsWRKY89, WRKY95, OsWRKY95 | ||||||||||
DNA seq | CGGTAAAAAAAGAAGAAGAAAGAACGCGACTCTTCTCGTCTTCACGCCGCCTCCGCTCCTGAGGCCCAGCCGCCGCGCGCCGCCTCTTCTCCCAAGCCGCCGCTACCTCCCCCTCTAGTCCTCTCCGTCTCCATTGCCGGCGTTACTCATCCCCTCATCACCGCGGCTCCATCCCACCCCTGCCGCCGCCGTATACCCCACCGGCACCGGCGCATCACATCCACCTCTAATCTCCCGCTACCCTGAAGAAGGGGGGAAAGGGATGACAGATGAATAGCGATGGCGAGGAGGAGGGTATCCGCAGGAGCTGCGTCCACACCTATTCACCAAATCGGTATCCAGGGCAGAACAACCAAGGTCACTCTCTTCTCTATTCCTCATTCTCTGTTTCCTTCTCTATCTTCCTTTCTTGACTGTTGATTGGATGTTAGCCTTTCAAATACTACTATATTGATTTGTATTATACGTATGCACCTTATGAATTCCAATATTAATTATCTTTATTAGGCTTTATTTCATAAGCCCAAAAATCGTATCAATTTAGGCTCCATGATTGGCTATAATTACAATTGAGAAAATCAAGTTTGGGACAACTGAGTAGAACTGCAAGTATCAGCAAATAAAAATATTTTGTAGAATGTAGATCTGTTTACTTATACTCAAAGTAAATGATTCTCTAAGGTATCGCACAACAGATGATGAAGTGTATCTAAATGTTTCATGAATCACAAACAAATACACCAAAAGAAAAATCCCAGCTTTAGCTTCAGAGGGACCAGACAAATTAGAGACTCATGTAAATCGATTATAGTTAGTATTAATTTACAGGAATGGTCCTAGGAGCAATCTGTCTCAGATGCATATACTGTACAGCTCAAGTCACCAATGCTTAATTACACTAATAATCTATTCATGGAGAGTGGATTACTATCTTCATTTATGACTGAATTAGAAAAATATTTGCTCATGGAAAGGATTTCAGCAGTTTACATAAGGGCTGCAATAATGTATACACTTCTATCTTGCTAAATTGTGTGCACTACTATTAAAAAGGATAATTATTCGGGTACCAGCTTTAGTTGGTATAGCCTTCCTGATTCCTATTATTTAATTTTTTTTCTAGAAGTTATTTATATCGCTGTTACTGAAGACATCTCGACTGAAATTATTTTTCCCTGCGCCTGCAACAGTAGAAAGTTCAGTAGCACATGTTGATTTAGGGAACTGTTTAAACAAAAAAGGTTAACTCACACAAGATGTAGTTTTGGCCAACATCGGCCCATATTAGGATGCTTCATTCTGATCCTATTTTATTTTGCATCAGCAGGCACTGCACGGCTGCAGCGTTGTAATTAAATCATCGACATCAGTGGTGGGGCCTTATGCTTGGGTACGCAGCGGAGGAGGGAGAAATAAATTATCTGTACTGACCATCGGTAAGTAATATTTACACCTATCCTTATTTTTCCAAGTGCCAGTAAAATGTCTTAGACTACTTGATCAAGCATAGAATTGAGCTATAAGAGCAATGAGTTTCAATGATATTTTGTGTGTGTGTAGAAGTGTGAATGATGTGTCGACAGGAAGAATGGGTTCTCGTATTAATGAATATATGTACTGATGACGATATATGCCTCCATTATTCTGCTGCTGAAGGTTGAGCGTGTTGTAGTCTATCATTTATAATATTCGTTCAGTTTTTTAATTTGATCGAGCCATATGAATATCATATCAACATTGCTAGACTATATCTCAAAAAAAAAAAACATTGCTAGACCATCTAGCTTCAGTATGAATTTTGTGACGATCACGGATTTGTACCTTAGCACTCTTTGTTGAATCAGTTTTTCAAGAATTCACACTGACTCACAAGAGAAATTGCATTGTCCTTGAAGAAAAATACATGGAGGTGTCTAAATTTTACACTAAAACTTTTGGTACCTGGAGGTACCAAATTTTATACTAGAAAATATGGTACCTCCTGGTACCTTATCAAGGATGGTAAAATTACCCGACTCACAAAGAGAAGCTTCACTAAGCACATTGTAAGTGTACTACTGCACATGCTTATGAGACTAGATACCAGTTAAGCCACTAGCTAGGAGGGAGATGGAAATTATCTTTGTGGGACCTGCTAGAAATATCAGTGAAAACCATCTCTATGCCAGTTGAAACAATCATGGAAAAGGGTTTTAAGGCATTACTCGTACAGTTTTTGAAGTTCACGGTAAAAACAAACTTTTTCTTTGTTCAGTGCATAAAATATACCCCAAGCAGAATTCGTAAGATAGAAGTCGATGTTTTTTCTACCTAAAATTAAAGCATCTTCATAGTTACAGGTGCTCTTGAGTCTTGAAAATATCTCCTCTCCTAAAGTTATAAGAAATTAACAAAAGAGCATCCAAGCTTTACCTCGTTTCAGCGCATCAGGAAAAGAATGAGATGTTTAACACACATCTTATTTCTTTTCAAAGTTGATCCATCCATCCAGACCATCCTCGCCCGGCAGTAGTTCTCTTTTCAAAATCAGCTCCATTTTGTTTTTACCTGTCAATTTGATGGGCGTTATTATATGCAAAACATTATATGTAAAACATAGTGAGATCATCAATACCGCAATGATTTGTACCTAGCTCAGTATATGGGTCATCCACTGGACCATTCAATTCAAGAATGAAGAAATAATCGATCCCATCAACTAAACCTAACAATTAATATATAGGTAATATTCAGGTTCTGATAGTGATTCAATGGACCCGGCTGGACATCGATCATACCATCATATATGGAAAGAAATTTATAAAACTGTCAAATTGGATTGAGGATTTTGGGCATGTGGCTTATGCAAGGCAGCGTCACCATGTCTTTGTGATAGTACTGTATTAGTGTCTGGATTCCTTGGGCCACCTTTTTTTTGAGAGATAGGGGCTCTTCTCAAGCTGGGCTACGCAGGAAACATCTAGCCCGAAACTATAGATATGCCCCTTGGACTGGTTTAGTTGCAACCTTAACCTTAACCTTAACCTTGTTCAATTTTGTTGACAGATCCTCTGCCGCTCTGAACCCCTGAACATAACTACATAATGTTTATAACTCTTTGAGAAAATTTGATTCTATCATTGATGATAGGAGATCGATTTCACACATATTTCACAACTACAACATGGTGAGCAATTTTCTTCTATAAACACCAAGACTGTAACATCGATATCGACTTTTCAGTTGAATTATCAAGCTAGAATTCAGAATTTCAGAAGCCAAAGAGGAAACAGAACATGCCGAACCTTAGGCGGACAGAACGAAGCGGCAGAACACCTTGACTGTGTATGTTTGTCGCCGACCGGCTGCTCAGAACACAACAGGAAACAAAAAATGGCACGGTACTGGAGTACATCCATCTGAGCGTGCTGTCAAACTGAACATAAGGTATTGGCGTGTTCCTTCTTGACTCGCACGGTCACGCCGTGTTTTTGATGGAGTAAAACATCCCGGTCACTAAATTCAAATAAGGAAAAGATATTGTTACTATAATTTATTACAAGTTCATACAAGCAGAATAGCAAAAGATAAAGCCATAGCTGGATTGAATTTCCCCTTTTATATTTTTTCCCCTTCTTAGATGGTTGGCTTGGACAGATATTACGAGAAGATCTGCCATTGCTCTATAGCTTGATTAAAGTTAATATTGGCACAATTAATCAAGGCTAAGATACACGTTACTTTGCTCCACAAGATTATTCCAACAGATTCACCAAGCTAGTAATAATCCACTCGATCCAGATTACCAGATAGGTGTTTTAATTGGAAAGAACAAACATGCTTGAGTTAAACTAAAATTGAACCTGCTGGCCAGCCGGTTGGAACAATTGATTGCGTTCCATTGGAGTCAAAGCAAGCATGTCCCTATTCAGGGACCAGTAACGAGGGACAATTTGTGGTCCCCATATATCTTCTCTCTACAACCACCAGAAAACCAGAGCAATTTTTTGCATCCACATATGATGTGGAATGAAGCAGCTGCTCGCACATTTATATTATGGTAACTAGGTCTGTCAGCCAACAATCACAGGAATCATTCCTAGCCACAAGTCACCCCATCCATATCCTCCTGATCATCAAGTACAAACAGAAACGTTTTTCACCTATCAGTTATGGTTGGATGTTGTAATTTCATACACAGATATTTTTTTTAATGATATGCTCAAGTTCTTGATAAATCGCTTTTTTTCTTGGGCTGGGTCCGCTGGGATTTATGTTTACAATTGTTTATATACACCTCTTCACAGTGATAATATGCTAAATACTCCATAGAAGAAAATATAATAGACATGCAATCTCAATGGGATTATAGTCACCTAATATACAATACAAATTTTCTTTGTTCCGGAAAAGGGAAATTTGTTTGTTCCTCTACTCGATTACGATGTTCCTGGAGTAATTTTCTCCAAACTTCTTTTAGGATGAAGTTCTGAGCAAAAACTTAACCTTTTAGGTACTTTCACTAATAAAAGAAAACACTGATGCAGGCTCTGACGTAAGATATATGTAACTCAGGAGAGACATCCTAGAATAGAACCCATTTTTGCAATTTTTTAGAGTTACATCTGGCTCTCAGTCATAAAATTGTACTGGTATTTGATAATGACCTCACTTCGCTAGACTTTTGTTGTGAGAACATTTGAACAATCTCAATTCCTCCCATCATGGTGCTGCTGCTTGCTACCGGTATAAATATATACCTAAAGCTGCAGTTAGCTAACACCTTCTGCCCTGACTATCATAGCCACATCTCCATAATAGACAAACTCATAAGATGAAAATTCTCGAATCTTTTGGTCATAGTGACTGTCAAGTAGTGATCAACATGATAGAGCACCAAAAGGCTCTCATGGTGGAGCTGCGTGGCATGGTCATGCCAATACTTCCGAGCGACAATGAACAAGCCAAGCTTGCTCTTTAACTCTTGGGAGATATATTAAGTTGCTCAGATAAGGCTATCTCCATGCTAGAACTTGGTGGAGACACTAACAAGCTGACCAATCTTGTTGGAGGTAAGAGAAAAGGTGACAAGCATAGCATGGACAACCACAACTTGGAGGAGGAAGCCAAAGAAAGTGTTAGCAAGAGAAGGTATATGTATATATTACATGCCACTAGAGGAATGCCCACTAGCTTATCATTCATTGCTAACGAAATTTGATTGATCCTCTTGATTATGATAGAAAGAATGCAGAACACACAGGTTCAACTGTGGCTCAAGCACCTCACAATGATGGACATCAATGGAGGAAGTATGGTCAGAAATGGATCTCTAGAGCAAAACATTCCAGGTATAAATGAGCATATGAACTCCTGTTTATTTCCATTCCTCGAAGCATATTGATTTTATCTAACAGAAAAAAATATATACATCTAATGAGCTCATTTTCTTAAGCAGGAGCTACTACAGGTGTGCCAATAGGAAAGTGCAAGGTTGTCCTGCAACAAAGACAGTGCAACAAATGGATTCCAGTGGAAATGGAACATCAAAGTTGTTCAACGTTGACTACTATGGCCAACACACATGCAGGGGAGATGGCATAGCCAATCCATATGTTGTCGACACAGCCCATCACAGTATGGAACCTATCAATCAAAACGAATGCAATAGCCCTACACTTGAACACGAAGCCCATGAAGTTCAAGATGAAAGATTTGAAAACTTGTGTATGGTACAAAATATGCCAGAGTATTTGATAGATTTTGAATTGGAGAGAGCCTTCGAGTTTATTGTGAACTCACCATTGGGTTCTGAGCATTGGACGTTCGATGATTCAATAAGATGTGAGCACAGTCCAATATGCATATGGGGATGATGACTTGATGTTAGCTATAAGCTAGCTTGGAGTTTCTTCCAGGATGTGCTGTAATGATAAGTTGTGACCTGGTAAAAATACATAGCATTTTGCTCATGACTAAGAAGTAAACCTGAAATTAAGAAGCATGTGTATAAGCTATTATTACCATTATAAAAATTGAAGATGTTTCCGCGGTCCGTCATCCGTGTTTGAGTCGGTTATAAAAATTGAAGATGTTTCCGCGGTTCGTCATCCGTGTTTGAGTCGGTTTTAATTTTATGTTTTGGTTTTAATCTATATCTCTTCTCTTCTCTATCTCTATCTCTACTATTATAAAAATTGAAGATGTTTTTGCCAGTATTTTGGTACGTCATCCATGTATGAGTCGGTTTTTAAGTTCTTTTTCTTTTGAAAATACATATCCGTATTT
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CDS seq | ATGCTAGAACTTGGTGGAGACACTAACAAGCTGACCAATCTTGTTGGAGGTAAGAGAAAAGGTGACAAGCATAGCATGGACAACCACAACTTGGAGGAGGAAGCCAAAGAAAGTGTTAGCAAGAGAAGAAAGAATGCAGAACACACAGGTTCAACTGTGGCTCAAGCACCTCACAATGATGGACATCAATGGAGGAAGTATGGTCAGAAATGGATCTCTAGAGCAAAACATTCCAGGAGCTACTACAGGTGTGCCAATAGGAAAGTGCAAGGTTGTCCTGCAACAAAGACAGTGCAACAAATGGATTCCAGTGGAAATGGAACATCAAAGTTGTTCAACGTTGACTACTATGGCCAACACACATGCAGGGGAGATGGCATAGCCAATCCATATGTTGTCGACACAGCCCATCACAGTATGGAACCTATCAATCAAAACGAATGCAATAGCCCTACACTTGAACACGAAGCCCATGAAGTTCAAGATGAAAGATTTGAAAACTTGTGTATGGTACAAAATATGCCAGAGTATTTGATAGATTTTGAATTGGAGAGAGCCTTCGAGTTTATTGTGAACTCACCATTGGGTTCTGAGCATTGGACGTTCGATGATTCAATAAGATGTGAGCACAGTCCAATATGCATATGGGGATGA
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Protein seq | MLELGGDTNKLTNLVGGKRKGDKHSMDNHNLEEEAKESVSKRRKNAEHTGSTVAQAPHNDGHQWRKYGQKWISRAKHSRSYYRCANRKVQGCPATKTVQQMDSSGNGTSKLFNVDYYGQHTCRGDGIANPYVVDTAHHSMEPINQNECNSPTLEHEAHEVQDERFENLCMVQNMPEYLIDFELERAFEFIVNSPLGSEHWTFDDSIRCEHSPICIWG |
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Function | Probable WRKY transcription factor 46 [UniProtKB/Swiss-Prot:Q9SKD9] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_12G0015000 | OsMH63_12T0015000-mRNA-1 | Chr12 | 949523 | 955789 | + | maker | ||
CDS seq | ATGCTAGAACTTGGTGGAGACACTAACAAGCTGACCAATCTTGTTGGAGGTAAGAGAAAAGGTGACAAGCATAGCATGGACAACCACAACTTGGAGGAGGAAGCCAAAGAAAGTGTTAGCAAGAGAAGAAAGAATGCAGAACACACAGGTTCAACTGTGGCTCAAGCACCTCACAATGATGGACATCAATGGAGGAAGTATGGTCAGAAATGGATCTCTAGAGCAAAACATTCCAGGAGCTACTACAGGTGTGCCAATAGGAAAGTGCAAGGTTGTCCTGCAACAAAGACAGTGCAACAAATGGATTCCAGTGGAAATGGAACATCAAAGTTGTTCAACGTTGACTACTATGGCCAACACACATGCAGGGGAGATGGCATAGCCAATCCATATGTTGTCGACACAGCCCATCACAGTATGGAACCTATCAATCAAAACGAATGCAATAGCCCTACACTTGAACACGAAGCCCATGAAGTTCAAGATGAAAGATTTGAAAACTTGTGTATGGTACAAAATATGCCAGAGTATTTGATAGATTTTGAATTGGAGAGAGCCTTCGAGTTTATTGTGAACTCACCATTGGGTTCTGAGCATTGGACGTTCGATGATTCAATAAGATGTGAGCACAGTCCAATATGCATATGGGGATGA
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Protein seq | MLELGGDTNKLTNLVGGKRKGDKHSMDNHNLEEEAKESVSKRRKNAEHTGSTVAQAPHNDGHQWRKYGQKWISRAKHSRSYYRCANRKVQGCPATKTVQQMDSSGNGTSKLFNVDYYGQHTCRGDGIANPYVVDTAHHSMEPINQNECNSPTLEHEAHEVQDERFENLCMVQNMPEYLIDFELERAFEFIVNSPLGSEHWTFDDSIRCEHSPICIWG
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_12G0015000 | OsMH63_12T0015000-mRNA-2 | Chr12 | 949523 | 955789 | + | maker | ||
CDS seq | ATGCTAGAACTTGGTGGAGACACTAACAAGCTGACCAATCTTGTTGGAGGTAAGAGAAAAGGTGACAAGCATAGCATGGACAACCACAACTTGGAGGAGGAAGCCAAAGAAAGTGTTAGCAAGAGAAGAAAGAATGCAGAACACACAGGTTCAACTGTGGCTCAAGCACCTCACAATGATGGACATCAATGGAGGAAGTATGGTCAGAAATGGATCTCTAGAGCAAAACATTCCAGGAGCTACTACAGGTGTGCCAATAGGAAAGTGCAAGGTTGTCCTGCAACAAAGACAGTGCAACAAATGGATTCCAGTGGAAATGGAACATCAAAGTTGTTCAACGTTGACTACTATGGCCAACACACATGCAGGGGAGATGGCATAGCCAATCCATATGTTGTCGACACAGCCCATCACAGTATGGAACCTATCAATCAAAACGAATGCAATAGCCCTACACTTGAACACGAAGCCCATGAAGTTCAAGATGAAAGATTTGAAAACTTGTGTATGGTACAAAATATGCCAGAGTATTTGATAGATTTTGAATTGGAGAGAGCCTTCGAGTTTATTGTGAACTCACCATTGGGTTCTGAGCATTGGACGTTCGATGATTCAATAAGATGTGAGCACAGTCCAATATGCATATGGGGATGA
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Protein seq | MLELGGDTNKLTNLVGGKRKGDKHSMDNHNLEEEAKESVSKRRKNAEHTGSTVAQAPHNDGHQWRKYGQKWISRAKHSRSYYRCANRKVQGCPATKTVQQMDSSGNGTSKLFNVDYYGQHTCRGDGIANPYVVDTAHHSMEPINQNECNSPTLEHEAHEVQDERFENLCMVQNMPEYLIDFELERAFEFIVNSPLGSEHWTFDDSIRCEHSPICIWG
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_12G0015000 | OsMH63_12T0015000-mRNA-3 | Chr12 | 949523 | 955558 | + | maker | ||
CDS seq | ATGCTAGAACTTGGTGGAGACACTAACAAGCTGACCAATCTTGTTGGAGGTAAGAGAAAAGGTGACAAGCATAGCATGGACAACCACAACTTGGAGGAGGAAGCCAAAGAAAGTGTTAGCAAGAGAAGAAAGAATGCAGAACACACAGGTTCAACTGTGGCTCAAGCACCTCACAATGATGGACATCAATGGAGGAAGTATGGTCAGAAATGGATCTCTAGAGCAAAACATTCCAGGAGCTACTACAGGTGTGCCAATAGGAAAGTGCAAGGTTGTCCTGCAACAAAGACAGTGCAACAAATGGATTCCAGTGGAAATGGAACATCAAAGTTGTTCAACGTTGACTACTATGGCCAACACACATGCAGGGGAGATGGCATAGCCAATCCATATGTTGTCGACACAGCCCATCACAGTATGGAACCTATCAATCAAAACGAATGCAATAGCCCTACACTTGAACACGAAGCCCATGAAGTTCAAGATGAAAGATTTGAAAACTTGTGTATGGTACAAAATATGCCAGAGTATTTGATAGATTTTGAATTGGAGAGAGCCTTCGAGTTTATTGTGAACTCACCATTGGGTTCTGAGCATTGGACGTTCGATGATTCAATAAGATGTGAGCACAGTCCAATATGCATATGGGGATGA
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Protein seq | MLELGGDTNKLTNLVGGKRKGDKHSMDNHNLEEEAKESVSKRRKNAEHTGSTVAQAPHNDGHQWRKYGQKWISRAKHSRSYYRCANRKVQGCPATKTVQQMDSSGNGTSKLFNVDYYGQHTCRGDGIANPYVVDTAHHSMEPINQNECNSPTLEHEAHEVQDERFENLCMVQNMPEYLIDFELERAFEFIVNSPLGSEHWTFDDSIRCEHSPICIWG
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 4.836881 | 5.087699 | 5.80537 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0117400 | SBH | 0.862213 | 0.000000 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g02520 | SBH | 0.498296 | 0.000000 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0117400 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0001180 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0001220 | SBH | 0.000000 | 0.0 | 0.044287 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0001200 | SBH | 0.099462 | 0.000000 | 0.131957 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0001190 | SBH | 0.000000 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0001340 | RBH | 6.883327 | 2.149907 | 7.431344 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0015600 | RBH | 0.81806 | 0.460498 | 0.4151525 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0001320 | RBH | 0.191580 | 0.156515 | 0.629280 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0017300 | SBH | 4.9886135 | 0.4560595 | 0.441165 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0001100 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0001380 | RBH | 0.884228 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0001350 | RBH | 4.559852 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0001200 | SBH | 0.0 | 0.0 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0001250 | SBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G001180 | SBH | 0.000000 | 0.0 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0001190 | SBH | 0.0 | 0.0 | 0.0 |