Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0000900 | OGI:12000110 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:95443-95754 | ||||||||
| Gene Symbol | CCT36, OsCCT36, OsCMF12, CMF12, OsRpp30, Rpp30 | ||||||||||
| DNA seq | ATGGCGCCCGCCGGCTTCTTCTTTGACCTCAACATCCTCCCCCCTCCCCCCGCCCTGCCCGTCGTCAACTCCATACCTACCAACACTAGCGCAATCGCCCGTGCCTTCGACCTTAGCTACTCCAGCGTCATGCTCATGATCACCCTCAACGTGGCCTCCTTGCTGATGATTCCCACGCACCCATTGCCTCTGCCTCCCTCCACCGCCGCCCTTGCTGACACTACACACGCATCACCCTCTCCCTCGACTCTTCCTCTGCCCTCGCCCCCTCCACCTCCTACCTCCTTCGCACCTACACTACTGGAGAACTGA |
||||||||||
| CDS seq | ATGGCGCCCGCCGGCTTCTTCTTTGACCTCAACATCCTCCCCCCTCCCCCCGCCCTGCCCGTCGTCAACTCCATACCTACCAACACTAGCGCAATCGCCCGTGCCTTCGACCTTAGCTACTCCAGCGTCATGCTCATGATCACCCTCAACGTGGCCTCCTTGCTGATGATTCCCACGCACCCATTGCCTCTGCCTCCCTCCACCGCCGCCCTTGCTGACACTACACACGCATCACCCTCTCCCTCGACTCTTCCTCTGCCCTCGCCCCCTCCACCTCCTACCTCCTTCGCACCTACACTACTGGAGAACTGA |
||||||||||
| Protein seq | MAPAGFFFDLNILPPPPALPVVNSIPTNTSAIARAFDLSYSSVMLMITLNVASLLMIPTHPLPLPPSTAALADTTHASPSPSTLPLPSPPPPPTSFAPTLLEN |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0000900 | OsMH63_12T0000900.1 | Chr12 | 95443 | 95754 | + | maker | ||
| CDS seq | ATGGCGCCCGCCGGCTTCTTCTTTGACCTCAACATCCTCCCCCCTCCCCCCGCCCTGCCCGTCGTCAACTCCATACCTACCAACACTAGCGCAATCGCCCGTGCCTTCGACCTTAGCTACTCCAGCGTCATGCTCATGATCACCCTCAACGTGGCCTCCTTGCTGATGATTCCCACGCACCCATTGCCTCTGCCTCCCTCCACCGCCGCCCTTGCTGACACTACACACGCATCACCCTCTCCCTCGACTCTTCCTCTGCCCTCGCCCCCTCCACCTCCTACCTCCTTCGCACCTACACTACTGGAGAACTGA
More
|
|||||||
| Protein seq | MAPAGFFFDLNILPPPPALPVVNSIPTNTSAIARAFDLSYSSVMLMITLNVASLLMIPTHPLPLPPSTAALADTTHASPSPSTLPLPSPPPPPTSFAPTLLEN |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0000090 | RBH | 1.310410 | 0.117180 | 5.686260 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0000090 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0000600 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0000070 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0000800 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0000090 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0000090 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0000090 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0000090 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
