Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0436100 | OGI:11081190 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:32755117-32756898 | ||||||||
| Gene Symbol | RLCK352, OsRLCK352 | ||||||||||
| DNA seq | CTATCTGCCATCTATTGCAGACAATGTGATACCGTTAACACTAGATGCCGCAACAACATTTGACGCCTCTTCGTTCGTCAGCCTCATGTTGAAAAATGCAGCGTGCTTAGGCTCAGGTAGAGTCATGGTCTCGTTGCTTAGCATCGCAACAACCTCTGACGTGGTGGGCCGATCGGCCGCATTCTCTTGCACACAAAGCAAAGCAATGTTAATACATCTCATTATCTCCATTGTATGAGAATCGGTGGGTAACAATGGGTCTACGAGTTGAAGCCATGTTTCATCTTTCCACATCTGCCATGCCTGCAAGGTGTATGATATAGCAAAACATGAAAACGATCTGCATGACATGACATTAGTTATTCTTTCTACCAAAGAAGTAAAGAAAAAAGAGACTTTCATGCTATTCAAATCTTATGCGCTTTCCACTTTTGAGAGATTAGAAACTCAAGTCATTATTATATGATGAAAACTTACATGGCCAAGAAGGTTAATAAATTCACCATATCGATGAAAACTCGATGTCTTTTTCCCACTGAAAATCTCAAGAATTAGCACACCGAAACTGAATACGTCGGATTTGATTGAAAAAAGGCCCTCAGAAGCATACTCAGGAGCCATATAACCACTGAAAAGACGCATATAAAAAACATTGAAGTGAGGTAACAGTATTTGCAGTTTTTGTGTACAACTAATGAATTTTATAATAAAATCTTACTATGTTCCAACGATCCTTTTTGTATTCCCTTCATTATCATTCGCGCTAAATATTTTTGCAAGTCCAAAATCTGCAATTTTAGGGTTCATTTCACGGTCCAAGAGAATATTGCCTGCCTTGAGATCTCTGTGTATGACACGCAACCGAGAGTGCTTATGCAAATACAAAAGTCCTTGTGCTATCCCATCTATTATCGCTAGGCGTTTATGCCAATCTATCAAAGCTCTTCTTGTTTCATCTGCAAATCAATTCAACATAGATATAACAAAGAATATACATTTCTCAGTTAGGGTTAGTGAACCAAATCTTTTATTTGCGGTACGGTACAGCAAGAAGTAATACCAAAAATGAAGAAATCCAAGCTTTTATTTGGCAAATATTCATATATTAGTATTTTCTCCTGTCCCTGGTAACAGCATCCCAAGAGCCTAACAAGATTTGTGTGCTGGAGCTTAGCTATGAGTTGGATTTCATTTTTGAACTCTGTCAAGCCTTGCCCTGAATGAGAAGCAAGTCTCTTAACTGCTATCTCCACCCCATCAGGAAATCGGCCCTAGAGACAAGTGCAAAAGAGATGGATGAGTGACACGAATTAATTTGCAGTTTCAATTGACTTTTGGCACTTGACAAATATTATGACCAATATATAATCGGCCAAAGCAGAGAGTGAATTGCATAATATGTAAATTAACGAATAATATATGTGTATAACTTTTGTCAGATTTTTCCTCTTATGTACCTTGTATACAGGACCAAAGCCTCCTTGACCAAGTTTATTTTCTTCTGAGAAATTATCTGTGGCCTCTAATACTTGCGAAAAATCATAAACAGTGAATTCTGAGTTCCTTCCTTGTAGCCCCCAAATTAGTGCCTCATCTTCATCCGCGTTCGTCTTACCTGATAAATGAAGAATTTATTTGATACTGTCAATTGATTTAGCTCTTTTTGCATTCATGCATATATATAACTTTTCTATGTAGATATCTGACCTTTCATGTGCCTTCTCAATATGATGGAAGCGATGACACAGATTGACGGAGCGTGGGGCTCCTCACCGGGAGACC
More
|
||||||||||
| CDS seq | ATGAAAGGTAAGACGAACGCGGATGAAGATGAGGCACTAATTTGGGGGCTACAAGGAAGGAACTCAGAATTCACTGTTTATGATTTTTCGCAAGTATTAGAGGCCACAGATAATTTCTCAGAAGAAAATAAACTTGGTCAAGGAGGCTTTGGTCCTGTATACAAGGGCCGATTTCCTGATGGGGTGGAGATAGCAGTTAAGAGACTTGCTTCTCATTCAGGGCAAGGCTTGACAGAGTTCAAAAATGAAATCCAACTCATAGCTAAGCTCCAGCACACAAATCTTGTTAGGCTCTTGGGATGCTGTTACCAGGGACAGGAGAAAATACTAATATATGAATATTTGCCAAATAAAAGCTTGGATTTCTTCATTTTTGATGAAACAAGAAGAGCTTTGATAGATTGGCATAAACGCCTAGCGATAATAGATGGGATAGCACAAGGACTTTTGTATTTGCATAAGCACTCTCGGTTGCGTGTCATACACAGAGATCTCAAGGCAGGCAATATTCTCTTGGACCGTGAAATGAACCCTAAAATTGCAGATTTTGGACTTGCAAAAATATTTAGCGCGAATGATAATGAAGGGAATACAAAAAGGATCGTTGGAACATATGGTTATATGGCTCCTGAGTATGCTTCTGAGGGCCTTTTTTCAATCAAATCCGACGTATTCAGTTTCGGTGTGCTAATTCTTGAGATTTTCAGTGGGAAAAAGACATCGAGTTTTCATCGATATGGTGAATTTATTAACCTTCTTGGCCATGCATGGCAGATGTGGAAAGATGAAACATGGCTTCAACTCGTAGACCCATTGTTACCCACCGATTCTCATACAATGGAGATAATGAGATGTATTAACATTGCTTTGCTTTGTGTGCAAGAGAATGCGGCCGATCGGCCCACCACGTCAGAGGTTGTTGCGATGCTAAGCAACGAGACCATGACTCTACCTGAGCCTAAGCACGCTGCATTTTTCAACATGAGGCTGACGAACGAAGAGGCGTCAAATGTTGTTGCGGCATCTAGTGTTAACGGTATCACATTGTCTGCAATAGATGGCAGATAG
More
|
||||||||||
| Protein seq | MKGKTNADEDEALIWGLQGRNSEFTVYDFSQVLEATDNFSEENKLGQGGFGPVYKGRFPDGVEIAVKRLASHSGQGLTEFKNEIQLIAKLQHTNLVRLLGCCYQGQEKILIYEYLPNKSLDFFIFDETRRALIDWHKRLAIIDGIAQGLLYLHKHSRLRVIHRDLKAGNILLDREMNPKIADFGLAKIFSANDNEGNTKRIVGTYGYMAPEYASEGLFSIKSDVFSFGVLILEIFSGKKTSSFHRYGEFINLLGHAWQMWKDETWLQLVDPLLPTDSHTMEIMRCINIALLCVQENAADRPTTSEVVAMLSNETMTLPEPKHAAFFNMRLTNEEASNVVAASSVNGITLSAIDGR |
||||||||||
| Function | G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [UniProtKB/Swiss-Prot:Q9ZT07] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0436100 | OsMH63_11T0436100.1 | Chr11 | 32755117 | 32756898 | - | maker | ||
| CDS seq | ATGAAAGGTAAGACGAACGCGGATGAAGATGAGGCACTAATTTGGGGGCTACAAGGAAGGAACTCAGAATTCACTGTTTATGATTTTTCGCAAGTATTAGAGGCCACAGATAATTTCTCAGAAGAAAATAAACTTGGTCAAGGAGGCTTTGGTCCTGTATACAAGGGCCGATTTCCTGATGGGGTGGAGATAGCAGTTAAGAGACTTGCTTCTCATTCAGGGCAAGGCTTGACAGAGTTCAAAAATGAAATCCAACTCATAGCTAAGCTCCAGCACACAAATCTTGTTAGGCTCTTGGGATGCTGTTACCAGGGACAGGAGAAAATACTAATATATGAATATTTGCCAAATAAAAGCTTGGATTTCTTCATTTTTGATGAAACAAGAAGAGCTTTGATAGATTGGCATAAACGCCTAGCGATAATAGATGGGATAGCACAAGGACTTTTGTATTTGCATAAGCACTCTCGGTTGCGTGTCATACACAGAGATCTCAAGGCAGGCAATATTCTCTTGGACCGTGAAATGAACCCTAAAATTGCAGATTTTGGACTTGCAAAAATATTTAGCGCGAATGATAATGAAGGGAATACAAAAAGGATCGTTGGAACATATGGTTATATGGCTCCTGAGTATGCTTCTGAGGGCCTTTTTTCAATCAAATCCGACGTATTCAGTTTCGGTGTGCTAATTCTTGAGATTTTCAGTGGGAAAAAGACATCGAGTTTTCATCGATATGGTGAATTTATTAACCTTCTTGGCCATGCATGGCAGATGTGGAAAGATGAAACATGGCTTCAACTCGTAGACCCATTGTTACCCACCGATTCTCATACAATGGAGATAATGAGATGTATTAACATTGCTTTGCTTTGTGTGCAAGAGAATGCGGCCGATCGGCCCACCACGTCAGAGGTTGTTGCGATGCTAAGCAACGAGACCATGACTCTACCTGAGCCTAAGCACGCTGCATTTTTCAACATGAGGCTGACGAACGAAGAGGCGTCAAATGTTGTTGCGGCATCTAGTGTTAACGGTATCACATTGTCTGCAATAGATGGCAGATAG
More
|
|||||||
| Protein seq | MKGKTNADEDEALIWGLQGRNSEFTVYDFSQVLEATDNFSEENKLGQGGFGPVYKGRFPDGVEIAVKRLASHSGQGLTEFKNEIQLIAKLQHTNLVRLLGCCYQGQEKILIYEYLPNKSLDFFIFDETRRALIDWHKRLAIIDGIAQGLLYLHKHSRLRVIHRDLKAGNILLDREMNPKIADFGLAKIFSANDNEGNTKRIVGTYGYMAPEYASEGLFSIKSDVFSFGVLILEIFSGKKTSSFHRYGEFINLLGHAWQMWKDETWLQLVDPLLPTDSHTMEIMRCINIALLCVQENAADRPTTSEVVAMLSNETMTLPEPKHAAFFNMRLTNEEASNVVAASSVNGITLSAIDGR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0719105 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0681400 | RBH | 0.334337 | 0.111012 | 0.284306 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45540 | RBH | 0.196952 | 0.054426 | 0.081792 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0681400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024150 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024100 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023650 | RBH | 0.000000 | 0.0 | 0.334901 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023490 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0023950 | RBH | 0.0 | 0.0 | 0.457399 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0341900 | SBH | 1.787428 | 10.478801 | 2.813982 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024320 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0435400 | RBH | 0.1672735 | 0.0121665 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024180 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024200 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023620 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023440 | RBH | 0.084583 | 0.0 | 0.109105 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023830 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023830 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024080 | RBH | 0.0 | 0.000000 | 0.000000 |
