Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0427300 | OGI:11080170 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:31920852-31923471 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TACTTGATTGTCATTGATGATATATGGGATGAACAACCATGGAAATTTATCAAGTGTGCTCTCTTTGAAAACAAACTTGGCAGTAAAGTAATCACGACAACTCGCAAAACTGAAGTTGCAAAATTATGTTGCTCTTCTGACGAACTTGATGGTATCATTCATCAACTGCAACCTCTTTCGGATGGTGACTCTGAAAAACTGTTGTATTACAAAATATTCGGCAAGGAAGGATGCCCAACCGAATTAAAGGATGTGTCACAGAAAATATTAAAGAAGTGCGAAGGCTGTCCATTAGCTATCAATGCCGTAGCTAGTCTACTTGCAAACAAACCGGCACAAATTCAGGGTCAGTGGAATAGTGTATTCAACTCAATTAGTACTGGACTCGAAAATAATTATGGTGAGAAGGACATGTGGTTGATATTATCTCTTAGCTATAATGATATGCCTGCACAGCTAAGAGATTGTCTGTTGTATCTAAGCATATTCCCGGAGGACTATATAATTGGGAGAGATGACTTGATACAGAGATGGATAGCTGAAGATTTAGTTCATGGAAGACAGGATGACAACTTGTATGAATTAGGAGACAAGTACTTTAACGAGCTTATTAATAGGAGTATGATCCAACCAATCGATGTGGATGCCTTTGGGAGGGCGCAAGCTTGTAAAGTACACGATTTAGTACTTGACTTTATCAGTTTTTTGTCAGCTGAAGAAGCCTTCGTCACGATATTCAATGGCTTGCAGTCTTTTCCACCTCAGCTAGACAACATACATCGGCTATCCCTTCGAAACAGAGAGGGAGAGCACGGCATACCTACCAAAAGAAGAATGCCTAATGTGAGGACACTTGTTGTATCCTCACGTGCTGTTAATTCAATGCCTTCCCTCTCCATCTTTCCAGTTCTACGCGTCCTGGAATTAGAACAGTGCACCGAACGTAACATCAAGGGTGTGGAAAACTTGGTTCACTTGAGGTATTTGAGGCTAACTCAGGCATATCATTTTTATGATTATGATGTTTGCATTAACCTCCCAAAAGGAATTGGAAATTTACAGTTTCTGCAAACACTAGACCTAAAGGAGGCCAGGATAGAAGAATTGCCATCCAGTGTGGTCCAGTTTAGTCAACTGAGGGTGCTAGAGATTTCACTACGTAAATGTGGTAAGATATTTGAGAAGCATTTGATCCAGTGTTTGTGCAATGCGAAGCAACTCGAAGCTCTTTGTATCTTTGCTCCAAGTTTGTCCTTGGATTTCATGTTGCAAGTAGATTGGACCCCTACACACCTTCGAAGATTTACAGCATTTCCCCGTCAGAGGACTGAACATATACTCAGGCGAGGGTCTGTATGGGCAACCTGGAGCCCATTCTCCACACTGCCAATGTGGATTAATTCCTCACTCTCCGGCCTCTCTGATTTATCGATGATGGTCAGGACACTGCGGCAGGAAGACATCGAAATTCTTGCAAATCTCCTCATGCTTCGTTCTGTGGATTTGGAAGTGGTAGAAGCCACTGGAACAAGGCTGCATATCAATGGCAGTGTAGGTGGTACTGGCCATGCAACAGCATTCCAATGTCTAGGAAACCTCAAGTTTGCAAGCCGTGCAATGGGGCTGGTATTCAGACCAGGAGCCATGCAGAAGCTTCAGAAGCTATATCTTTGCTTTGATGTTGCAGAGACAAAAGATGTTCATGGTGATTTCGACTTTGGGTTTCCCGGCTTGCAGAATCTCACCTCCCTTAAGACCGTGAACGTGGAACTTGACTGTCGCTGCTCCAGGCTCTGGGAAGTTGAGGCTGCAGATGCTGCATTGCGTAATGCAACCAACCTTAATCCCAACCGTCCAACTCTTGATTTGGAGAGGCATTTCGAAGGAGAGATGCTATTTGATCAACAGGAAGAGATCCCTGACAAAGTACAAGCAAACAAGAAAGAAGATGTACTGATTTACTGCTCATCTCTTGAAATCTGTGTTCGTTTGTTTATGTTCTCATTTCATCTTCTCCTTTCTAATCTCTTGGTTTGGTATGTACTCAGGCTCTACTTTCCAGAGTTGGGCCTTTTGGTGGAAACGGTGGGAGGGCCCATGACATCCGGGTAGCACCCCACCGTCTGGAAGACGTGACAATTCACAGTGGCACCGTCGTACATTCACTTGCATTTTCATACACTGATCATAATGGGCAGCAGCGCAGTGCAGGACCGTGGGGTAGCTGTATTGGGAGTGTTTCAACGGTGAGTTAATTTTTCATTCTTCATCTCAGCTTATTATGCTACCCAGCAATAATTACCACCTCAGTCCTCATATAAAAACATCAGCTTATCGATCTGTTATTGAATATTATGTATTTCTTCTTCGCTTGCAGATTCATCTTGGTCCTTCGGAGTATCTCATAAAAGTTTCTGGGACAATTGGTTCATGTTTTGCACTATCCAACCTTATAACCTCGCTTACCTTTGTCACCAATGCTGCTTCCTATGGACCTTTCGGAGAAGGTGGAGGAGATCCCTTCGTCTTTCCCGTGCAGAGCAATAGCAGCGTTGTTGGCTTCTTTGGTCGCGCAGGGGCGTACATTGACGCTATCGGTTTCTACGTTCGCCCGCTGTGA
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| CDS seq | TACTTGATTGTCATTGATGATATATGGGATGAACAACCATGGAAATTTATCAAGTGTGCTCTCTTTGAAAACAAACTTGGCAGTAAAGTAATCACGACAACTCGCAAAACTGAAGTTGCAAAATTATGTTGCTCTTCTGACGAACTTGATGGTATCATTCATCAACTGCAACCTCTTTCGGATGGTGACTCTGAAAAACTGTTGTATTACAAAATATTCGGCAAGGAAGGATGCCCAACCGAATTAAAGGATGTGTCACAGAAAATATTAAAGAAGTGCGAAGGCTGTCCATTAGCTATCAATGCCGTAGCTAGTCTACTTGCAAACAAACCGGCACAAATTCAGGGTCAGTGGAATAGTGTATTCAACTCAATTAGTACTGGACTCGAAAATAATTATGGTGAGAAGGACATGTGGTTGATATTATCTCTTAGCTATAATGATATGCCTGCACAGCTAAGAGATTGTCTGTTGTATCTAAGCATATTCCCGGAGGACTATATAATTGGGAGAGATGACTTGATACAGAGATGGATAGCTGAAGATTTAGTTCATGGAAGACAGGATGACAACTTGTATGAATTAGGAGACAAGTACTTTAACGAGCTTATTAATAGGAGTATGATCCAACCAATCGATGTGGATGCCTTTGGGAGGGCGCAAGCTTGTAAAGTACACGATTTAGTACTTGACTTTATCAGTTTTTTGTCAGCTGAAGAAGCCTTCGTCACGATATTCAATGGCTTGCAGTCTTTTCCACCTCAGCTAGACAACATACATCGGCTATCCCTTCGAAACAGAGAGGGAGAGCACGGCATACCTACCAAAAGAAGAATGCCTAATGTGAGGACACTTGTTGTATCCTCACGTGCTGTTAATTCAATGCCTTCCCTCTCCATCTTTCCAGTTCTACGCGTCCTGGAATTAGAACAGTGCACCGAACGTAACATCAAGGGTGTGGAAAACTTGGTTCACTTGAGGTATTTGAGGCTAACTCAGGCATATCATTTTTATGATTATGATGTTTGCATTAACCTCCCAAAAGGAATTGGAAATTTACAGTTTCTGCAAACACTAGACCTAAAGGAGGCCAGGATAGAAGAATTGCCATCCAGTGTGGTCCAGTTTAGTCAACTGAGGGTGCTAGAGATTTCACTACGTAAATGTGGTAAGATATTTGAGAAGCATTTGATCCAGTGTTTGTGCAATGCGAAGCAACTCGAAGCTCTTTGTATCTTTGCTCCAAGTTTGTCCTTGGATTTCATGTTGCAAGTAGATTGGACCCCTACACACCTTCGAAGATTTACAGCATTTCCCCGTCAGAGGACTGAACATATACTCAGGCGAGGGTCTGTATGGGCAACCTGGAGCCCATTCTCCACACTGCCAATGTGGATTAATTCCTCACTCTCCGGCCTCTCTGATTTATCGATGATGGTCAGGACACTGCGGCAGGAAGACATCGAAATTCTTGCAAATCTCCTCATGCTTCGTTCTGTGGATTTGGAAGTGGTAGAAGCCACTGGAACAAGGCTGCATATCAATGGCAGTGTAGGTGGTACTGGCCATGCAACAGCATTCCAATGTCTAGGAAACCTCAAGTTTGCAAGCCGTGCAATGGGGCTGGTATTCAGACCAGGAGCCATGCAGAAGCTTCAGAAGCTATATCTTTGCTTTGATGTTGCAGAGACAAAAGATGTTCATGGTGATTTCGACTTTGGGTTTCCCGGCTTGCAGAATCTCACCTCCCTTAAGACCGTGAACGTGGAACTTGACTGTCGCTGCTCCAGGCTCTGGGAAGTTGAGGCTGCAGATGCTGCATTGCGTAATGCAACCAACCTTAATCCCAACCGTCCAACTCTTGATTTGGAGAGGCATTTCGAAGGAGAGATGCTATTTGATCAACAGGAAGAGATCCCTGACAAAGTACAAGCAAACAAGAAAGAAGATGCTCTACTTTCCAGAGTTGGGCCTTTTGGTGGAAACGGTGGGAGGGCCCATGACATCCGGGTAGCACCCCACCGTCTGGAAGACGTGACAATTCACAGTGGCACCGTCGTACATTCACTTGCATTTTCATACACTGATCATAATGGGCAGCAGCGCAGTGCAGGACCGTGGGGTAGCTGTATTGGGAGTGTTTCAACGATTCATCTTGGTCCTTCGGAGTATCTCATAAAAGTTTCTGGGACAATTGGTTCATGTTTTGCACTATCCAACCTTATAACCTCGCTTACCTTTGTCACCAATGCTGCTTCCTATGGACCTTTCGGAGAAGGTGGAGGAGATCCCTTCGTCTTTCCCGTGCAGAGCAATAGCAGCGTTGTTGGCTTCTTTGGTCGCGCAGGGGCGTACATTGACGCTATCGGTTTCTACGTTCGCCCGCTGTGA
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| Protein seq | YLIVIDDIWDEQPWKFIKCALFENKLGSKVITTTRKTEVAKLCCSSDELDGIIHQLQPLSDGDSEKLLYYKIFGKEGCPTELKDVSQKILKKCEGCPLAINAVASLLANKPAQIQGQWNSVFNSISTGLENNYGEKDMWLILSLSYNDMPAQLRDCLLYLSIFPEDYIIGRDDLIQRWIAEDLVHGRQDDNLYELGDKYFNELINRSMIQPIDVDAFGRAQACKVHDLVLDFISFLSAEEAFVTIFNGLQSFPPQLDNIHRLSLRNREGEHGIPTKRRMPNVRTLVVSSRAVNSMPSLSIFPVLRVLELEQCTERNIKGVENLVHLRYLRLTQAYHFYDYDVCINLPKGIGNLQFLQTLDLKEARIEELPSSVVQFSQLRVLEISLRKCGKIFEKHLIQCLCNAKQLEALCIFAPSLSLDFMLQVDWTPTHLRRFTAFPRQRTEHILRRGSVWATWSPFSTLPMWINSSLSGLSDLSMMVRTLRQEDIEILANLLMLRSVDLEVVEATGTRLHINGSVGGTGHATAFQCLGNLKFASRAMGLVFRPGAMQKLQKLYLCFDVAETKDVHGDFDFGFPGLQNLTSLKTVNVELDCRCSRLWEVEAADAALRNATNLNPNRPTLDLERHFEGEMLFDQQEEIPDKVQANKKEDALLSRVGPFGGNGGRAHDIRVAPHRLEDVTIHSGTVVHSLAFSYTDHNGQQRSAGPWGSCIGSVSTIHLGPSEYLIKVSGTIGSCFALSNLITSLTFVTNAASYGPFGEGGGDPFVFPVQSNSSVVGFFGRAGAYIDAIGFYVRPL |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0427300 | OsMH63_11T0427300.1 | Chr11 | 31920852 | 31923471 | + | maker | ||
| CDS seq | TACTTGATTGTCATTGATGATATATGGGATGAACAACCATGGAAATTTATCAAGTGTGCTCTCTTTGAAAACAAACTTGGCAGTAAAGTAATCACGACAACTCGCAAAACTGAAGTTGCAAAATTATGTTGCTCTTCTGACGAACTTGATGGTATCATTCATCAACTGCAACCTCTTTCGGATGGTGACTCTGAAAAACTGTTGTATTACAAAATATTCGGCAAGGAAGGATGCCCAACCGAATTAAAGGATGTGTCACAGAAAATATTAAAGAAGTGCGAAGGCTGTCCATTAGCTATCAATGCCGTAGCTAGTCTACTTGCAAACAAACCGGCACAAATTCAGGGTCAGTGGAATAGTGTATTCAACTCAATTAGTACTGGACTCGAAAATAATTATGGTGAGAAGGACATGTGGTTGATATTATCTCTTAGCTATAATGATATGCCTGCACAGCTAAGAGATTGTCTGTTGTATCTAAGCATATTCCCGGAGGACTATATAATTGGGAGAGATGACTTGATACAGAGATGGATAGCTGAAGATTTAGTTCATGGAAGACAGGATGACAACTTGTATGAATTAGGAGACAAGTACTTTAACGAGCTTATTAATAGGAGTATGATCCAACCAATCGATGTGGATGCCTTTGGGAGGGCGCAAGCTTGTAAAGTACACGATTTAGTACTTGACTTTATCAGTTTTTTGTCAGCTGAAGAAGCCTTCGTCACGATATTCAATGGCTTGCAGTCTTTTCCACCTCAGCTAGACAACATACATCGGCTATCCCTTCGAAACAGAGAGGGAGAGCACGGCATACCTACCAAAAGAAGAATGCCTAATGTGAGGACACTTGTTGTATCCTCACGTGCTGTTAATTCAATGCCTTCCCTCTCCATCTTTCCAGTTCTACGCGTCCTGGAATTAGAACAGTGCACCGAACGTAACATCAAGGGTGTGGAAAACTTGGTTCACTTGAGGTATTTGAGGCTAACTCAGGCATATCATTTTTATGATTATGATGTTTGCATTAACCTCCCAAAAGGAATTGGAAATTTACAGTTTCTGCAAACACTAGACCTAAAGGAGGCCAGGATAGAAGAATTGCCATCCAGTGTGGTCCAGTTTAGTCAACTGAGGGTGCTAGAGATTTCACTACGTAAATGTGGTAAGATATTTGAGAAGCATTTGATCCAGTGTTTGTGCAATGCGAAGCAACTCGAAGCTCTTTGTATCTTTGCTCCAAGTTTGTCCTTGGATTTCATGTTGCAAGTAGATTGGACCCCTACACACCTTCGAAGATTTACAGCATTTCCCCGTCAGAGGACTGAACATATACTCAGGCGAGGGTCTGTATGGGCAACCTGGAGCCCATTCTCCACACTGCCAATGTGGATTAATTCCTCACTCTCCGGCCTCTCTGATTTATCGATGATGGTCAGGACACTGCGGCAGGAAGACATCGAAATTCTTGCAAATCTCCTCATGCTTCGTTCTGTGGATTTGGAAGTGGTAGAAGCCACTGGAACAAGGCTGCATATCAATGGCAGTGTAGGTGGTACTGGCCATGCAACAGCATTCCAATGTCTAGGAAACCTCAAGTTTGCAAGCCGTGCAATGGGGCTGGTATTCAGACCAGGAGCCATGCAGAAGCTTCAGAAGCTATATCTTTGCTTTGATGTTGCAGAGACAAAAGATGTTCATGGTGATTTCGACTTTGGGTTTCCCGGCTTGCAGAATCTCACCTCCCTTAAGACCGTGAACGTGGAACTTGACTGTCGCTGCTCCAGGCTCTGGGAAGTTGAGGCTGCAGATGCTGCATTGCGTAATGCAACCAACCTTAATCCCAACCGTCCAACTCTTGATTTGGAGAGGCATTTCGAAGGAGAGATGCTATTTGATCAACAGGAAGAGATCCCTGACAAAGTACAAGCAAACAAGAAAGAAGATGCTCTACTTTCCAGAGTTGGGCCTTTTGGTGGAAACGGTGGGAGGGCCCATGACATCCGGGTAGCACCCCACCGTCTGGAAGACGTGACAATTCACAGTGGCACCGTCGTACATTCACTTGCATTTTCATACACTGATCATAATGGGCAGCAGCGCAGTGCAGGACCGTGGGGTAGCTGTATTGGGAGTGTTTCAACGATTCATCTTGGTCCTTCGGAGTATCTCATAAAAGTTTCTGGGACAATTGGTTCATGTTTTGCACTATCCAACCTTATAACCTCGCTTACCTTTGTCACCAATGCTGCTTCCTATGGACCTTTCGGAGAAGGTGGAGGAGATCCCTTCGTCTTTCCCGTGCAGAGCAATAGCAGCGTTGTTGGCTTCTTTGGTCGCGCAGGGGCGTACATTGACGCTATCGGTTTCTACGTTCGCCCGCTGTGA
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| Protein seq | YLIVIDDIWDEQPWKFIKCALFENKLGSKVITTTRKTEVAKLCCSSDELDGIIHQLQPLSDGDSEKLLYYKIFGKEGCPTELKDVSQKILKKCEGCPLAINAVASLLANKPAQIQGQWNSVFNSISTGLENNYGEKDMWLILSLSYNDMPAQLRDCLLYLSIFPEDYIIGRDDLIQRWIAEDLVHGRQDDNLYELGDKYFNELINRSMIQPIDVDAFGRAQACKVHDLVLDFISFLSAEEAFVTIFNGLQSFPPQLDNIHRLSLRNREGEHGIPTKRRMPNVRTLVVSSRAVNSMPSLSIFPVLRVLELEQCTERNIKGVENLVHLRYLRLTQAYHFYDYDVCINLPKGIGNLQFLQTLDLKEARIEELPSSVVQFSQLRVLEISLRKCGKIFEKHLIQCLCNAKQLEALCIFAPSLSLDFMLQVDWTPTHLRRFTAFPRQRTEHILRRGSVWATWSPFSTLPMWINSSLSGLSDLSMMVRTLRQEDIEILANLLMLRSVDLEVVEATGTRLHINGSVGGTGHATAFQCLGNLKFASRAMGLVFRPGAMQKLQKLYLCFDVAETKDVHGDFDFGFPGLQNLTSLKTVNVELDCRCSRLWEVEAADAALRNATNLNPNRPTLDLERHFEGEMLFDQQEEIPDKVQANKKEDALLSRVGPFGGNGGRAHDIRVAPHRLEDVTIHSGTVVHSLAFSYTDHNGQQRSAGPWGSCIGSVSTIHLGPSEYLIKVSGTIGSCFALSNLITSLTFVTNAASYGPFGEGGGDPFVFPVQSNSSVVGFFGRAGAYIDAIGFYVRPL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 9.941795 | 207.5444185 | 0.15593 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g28950 | SBH | 0.0 | 0.089880 | 0.041060 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023450 | SBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0427200 | RBH | 6.6683825 | 128.104786 | 0.2345625 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0433700 | SBH | 0.084204 | 0.011601 | 0.315849 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024000 | SBH | 0.841491 | 0.217777 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
