Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0398900 | OGI:11076110 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:30143229-30144058 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACATCACGGAGCAGGAGGTGGGATCCTCCTCCATCGAGGGGTAGAATGGGACGCCGCCGCCGGCGCCGGCGCGGGGGCGAAACTGCGGCTGCTGCGGCGGCGGCGGCGGCCCGGCCGCCTTCTTGCCTCTCCTCCGTTTGCCTCCCTTCCCTCCGTTCTGCTGCTGCCCGCCGCCCTTGTTCCATCCACCATTGTTGTTGCCGTTCTTGCCGGTGTTGAAGATCTCCCGCTGCGACTGCGTCGACGAAACAATGGAGAAGAAGATTGGTCAGCTCAGCTCGATCAATTGGATAAAGAAAAAAACTAGGATTAGTTTGATGATTCATCATCCATGTGTCTTACTGAGTTGTTTGCGCGGCGTTGATTAGGTTGATCGCGAGAGCCAGCGGCGACGGCGAGCTTGTCGAGCTTCTTCTCGATGCGGCTGCCGTTCGCGGCCTGGCGGTCGATCTTCTCCTCGATGCGGACGCCATTGGCGGCCTGGAGGTCGACGAGGCAGTTGCTGATCCTGGCGTTGACGTCGGCGAACTTGGCGGCGAGCCCGTCGCCGGTGACGAGCATGAGCGGCCAGGACAGGCAGCCGCCGCCGCTCTGGCAGGACTCGACAAGCTGGAGCGCGTCGTCGAGGGCGCCCCTGAGCCGGCGCAGGATGTTCGCCGCCGTCGCGTCGCCCCTCGCCACCGCCTTGGAGTTGGAGTCCGGTAGGATCTTGGCGACCTGCTGGGCGCGCTCGGCGAGCTCCTTGCAGCTCGCCGCGTTCCGGCGAGCCGTGCTCACCGCCTTCGAGATCGCCTGCACCACTTTCACGATCGCGCCCACCGAGTCCAT
More
|
||||||||||
| CDS seq | ATGGACTCGGTGGGCGCGATCGTGAAAGTGGTGCAGGCGATCTCGAAGGCGGTGAGCACGGCTCGCCGGAACGCGGCGAGCTGCAAGGAGCTCGCCGAGCGCGCCCAGCAGGTCGCCAAGATCCTACCGGACTCCAACTCCAAGGCGGTGGCGAGGGGCGACGCGACGGCGGCGAACATCCTGCGCCGGCTCAGGGGCGCCCTCGACGACGCGCTCCAGCTTGTCGAGTCCTGCCAGAGCGGCGGCGGCTGCCTGTCCTGGCCGCTCATGCTCGTCACCGGCGACGGGCTCGCCGCCAAGTTCGCCGACGTCAACGCCAGGATCAGCAACTGCCTCGTCGACCTCCAGGCCGCCAATGGCGTCCGCATCGAGGAGAAGATCGACCGCCAGGCCGCGAACGGCAGCCGCATCGAGAAGAAGCTCGACAAGCTCGCCGTCGCCGCTGGCTCTCGCGATCAACCTAATCAACGCCGCGCAAACAACTCATCGCAGCGGGAGATCTTCAACACCGGCAAGAACGGCAACAACAATGGTGGATGGAACAAGGGCGGCGGGCAGCAGCAGAACGGAGGGAAGGGAGGCAAACGGAGGAGAGGCAAGAAGGCGGCCGGGCCGCCGCCGCCGCCGCAGCAGCCGCAGTTTCGCCCCCGCGCCGGCGCCGGCGGCGGCGTCCCATTCTACCCCTCGATGGAGGAGGATCCCACCTCCTGCTCCGTGATGTGA
More
|
||||||||||
| Protein seq | MDSVGAIVKVVQAISKAVSTARRNAASCKELAERAQQVAKILPDSNSKAVARGDATAANILRRLRGALDDALQLVESCQSGGGCLSWPLMLVTGDGLAAKFADVNARISNCLVDLQAANGVRIEEKIDRQAANGSRIEKKLDKLAVAAGSRDQPNQRRANNSSQREIFNTGKNGNNNGGWNKGGGQQQNGGKGGKRRRGKKAAGPPPPPQQPQFRPRAGAGGGVPFYPSMEEDPTSCSVM |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0398900 | OsMH63_11T0398900.1 | Chr11 | 30143229 | 30144058 | - | maker | ||
| CDS seq | ATGGACTCGGTGGGCGCGATCGTGAAAGTGGTGCAGGCGATCTCGAAGGCGGTGAGCACGGCTCGCCGGAACGCGGCGAGCTGCAAGGAGCTCGCCGAGCGCGCCCAGCAGGTCGCCAAGATCCTACCGGACTCCAACTCCAAGGCGGTGGCGAGGGGCGACGCGACGGCGGCGAACATCCTGCGCCGGCTCAGGGGCGCCCTCGACGACGCGCTCCAGCTTGTCGAGTCCTGCCAGAGCGGCGGCGGCTGCCTGTCCTGGCCGCTCATGCTCGTCACCGGCGACGGGCTCGCCGCCAAGTTCGCCGACGTCAACGCCAGGATCAGCAACTGCCTCGTCGACCTCCAGGCCGCCAATGGCGTCCGCATCGAGGAGAAGATCGACCGCCAGGCCGCGAACGGCAGCCGCATCGAGAAGAAGCTCGACAAGCTCGCCGTCGCCGCTGGCTCTCGCGATCAACCTAATCAACGCCGCGCAAACAACTCATCGCAGCGGGAGATCTTCAACACCGGCAAGAACGGCAACAACAATGGTGGATGGAACAAGGGCGGCGGGCAGCAGCAGAACGGAGGGAAGGGAGGCAAACGGAGGAGAGGCAAGAAGGCGGCCGGGCCGCCGCCGCCGCCGCAGCAGCCGCAGTTTCGCCCCCGCGCCGGCGCCGGCGGCGGCGTCCCATTCTACCCCTCGATGGAGGAGGATCCCACCTCCTGCTCCGTGATGTGA
More
|
|||||||
| Protein seq | MDSVGAIVKVVQAISKAVSTARRNAASCKELAERAQQVAKILPDSNSKAVARGDATAANILRRLRGALDDALQLVESCQSGGGCLSWPLMLVTGDGLAAKFADVNARISNCLVDLQAANGVRIEEKIDRQAANGSRIEKKLDKLAVAAGSRDQPNQRRANNSSQREIFNTGKNGNNNGGWNKGGGQQQNGGKGGKRRRGKKAAGPPPPPQQPQFRPRAGAGGGVPFYPSMEEDPTSCSVM
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.2253295 | 18.945259 | 0.018374 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0664400 | RBH | 0.283268 | 0.296993 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44300 | RBH | 0.191561 | 0.199753 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0664400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022900 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022940 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022700 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022330 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022580 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0399800 | RBH | 1.155387 | 22.4294395 | 0.0280745 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0419400 | RBH | 0.3120395 | 6.30243 | 0.2023255 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023030 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023210 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022470 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022360 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022720 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023160 | RBH | 0.0 | 0.0 | 0.0 |
