Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0364200 | OGI:11069680 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:27499821-27501864 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGAGGACTAATCAAGATGGGTTAGGTCGGTCAGTTACAATAAGTGATGAGGAGATAGGCTTACTGGATGGAGATCAAACTTTAGTTCAGCAAACTGAACTAAATGTTTCAGAACGTTTCAGTGCCTTACTATGGATGCCTCATTGCCAGCACAAAATCTCAAAAGTTTGGGAAAATGTAAGCGCTTCTGTCATATACCTTTCCAAAAAAAATGATTGGACTAATTTGTATCCTACGTATGCAGGCTAATGATGGTGTTAGTGTCAGGTATCACCACGTGGGCATTCCATACCATTATTTATGTGAACCACTACTGAAGAGACTTGGATTCTATCAAGTTTCCCAGATGGTTGGGATGAGTGTTGATAGATTTCTAATTGGAGCATTAGTAGAGAGATGGTGGCCTGAGACTAACACATTTCACTTACCAGTTGGAGAGATGACAGTTAGCCTACAAGATGTGAGTTGTCTATGGGGCTTACCAATTCAAGGTGAGCCTATTATAGGCAAGTCAGAGGGGCCATGGGTTGATGAAATTGAGACATTACTAGGAGTTACTCCAGGAAAACAAGTGATGAAGCAAAAAAAAGCGAAAGGCGGACGGTGACTTGGAAAGCGGGGGAAAGATGACATCTTCTGACTACTCCATTAGCTTAAAGAAATTACGAGATCAGTTCAAGGAGATGCCAGAAAATGCAACAAAAGAACAAATTGAGCATTACACCAGGGCATTCATTTTGGATGTTCTTGGGTCAATTATTTTCCCGGATACATCAGGAGATGGAGTGCCTGCAATGTACTTGCAATTCCTTCAGGATCTTGATAAACCAAAGGAGTACAACTGGGGGCAGCAACTCTTGCCGTGCTATATAGACAATTAAGCTTCGGTGCAGAACGAGAGAGATTGGAGATGGCTGGTCCATTAGTGCTTCTGCAGCATTGGTGTTGGTCGCGGTTGAGACCAGGACGACCAGTGGATCAAGATAGGAACCCTATTAGTTGGGGAGAGCCAGACCCTGAGAGTTGTCCTACATTTGGAGCAAAATGGTGTGGCCAGGAACTTTATCCTCTGCCACATAACTTGGGTGTTGCGTTTTATCGGAACTTGCTGGATCAAGTTCAAGATAATGCGGTCTCTTGGGAACCATATAATGGACTATTGATGTCCATGCCAAGAAGAGTTAGAGCTGAATGTGCTTTCTGGTATAGTCGAGTACCTCTCATCCATTTTTGGATCATTGAATTTCATTATCCAGATAGAGTGATGAGACAACTAGGGAGAAAGCAAACCATTCCACCTCCTCCCCCACATGATGAGAGCAAGCTTCGTTAACTCCATAAAATAAATCATACAGGGAAACCACGTGATTGGAGGAAGCTCCACGCAGAATATGTTAACCAATACAATAGAATTTGGCAAAGCATGGTTGATGAGGAGCAACATTTTGACCAGGCAAGTTTGCCACAATATCGTCATTGGTTTCAACAGTATGGGATGTACACTGTTTTTTGGATGCTCGGTCCGCTCAAGGTTTGCGGGATCCCATCCCTTATCCACTGGATAACTTCGATTGGACCGGTTACATGCCCAGTGGTCCACCTCTCTCCTGATTGATATACTAACATTTCTTTACTTGTTCTTTTTTACTTGCAATAATTCACTTAATAACACTTCTTTTTTCTTAAAATGCTAATTTAGGCTCTACGTTCTATCAAACAAGTTGTGTGGGGAATTAAATGTGCTATGAGCAGAGGATGGAGAAAGATGGGCAAGATTCTTATCTGTACATGTTACAATAACGTCCAGGATATCAATATGGAGGCTAAGTTAAGAAGCATGCTAAGCGAGTCAGGTCTACCTTTATGTGTAGATGACATTCAATCTGATGATAGTGCATCACCATTTTCTACCCCTAAACCAATTAAACCTGAGGAGATAAACATGGATGTGATGGATGACTGGTTGTACTCAAACAGGGGATTTACAAGATACCTTAGTTTAGGTACATATTCTGATGTGCTGGAATCTCAGGATAAACATTGA
More
|
||||||||||
| CDS seq | ATGAGGACTAATCAAGATGGGTTAGGTCGGTCAGTTACAATAAGTGATGAGGAGATAGGCTTACTGGATGGAGATCAAACTTTAGTTCAGCAAACTGAACTAAATGTTTCAGAACGTTTCAGTGCCTTACTATGGATGCCTCATTGCCAGCACAAAATCTCAAAAGTTTGGGAAAATGCTAATGATGGTGTTAGTGTCAGGTATCACCACGTGGGCATTCCATACCATTATTTATGTGAACCACTACTGAAGAGACTTGGATTCTATCAAGTTTCCCAGATGGTTGGGATGAGTGTTGATAGATTTCTAATTGGAGCATTAGTAGAGAGATGGTGGCCTGAGACTAACACATTTCACTTACCAGTTGGAGAGATGACAGTTAGCCTACAAGATGTGAGTTGTCTATGGGGCTTACCAATTCAAGGTGAGCCTATTATAGGCAAGTCAGAGGGGCCATGGGTTGATGAAATTGAGACATTACTAGGAGTTACTCCAGGAAAACAAGTGATGAACTTAAAGAAATTACGAGATCAGTTCAAGGAGATGCCAGAAAATGCAACAAAAGAACAAATTGAGCATTACACCAGGGCATTCATTTTGGATGTTCTTGGGTCAATTATTTTCCCGGATACATCAGGAGATGGAGTGCCTGCAATGTACTTGCAATTCCTTCAGGATCTTGATAAACCAAAGGACTTCGGTGCAGAACGAGAGAGATTGGAGATGGCTGGTCCATTAGTGCTTCTGCAGCATTGGTGTTGGTCGCGGTTGAGACCAGGACGACCAGTGGATCAAGATAGGAACCCTATTAGTTGGGGAGAGCCAGACCCTGAGAGTTGTCCTACATTTGGAGCAAAATGGTGTGGCCAGGAACTTTATCCTCTGCCACATAACTTGGGTGTTGCGTTTTATCGGAACTTGCTGGATCAAGTTCAAGATAATGCGGTCTCTTGGGAACCATATAATGGACTATTGATGTCCATGCCAAGAAGAGTTAGAGCTGAATGTGCTTTCTGGTATAGTCGAGTACCTCTCATCCATTTTTGGATCATTGAATTTCATTATCCAGATAGAGTGATGAGACAACTAGGGAGAAAGCAAACCATTCCACCTCCTCCCCCACATGATGAGAGGAAACCACGTGATTGGAGGAAGCTCCACGCAGAATATGTTAACCAATACAATAGAATTTGGCAAAGCATGGTTGATGAGGAGCAACATTTTGACCAGGCAAGTTTGCCACAATATCGTCATTGGTTTCAACAGTATGGGATGTACACTGTTTTTTGGATGCTCGGTCCGCTCAAGGATATCAATATGGAGGCTAAGTTAAGAAGCATGCTAAGCGAGTCAGGTCTACCTTTATGTGTAGATGACATTCAATCTGATGATAGTGCATCACCATTTTCTACCCCTAAACCAATTAAACCTGAGGAGATAAACATGGATGTGATGGATGACTGGTTGTACTCAAACAGGGGATTTACAAGATACCTTAGTTTAGGTACATATTCTGATGTGCTGGAATCTCAGGATAAACATTGA
More
|
||||||||||
| Protein seq | MRTNQDGLGRSVTISDEEIGLLDGDQTLVQQTELNVSERFSALLWMPHCQHKISKVWENANDGVSVRYHHVGIPYHYLCEPLLKRLGFYQVSQMVGMSVDRFLIGALVERWWPETNTFHLPVGEMTVSLQDVSCLWGLPIQGEPIIGKSEGPWVDEIETLLGVTPGKQVMNLKKLRDQFKEMPENATKEQIEHYTRAFILDVLGSIIFPDTSGDGVPAMYLQFLQDLDKPKDFGAERERLEMAGPLVLLQHWCWSRLRPGRPVDQDRNPISWGEPDPESCPTFGAKWCGQELYPLPHNLGVAFYRNLLDQVQDNAVSWEPYNGLLMSMPRRVRAECAFWYSRVPLIHFWIIEFHYPDRVMRQLGRKQTIPPPPPHDERKPRDWRKLHAEYVNQYNRIWQSMVDEEQHFDQASLPQYRHWFQQYGMYTVFWMLGPLKDINMEAKLRSMLSESGLPLCVDDIQSDDSASPFSTPKPIKPEEINMDVMDDWLYSNRGFTRYLSLGTYSDVLESQDKH |
||||||||||
| Function | Serine/threonine-protein phosphatase 7 long form homolog [UniProtKB/Swiss-Prot:Q9LNG5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0364200 | OsMH63_11T0364200.1 | Chr11 | 27499821 | 27501864 | + | maker | ||
| CDS seq | ATGAGGACTAATCAAGATGGGTTAGGTCGGTCAGTTACAATAAGTGATGAGGAGATAGGCTTACTGGATGGAGATCAAACTTTAGTTCAGCAAACTGAACTAAATGTTTCAGAACGTTTCAGTGCCTTACTATGGATGCCTCATTGCCAGCACAAAATCTCAAAAGTTTGGGAAAATGCTAATGATGGTGTTAGTGTCAGGTATCACCACGTGGGCATTCCATACCATTATTTATGTGAACCACTACTGAAGAGACTTGGATTCTATCAAGTTTCCCAGATGGTTGGGATGAGTGTTGATAGATTTCTAATTGGAGCATTAGTAGAGAGATGGTGGCCTGAGACTAACACATTTCACTTACCAGTTGGAGAGATGACAGTTAGCCTACAAGATGTGAGTTGTCTATGGGGCTTACCAATTCAAGGTGAGCCTATTATAGGCAAGTCAGAGGGGCCATGGGTTGATGAAATTGAGACATTACTAGGAGTTACTCCAGGAAAACAAGTGATGAACTTAAAGAAATTACGAGATCAGTTCAAGGAGATGCCAGAAAATGCAACAAAAGAACAAATTGAGCATTACACCAGGGCATTCATTTTGGATGTTCTTGGGTCAATTATTTTCCCGGATACATCAGGAGATGGAGTGCCTGCAATGTACTTGCAATTCCTTCAGGATCTTGATAAACCAAAGGACTTCGGTGCAGAACGAGAGAGATTGGAGATGGCTGGTCCATTAGTGCTTCTGCAGCATTGGTGTTGGTCGCGGTTGAGACCAGGACGACCAGTGGATCAAGATAGGAACCCTATTAGTTGGGGAGAGCCAGACCCTGAGAGTTGTCCTACATTTGGAGCAAAATGGTGTGGCCAGGAACTTTATCCTCTGCCACATAACTTGGGTGTTGCGTTTTATCGGAACTTGCTGGATCAAGTTCAAGATAATGCGGTCTCTTGGGAACCATATAATGGACTATTGATGTCCATGCCAAGAAGAGTTAGAGCTGAATGTGCTTTCTGGTATAGTCGAGTACCTCTCATCCATTTTTGGATCATTGAATTTCATTATCCAGATAGAGTGATGAGACAACTAGGGAGAAAGCAAACCATTCCACCTCCTCCCCCACATGATGAGAGGAAACCACGTGATTGGAGGAAGCTCCACGCAGAATATGTTAACCAATACAATAGAATTTGGCAAAGCATGGTTGATGAGGAGCAACATTTTGACCAGGCAAGTTTGCCACAATATCGTCATTGGTTTCAACAGTATGGGATGTACACTGTTTTTTGGATGCTCGGTCCGCTCAAGGATATCAATATGGAGGCTAAGTTAAGAAGCATGCTAAGCGAGTCAGGTCTACCTTTATGTGTAGATGACATTCAATCTGATGATAGTGCATCACCATTTTCTACCCCTAAACCAATTAAACCTGAGGAGATAAACATGGATGTGATGGATGACTGGTTGTACTCAAACAGGGGATTTACAAGATACCTTAGTTTAGGTACATATTCTGATGTGCTGGAATCTCAGGATAAACATTGA
More
|
|||||||
| Protein seq | MRTNQDGLGRSVTISDEEIGLLDGDQTLVQQTELNVSERFSALLWMPHCQHKISKVWENANDGVSVRYHHVGIPYHYLCEPLLKRLGFYQVSQMVGMSVDRFLIGALVERWWPETNTFHLPVGEMTVSLQDVSCLWGLPIQGEPIIGKSEGPWVDEIETLLGVTPGKQVMNLKKLRDQFKEMPENATKEQIEHYTRAFILDVLGSIIFPDTSGDGVPAMYLQFLQDLDKPKDFGAERERLEMAGPLVLLQHWCWSRLRPGRPVDQDRNPISWGEPDPESCPTFGAKWCGQELYPLPHNLGVAFYRNLLDQVQDNAVSWEPYNGLLMSMPRRVRAECAFWYSRVPLIHFWIIEFHYPDRVMRQLGRKQTIPPPPPHDERKPRDWRKLHAEYVNQYNRIWQSMVDEEQHFDQASLPQYRHWFQQYGMYTVFWMLGPLKDINMEAKLRSMLSESGLPLCVDDIQSDDSASPFSTPKPIKPEEINMDVMDDWLYSNRGFTRYLSLGTYSDVLESQDKH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.007229 | 0.0220815 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0534500 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g40630 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0534500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0020680 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0020750 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0020540 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0020080 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0020610 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0449000 | RBH | 0.0084805 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0021090 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0382600 | RBH | 0 | 0 | 0.1159115 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020890 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0021030 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0020750 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0020340 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0020460 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G020410 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020780 | RBH | 0.0 | 0.0 | 0.0 |
