Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0349700 | OGI:11066310 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:26156425-26159042 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTATCCAGATGGACTAGCATCTGCGCCGCTTGGAACTTCTGCATTCTTCGGGCATTTCTTGTAAGTATGGCCGCGCAGATCACACTTGCTGCAGCGTAAAGTCCTCCCACCTGCTTCTGACTCATCCATATCATTTCTGATGCGTCTAGTTTGGCATCGACCCTTTTTCACCCTTAACTTAGATGGATCTGGAATATATAAAACTTGGGCACTCAGCGTTGTGTAAGATCCTGAGATCCCGAACCCATATATCTCCTCACTCCATGTATGAAAGATTGCTTCTTTCCTGAAATAATTTGAGACGTACACATTGGGAGATATGCCACAATCACCGGCAGCAGCAAGAACGTGTGAGCAAGGAAGGTGATGAAGCTTCGGCTTCATACAACTGCAGGTACATCCACCATCGGCCTTCAAGACACATTCCTGCACGGCTTGCTTGCGATAGATACCACGCCTGCTCCTATCAACACACATTATTTCATACCGATGCACTTTTGTGCCTTGAGCAACAACTCTATGTCTCCGTGCCTTTTTGATTTTATCTTCCATGTACTTTGTCACTACGTTGCCAAACACTATGTTGTTATCGGCCATGGACGGACCAATTTTCTTGTATCGATCCCTAAAGTAGGCTTGCGTGCCGTGAAGGATGAATTCAACAATAGCAACCAATGGAAGTACCCGAACTCCTCGCATTACCCAGTTGTACACCTCTGCCAAATTGGTTGTCATTATGCCATACCGAGATCCATCGGTGTCGAACAATAGAGACCACTTCTCCTTAGGCTCATTCTCAATCCACTGAGAGAAATTTCTGATGGACGACCCTGACCTCCTTTTCATTGTTGGTGGGTCATCATGTAATGCACCAAGAGGTATGGGAGGCTCGTCACCTTCAACTTGTGGTCTGCGAGATTGCTCATCTGTTTGCTTCGTTGTCAACTCATCCAACTTGTCCCACAACTCATTAAATTTCTTCTCTTGGTTCTGTGCACAGAGCCTCTTAAAGAGCTCCATAAGATGCTTGTTCTTGAATTGCTTGTAGAAATTTGCACCCATGTGACGCATGCACCACCGACTCCGAACATCAGGCCACTTAGCTGGAAGTCCCTTCTCATCCCAACCGTTCTGCAAGTAGTCAATAGCCCGCAACATACCCGCATGACGATCATGTATAAGGCAAACGTTGGGCCTCATACGCACCACTGCAATGTGCACTCTCTCTAGGAACCAGTACCAGCTTTCAGTGTTCTCACTCTCTACAAATGCAAAAGCCATAGGTAGAACCTGGTTGTTCCCATCACACCCAATTGCTGTCAATATCTGACTCGGTATTTACCTGTCATAAAAGTTCCATCTATGCATACAACAGGTCGACAATGCACAAAAGCATTGATGCAAGCACCCAATGAGAAAAATGCTCTTTGCAGCACACTCTTTGTTCGATCATCAACCGATGTAAATGTATGTAGGTCATAGTAAGTATTATTATTCCTCTGGGCAATGGTGGCTAACAAACGAGGCAAATTATCATAAGAAGCTTCAAATGTGCCATACCTCATCTCAATGATCTTTTGTTTGGCTCTCCAGGCCTTTGCATAGCTTATGGTGTACTTGAATTTGTTCTCGATGTGCCTAATAATTGATTTTGGTTCAAAGCCAATGTTACCAACAACACTGCTGTACATCTCACTTGCCACGAAAGCTGAAGTGATGTTTCGGTGATACTTCTCCACCCCTTGTAAGTAGCACTTGTGCTCGGTCACAATGCTAACTTTCCAATAATCATTCCATTTACCCTTATATGCATGGACACGCCACGGACAATCTTTCTTCATGCACCTCACTTCATACACATAATTTGTTGACTTGACCACCCTAAACTCTCTCTGCAATGAAACTGCCCAATGCTTCACCGCCTCCTTCATCTCATCCTTATGAGCATACCTCGCACCCTCAATTACCTCGTTCTCCTTATACTCCCAGGGTACATGATCACCCTCTGATATAACAAGTCCAGAGAAGTCCTCATTTGCCCAATCAGTGGCCATTACATCACCTTCCTCATCGGATGATGCGTCGTCCTCCGCTTGCTCATTATCCGAATCTTCCCTCTCCATTTCATCAACAATTATACCGACTCTCTCCCCCTCATCCGCCATGCCCATGGCCTGCTCCTCCCTTGGTTGATTTTCCTCATTTTCCATAGATGGTCCAACAACATCCCCTGCATTGCTAGGACCCACCACATCTTCGGTTTGCATTGAAACATTTGTATCTTTCTCTTGTACCGACACAAATATAACGAGGGGCCATGACCGTTCAAAAGCCATTTCCACGTACCGTCTCCAAGCAGCAGTGCTGTCCATCGGCATTAGTTCCCAAAAATAACCTTCTATTGCACGACTCACTACAACAGATACTGACATTGTGTAGACTTCTTGGTCTATTCTAAATCCTCTCAACAACAAACTATAAATTGACTGAAATGTTCTCTCCGCAGGCCTATCGATGCCCTTAGATGTCATTACAAAATCTGACAGATCAACACCATCTGGACCAAATCTAATATTTCCTTCACCGTGAACTATCTGAAATGTGACCTTACTTGACAT
More
|
||||||||||
| CDS seq | ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTTGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTATCTGTTGTAGTGAGTCGTGCAATAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGCTGCTTGGAGACGGTACGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATACAAATGTTTCAATGCAAACCGAAGATGTGGTGGGTCCTAGCAATGCAGGGGATGTTGTTGGACCATCTATGGAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGCAAGCGGAGGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCGAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCATTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGAAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTCGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCATTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTGTATGCATAGATGGAACTTTTATGACAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATGTTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAAAAGGAGGTCAGGGTCGTCCATCAGAAATTTCTCTCAGTGGATTGAGAATGAGCCTAAGGAGAAGTGGTCTCTATTGTTCGACACCGATGGATCTCGGTATGGCATAATGACAACCAATTTGGCAGAGGTGTACAACTGGGTAATGCGAGGAGTTCGGGTACTTCCATTGGTTGCTATTGTTGAATTCATCCTTCACGGCACGCAAGCCTACTTTAGGGATCGATACAAGAAAATTGGTCCGTCCATGGCCGATAACAACATAGTGTTTGGCAACGTAGTGACAAAGTACATGGAAGATAAAATCAAAAAGGCACGGAGACATAGAGTTGTTGCTCAAGGCACAAAAGTGCATCGGTATGAAATAATGTGTGTTGATAGGAGCAGGCGTGGTATCTATCGCAAGCAAGCCGTGCAGGAATGTGTCTTGAAGGCCGATGGTGGATGTACCTGCAGTTGTATGAAGCCGAAGCTTCATCACCTTCCTTGCTCACACGTTCTTGCTGCTGCCGGTGATTGTGGCATATCTCCCAATGTGTACGTCTCAAATTATTTCAGGAAAGAAGCAATCTTTCATACATGGAGTGAGGAGATATATGGGTTCGGGATCTCAGGATCTTACACAACGCTGAGTGCCCAAGTTTTATATATTCCAGATCCATCTAAGTTAAGGGTGAAAAAGGGTCGATGCCAAACTAGACGCATCAGAAATGATATGGATGAGTCAGAAGCAGGTGGGAGGACTTTACGCTGCAGCAAGTGTGATCTGCGCGGCCATACTTACAAGAAATGCCCGAAGAATGCAGAAGTTCCAAGCGGCGCAGATGCTAGTCCATCTGGATAG
More
|
||||||||||
| Protein seq | MSSKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIDRPAERTFQSIYSLLLRGFRIDQEVYTMSVSVVVSRAIEGYFWELMPMDSTAAWRRYVEMAFERSWPLVIFVSVQEKDTNVSMQTEDVVGPSNAGDVVGPSMENEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEQAEDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKKDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVVCIDGTFMTESENTESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDVRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPQVEGDEPPIPLGALHDDPPTMKRRSGSSIRNFSQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTKVHRYEIMCVDRSRRGIYRKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHTWSEEIYGFGISGSYTTLSAQVLYIPDPSKLRVKKGRCQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKCPKNAEVPSGADASPSG |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0349700 | OsMH63_11T0349700.1 | Chr11 | 26156425 | 26159042 | - | maker | ||
| CDS seq | ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTTGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTATCTGTTGTAGTGAGTCGTGCAATAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGCTGCTTGGAGACGGTACGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATACAAATGTTTCAATGCAAACCGAAGATGTGGTGGGTCCTAGCAATGCAGGGGATGTTGTTGGACCATCTATGGAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGCAAGCGGAGGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCGAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCATTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGAAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTCGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCATTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTGTATGCATAGATGGAACTTTTATGACAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATGTTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAAAAGGAGGTCAGGGTCGTCCATCAGAAATTTCTCTCAGTGGATTGAGAATGAGCCTAAGGAGAAGTGGTCTCTATTGTTCGACACCGATGGATCTCGGTATGGCATAATGACAACCAATTTGGCAGAGGTGTACAACTGGGTAATGCGAGGAGTTCGGGTACTTCCATTGGTTGCTATTGTTGAATTCATCCTTCACGGCACGCAAGCCTACTTTAGGGATCGATACAAGAAAATTGGTCCGTCCATGGCCGATAACAACATAGTGTTTGGCAACGTAGTGACAAAGTACATGGAAGATAAAATCAAAAAGGCACGGAGACATAGAGTTGTTGCTCAAGGCACAAAAGTGCATCGGTATGAAATAATGTGTGTTGATAGGAGCAGGCGTGGTATCTATCGCAAGCAAGCCGTGCAGGAATGTGTCTTGAAGGCCGATGGTGGATGTACCTGCAGTTGTATGAAGCCGAAGCTTCATCACCTTCCTTGCTCACACGTTCTTGCTGCTGCCGGTGATTGTGGCATATCTCCCAATGTGTACGTCTCAAATTATTTCAGGAAAGAAGCAATCTTTCATACATGGAGTGAGGAGATATATGGGTTCGGGATCTCAGGATCTTACACAACGCTGAGTGCCCAAGTTTTATATATTCCAGATCCATCTAAGTTAAGGGTGAAAAAGGGTCGATGCCAAACTAGACGCATCAGAAATGATATGGATGAGTCAGAAGCAGGTGGGAGGACTTTACGCTGCAGCAAGTGTGATCTGCGCGGCCATACTTACAAGAAATGCCCGAAGAATGCAGAAGTTCCAAGCGGCGCAGATGCTAGTCCATCTGGATAG
More
|
|||||||
| Protein seq | MSSKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIDRPAERTFQSIYSLLLRGFRIDQEVYTMSVSVVVSRAIEGYFWELMPMDSTAAWRRYVEMAFERSWPLVIFVSVQEKDTNVSMQTEDVVGPSNAGDVVGPSMENEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEQAEDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKKDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVVCIDGTFMTESENTESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDVRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPQVEGDEPPIPLGALHDDPPTMKRRSGSSIRNFSQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTKVHRYEIMCVDRSRRGIYRKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHTWSEEIYGFGISGSYTTLSAQVLYIPDPSKLRVKKGRCQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKCPKNAEVPSGADASPSG
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0106925 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g33080 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0016160 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0016110 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0016080 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0015650 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0016070 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0343300 | SBH | 0 | 0.5426795 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0016330 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0318400 | SBH | 0.009384 | 0 | 0.002247 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0016280 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0016260 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0015900 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0015690 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0020470 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G015790 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020790 | SBH | 0.0 | 0.0 | 0.0 |
