Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_11G0255500 OGI:11048460 | 3/16 Minghui 63 | MH63RS3 | HZAU Chr11:19383893-19385305
Gene Symbol -
DNA seq

ATGGTGAACACGCGCACTGGAAGTGGAAGTGGAAGTGGAAGTGGAGCTACTAACAATGGAGGAGATCCCACGTTAGCTCAGATTTTGGCCCAACAAACACAACTGATCAATCTGTTAGTGCAGCAGGCACAGAATCAGCAGGCAAACAATCAGAACCAGAATCCACCCCCACCTCCCCAAAACAAGCTGGCAGATTTCTTACGTGTGAGACCCCCTACCTTTTCAAGCACCACCAATCCAGTAGAAGCAGGAGATTGGCTGCACGCGGTGGAGAAGATGTTGGATTTGATCCAGTGTACTGAGCAGGAGAAAGATTCTTTTGCTTCGCATCAATTGCATGGTCCTGCTGCTGAATGGTGGGATCATTTTCGCCAAGGCAGGGCTGAAGGAGAGCCTATTACGTGGCAGGAGTTTACGGCTGCTTTCAAGAAGACGCACATACCAACGGGTGTTGTAGCTCTAAAGAAGAGAGAATTTAGAGCACTCAACTAGGGATCTCGTTCGGTCACCGAGTACCTCCATGATTTCAACCGTTTAGCTCGCTATGCTCCAGAGGATGTTCGCACCGATGAACAGCGTCAGGAGAAGTTTTTAGAGGGACTGAATGATGAGTTGTCTTATGCCTTGATGTCTACGGATTTTCGGGATTTCCAGCAGTTGGTGGACAAGGCGATTCGTCAGGAAGACAAGTATAACCGGATGGAGCTGAAGAAGCGCAGGGCTGCCCAATTCAAGGCACAACAGGGCAGTAACAAGAGGCCGCGTCTCGTTACTGGACCTCAAGCTCCATCGTACCCTCAAGGAGGATCTTCATCAGTTATCCGCCCCCAACGCCAGTTCTACAACAACAATACTGGTAATCGTGGCAATGACAACCGCAACATGGTTGCTCGTCCTGCAGCAACTCCAGCTCAGAATCAGCCCGTCAGGAAGGAACAGGGAAGCAAGCCAGTGGTGTGCTTCAATTGTGGTGATCCAGGACATTATGCTGATAAGTGTCCTAAGCCTCGGCGCGTGAAGAACGCTCCAGCCCCGAACAACTCCAATGCTCCAGCACCGAAGGCATGTGTTAATCATGTTGCAGCAGCAGAAGCTCAGAATGCACCAGATGTGGTTTTGGGTACATTTCCTGTTAACTCTATACCCGCAACTGTGCTTTTTGATTCCGGTGCTACACATTCCTTTTTGTCTAAAAGTTTTGCGAGCAATCATGGGATGGAAGTTATTAGTCTTGGGAGACCTTTACTAGTTAATACCCCAGGCAATCAAGTATTTTCGACACAGTATTGTCCTTCCGCTACTATAGAAATAGAAGAAGTTCTTTTCCCATCCTCGCTTATCTTGCTAGAATCCAAAGATCTAGATGTTATCTTAGGGATGGACTGGTCATCTCGTCTGGAGGAGTGGCAGTAG

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CDS seq

ATGGTGAACACGCGCACTGGAAGTGGAAGTGGAAGTGGAAGTGGAGCTACTAACAATGGAGGAGATCCCACGTTAGCTCAGATTTTGGCCCAACAAACACAACTGATCAATCTGTTAGTGCAGCAGGCACAGAATCAGCAGGCAAACAATCAGAACCAGAATCCACCCCCACCTCCCCAAAACAAGCTGGCAGATTTCTTACGTGTGAGACCCCCTACCTTTTCAAGCACCACCAATCCAGTAGAAGCAGGAGATTGGCTGCACGCGGTGGAGAAGATGTTGGATTTGATCCAGTGTACTGAGCAGGAGAAAGATTCTTTTGCTTCGCATCAATTGCATGGTCCTGCTGCTGAATGGTGGGATCATTTTCGCCAAGGCAGGGCTGAAGGAGAGCCTATTACGTGGCAGGAGTTTACGGCTGCTTTCAAGAAGACGCACATACCAACGGGTGTTGGATCTCGTTCGGTCACCGAGTACCTCCATGATTTCAACCGTTTAGCTCGCTATGCTCCAGAGGATGTTCGCACCGATGAACAGCGTCAGGAGAAGTTTTTAGAGGGACTGAATGATGAGTTGTCTTATGCCTTGATGTCTACGGATTTTCGGGATTTCCAGCAGTTGGTGGACAAGGCGATTCGTCAGGAAGACAAGTATAACCGGATGGAGCTGAAGAAGCGCAGGGCTGCCCAATTCAAGGCACAACAGGGCAGTAACAAGAGGCCGCGTCTCGTTACTGGACCTCAAGCTCCATCGTACCCTCAAGGAGGATCTTCATCAGTTATCCGCCCCCAACGCCAGTTCTACAACAACAATACTGGTAATCGTGGCAATGACAACCGCAACATGGTTGCTCGTCCTGCAGCAACTCCAGCTCAGAATCAGCCCGTCAGGAAGGAACAGGGAAGCAAGCCAGTGGTGTGCTTCAATTGTGGTGATCCAGGACATTATGCTGATAAGTGTCCTAAGCCTCGGCGCGTGAAGAACGCTCCAGCCCCGAACAACTCCAATGCTCCAGCACCGAAGGCATGTGTTAATCATGTTGCAGCAGCAGAAGCTCAGAATGCACCAGATGTGGTTTTGGGGATGGACTGGTCATCTCGTCTGGAGGAGTGGCAGTAG

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Protein seq

MVNTRTGSGSGSGSGATNNGGDPTLAQILAQQTQLINLLVQQAQNQQANNQNQNPPPPPQNKLADFLRVRPPTFSSTTNPVEAGDWLHAVEKMLDLIQCTEQEKDSFASHQLHGPAAEWWDHFRQGRAEGEPITWQEFTAAFKKTHIPTGVGSRSVTEYLHDFNRLARYAPEDVRTDEQRQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMELKKRRAAQFKAQQGSNKRPRLVTGPQAPSYPQGGSSSVIRPQRQFYNNNTGNRGNDNRNMVARPAATPAQNQPVRKEQGSKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPAPKACVNHVAAAEAQNAPDVVLGMDWSSRLEEWQ

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_11G0255500 OsMH63_11T0255500.1 Chr11 19383893 19385305 + maker
CDS seq

ATGGTGAACACGCGCACTGGAAGTGGAAGTGGAAGTGGAAGTGGAGCTACTAACAATGGAGGAGATCCCACGTTAGCTCAGATTTTGGCCCAACAAACACAACTGATCAATCTGTTAGTGCAGCAGGCACAGAATCAGCAGGCAAACAATCAGAACCAGAATCCACCCCCACCTCCCCAAAACAAGCTGGCAGATTTCTTACGTGTGAGACCCCCTACCTTTTCAAGCACCACCAATCCAGTAGAAGCAGGAGATTGGCTGCACGCGGTGGAGAAGATGTTGGATTTGATCCAGTGTACTGAGCAGGAGAAAGATTCTTTTGCTTCGCATCAATTGCATGGTCCTGCTGCTGAATGGTGGGATCATTTTCGCCAAGGCAGGGCTGAAGGAGAGCCTATTACGTGGCAGGAGTTTACGGCTGCTTTCAAGAAGACGCACATACCAACGGGTGTTGGATCTCGTTCGGTCACCGAGTACCTCCATGATTTCAACCGTTTAGCTCGCTATGCTCCAGAGGATGTTCGCACCGATGAACAGCGTCAGGAGAAGTTTTTAGAGGGACTGAATGATGAGTTGTCTTATGCCTTGATGTCTACGGATTTTCGGGATTTCCAGCAGTTGGTGGACAAGGCGATTCGTCAGGAAGACAAGTATAACCGGATGGAGCTGAAGAAGCGCAGGGCTGCCCAATTCAAGGCACAACAGGGCAGTAACAAGAGGCCGCGTCTCGTTACTGGACCTCAAGCTCCATCGTACCCTCAAGGAGGATCTTCATCAGTTATCCGCCCCCAACGCCAGTTCTACAACAACAATACTGGTAATCGTGGCAATGACAACCGCAACATGGTTGCTCGTCCTGCAGCAACTCCAGCTCAGAATCAGCCCGTCAGGAAGGAACAGGGAAGCAAGCCAGTGGTGTGCTTCAATTGTGGTGATCCAGGACATTATGCTGATAAGTGTCCTAAGCCTCGGCGCGTGAAGAACGCTCCAGCCCCGAACAACTCCAATGCTCCAGCACCGAAGGCATGTGTTAATCATGTTGCAGCAGCAGAAGCTCAGAATGCACCAGATGTGGTTTTGGGGATGGACTGGTCATCTCGTCTGGAGGAGTGGCAGTAG

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Protein seq

MVNTRTGSGSGSGSGATNNGGDPTLAQILAQQTQLINLLVQQAQNQQANNQNQNPPPPPQNKLADFLRVRPPTFSSTTNPVEAGDWLHAVEKMLDLIQCTEQEKDSFASHQLHGPAAEWWDHFRQGRAEGEPITWQEFTAAFKKTHIPTGVGSRSVTEYLHDFNRLARYAPEDVRTDEQRQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMELKKRRAAQFKAQQGSNKRPRLVTGPQAPSYPQGGSSSVIRPQRQFYNNNTGNRGNDNRNMVARPAATPAQNQPVRKEQGSKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPAPKACVNHVAAAEAQNAPDVVLGMDWSSRLEEWQ

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g26540 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0184500 SBH 0.00905 0.0020515 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0247300 RBH 0.000999 0 0.003501
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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