Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0083000 | OGI:11015440 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:5177129-5177650 | ||||||||
| Gene Symbol | OsFbox572, Os_F0135 | ||||||||||
| DNA seq | ATGAGCACAACGATAACTTTTTCTCTAGCCAAGCTGCCTCTTATCTCCCAGCGCTTGACGAGGTTAGAGCTTAGTGATGTGCCATTATTATGTGGTTTTGTTGATTCTTTGAGCTTCCCAGCACTGGAGGCCCTATGGATGAAGTTCTGCTATATAGACGGTGAGAAGATATCGTCTCAGTCACTTAAAGAGCTGACCATGATTGACTGTATATTTTTTCGCCAATTTCGGATTTCTGCTCCAAGTTTGGTGAGGTTGGAAATAACTGATTGTGTGGGTAAAGCTCCTGTGCTGGAAATAATGCCATCTCTAGTAAAGGCATTTATCAGGTTCCGAGACTCTAGAGATATTTGTGGTAAAGAAGAATTTGGGGGTAGTTGTACTAATGCTAGCTGTGATAATTGTGGTGCTAATGGTGTTGACAGTGGAGATTGTGTGCTTCTGAAGGGTATTTCAATGGCAAAAAGCTTGGAGTTGGTAGCTGAACCTGGTGCGGTATGTTTTTGCCTACTTTGTGCTTAA
More
|
||||||||||
| CDS seq | ATGAGCACAACGATAACTTTTTCTCTAGCCAAGCTGCCTCTTATCTCCCAGCGCTTGACGAGGTTAGAGCTTAGTGATGTGCCATTATTATGTGGTTTTGTTGATTCTTTGAGCTTCCCAGCACTGGAGGCCCTATGGATGAAGTTCTGCTATATAGACGGTGAGAAGATATCGTCTCAGTCACTTAAAGAGCTGACCATGATTGACTGTATATTTTTTCGCCAATTTCGGATTTCTGCTCCAAGTTTGGTGAGGTTGGAAATAACTGATTGTGTGGGTAAAGCTCCTGTGCTGGAAATAATGCCATCTCTAGTAAAGGCATTTATCAGGTTCCGAGACTCTAGAGATATTTGTGGTAAAGAAGAATTTGGGGGTAGTTGTACTAATGCTAGCTGTGATAATTGTGGTGCTAATGGTGTTGACAGTGGAGATTGTGTGCTTCTGAAGGGTATTTCAATGGCAAAAAGCTTGGAGTTGGTAGCTGAACCTGGTGCGGTATGTTTTTGCCTACTTTGTGCTTAA
More
|
||||||||||
| Protein seq | MSTTITFSLAKLPLISQRLTRLELSDVPLLCGFVDSLSFPALEALWMKFCYIDGEKISSQSLKELTMIDCIFFRQFRISAPSLVRLEITDCVGKAPVLEIMPSLVKAFIRFRDSRDICGKEEFGGSCTNASCDNCGANGVDSGDCVLLKGISMAKSLELVAEPGAVCFCLLCA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0083000 | OsMH63_11T0083000.1 | Chr11 | 5177129 | 5177650 | + | maker | ||
| CDS seq | ATGAGCACAACGATAACTTTTTCTCTAGCCAAGCTGCCTCTTATCTCCCAGCGCTTGACGAGGTTAGAGCTTAGTGATGTGCCATTATTATGTGGTTTTGTTGATTCTTTGAGCTTCCCAGCACTGGAGGCCCTATGGATGAAGTTCTGCTATATAGACGGTGAGAAGATATCGTCTCAGTCACTTAAAGAGCTGACCATGATTGACTGTATATTTTTTCGCCAATTTCGGATTTCTGCTCCAAGTTTGGTGAGGTTGGAAATAACTGATTGTGTGGGTAAAGCTCCTGTGCTGGAAATAATGCCATCTCTAGTAAAGGCATTTATCAGGTTCCGAGACTCTAGAGATATTTGTGGTAAAGAAGAATTTGGGGGTAGTTGTACTAATGCTAGCTGTGATAATTGTGGTGCTAATGGTGTTGACAGTGGAGATTGTGTGCTTCTGAAGGGTATTTCAATGGCAAAAAGCTTGGAGTTGGTAGCTGAACCTGGTGCGGTATGTTTTTGCCTACTTTGTGCTTAA
More
|
|||||||
| Protein seq | MSTTITFSLAKLPLISQRLTRLELSDVPLLCGFVDSLSFPALEALWMKFCYIDGEKISSQSLKELTMIDCIFFRQFRISAPSLVRLEITDCVGKAPVLEIMPSLVKAFIRFRDSRDICGKEEFGGSCTNASCDNCGANGVDSGDCVLLKGISMAKSLELVAEPGAVCFCLLCA |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.177307 | 0.1182 | 0.1091045 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0200950 | SBH | 2.006370 | 1.305722 | 1.189251 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g09360 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0200950 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0006400 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0006420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006420 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006310 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0006290 | RBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0083300 | SBH | 2.6366925 | 3.240256 | 2.232241 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006320 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0084300 | RBH | 0.0743505 | 0.0389665 | 1.7771065 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0006290 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0006380 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006370 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006380 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0006400 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G006400 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006220 | RBH | 0.0 | 0.0 | 0.0 |
