Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0341900 | OGI:10063390 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:22849145-22849915 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCCGTTGGTCTATGAGATCTCCAAAAATAGGAAGAAATCCCTACGGCAAGGGAAAGAAGACGACTCCTGGGTGCATGACCTGACCCTCGATGCGGGTTCATCTATCACAATCAACCTTCTCGATCAGCTAGTCCGCCTGTGGGAGGCGGTACAGAATGTGCACTTAGACAGCGAGGAGCCGGATCAGATTGTTTGGAAATTCACAAGCAGCGGCCACTATACAGCTTCCTCGGCTTATCATGCCCAATGTTTGGGGGCGCCAAACACAAACTTCAACTCCCTAATCTGGAAAGTTTGGGCGCCAGGGAAATGTAAATTTCATGCCTGGCTCATCATTCAAAATAGAGTCTGGACGTCGGACCGACTCGTGACAAGGGGTTGGCGGAATAACGGACATTGCCCCCTATGTCGTTGTGACACCGAGACAGCCTTGCACCTCGTCACCATGTGTAGATACACGAAGAGAATCTGGCGCCTCGTTGCTACATGGGCGGGATATCAGCAGTTGGAACCGGCCCAATGGGAGGAAGCCCGATCAGTCCATCAGTGGTGGGAGAGCCTAGCTAATACACCCGGCATTCCAAAGAAGGGCCTTCGGTCCCTTATCCTGCTAGTAGTTTGGGAAATTTGGAAGGAGCGAAACCGACGAATCTTTGATCACAAAGAGATGGCAACAGGTGTTCTCCTAGCAAAAATCAAAGAGGAGGCCAGCTTGTGGGCTTTAGCTGGGGCTAAAAGATTGCGCGAGCTCATCCCACACTCTGTATAG
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| CDS seq | ATGCCGTTGGTCTATGAGATCTCCAAAAATAGGAAGAAATCCCTACGGCAAGGGAAAGAAGACGACTCCTGGGTGCATGACCTGACCCTCGATGCGGGTTCATCTATCACAATCAACCTTCTCGATCAGCTAGTCCGCCTGTGGGAGGCGGTACAGAATGTGCACTTAGACAGCGAGGAGCCGGATCAGATTGTTTGGAAATTCACAAGCAGCGGCCACTATACAGCTTCCTCGGCTTATCATGCCCAATGTTTGGGGGCGCCAAACACAAACTTCAACTCCCTAATCTGGAAAGTTTGGGCGCCAGGGAAATGTAAATTTCATGCCTGGCTCATCATTCAAAATAGAGTCTGGACGTCGGACCGACTCGTGACAAGGGGTTGGCGGAATAACGGACATTGCCCCCTATGTCGTTGTGACACCGAGACAGCCTTGCACCTCGTCACCATGTGTAGATACACGAAGAGAATCTGGCGCCTCGTTGCTACATGGGCGGGATATCAGCAGTTGGAACCGGCCCAATGGGAGGAAGCCCGATCAGTCCATCAGTGGTGGGAGAGCCTAGCTAATACACCCGGCATTCCAAAGAAGGGCCTTCGGTCCCTTATCCTGCTAGTAGTTTGGGAAATTTGGAAGGAGCGAAACCGACGAATCTTTGATCACAAAGAGATGGCAACAGGTGTTCTCCTAGCAAAAATCAAAGAGGAGGCCAGCTTGTGGGCTTTAGCTGGGGCTAAAAGATTGCGCGAGCTCATCCCACACTCTGTATAG
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| Protein seq | MPLVYEISKNRKKSLRQGKEDDSWVHDLTLDAGSSITINLLDQLVRLWEAVQNVHLDSEEPDQIVWKFTSSGHYTASSAYHAQCLGAPNTNFNSLIWKVWAPGKCKFHAWLIIQNRVWTSDRLVTRGWRNNGHCPLCRCDTETALHLVTMCRYTKRIWRLVATWAGYQQLEPAQWEEARSVHQWWESLANTPGIPKKGLRSLILLVVWEIWKERNRRIFDHKEMATGVLLAKIKEEASLWALAGAKRLRELIPHSV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0341900 | OsMH63_10T0341900.1 | Chr10 | 22849145 | 22849915 | + | maker | ||
| CDS seq | ATGCCGTTGGTCTATGAGATCTCCAAAAATAGGAAGAAATCCCTACGGCAAGGGAAAGAAGACGACTCCTGGGTGCATGACCTGACCCTCGATGCGGGTTCATCTATCACAATCAACCTTCTCGATCAGCTAGTCCGCCTGTGGGAGGCGGTACAGAATGTGCACTTAGACAGCGAGGAGCCGGATCAGATTGTTTGGAAATTCACAAGCAGCGGCCACTATACAGCTTCCTCGGCTTATCATGCCCAATGTTTGGGGGCGCCAAACACAAACTTCAACTCCCTAATCTGGAAAGTTTGGGCGCCAGGGAAATGTAAATTTCATGCCTGGCTCATCATTCAAAATAGAGTCTGGACGTCGGACCGACTCGTGACAAGGGGTTGGCGGAATAACGGACATTGCCCCCTATGTCGTTGTGACACCGAGACAGCCTTGCACCTCGTCACCATGTGTAGATACACGAAGAGAATCTGGCGCCTCGTTGCTACATGGGCGGGATATCAGCAGTTGGAACCGGCCCAATGGGAGGAAGCCCGATCAGTCCATCAGTGGTGGGAGAGCCTAGCTAATACACCCGGCATTCCAAAGAAGGGCCTTCGGTCCCTTATCCTGCTAGTAGTTTGGGAAATTTGGAAGGAGCGAAACCGACGAATCTTTGATCACAAAGAGATGGCAACAGGTGTTCTCCTAGCAAAAATCAAAGAGGAGGCCAGCTTGTGGGCTTTAGCTGGGGCTAAAAGATTGCGCGAGCTCATCCCACACTCTGTATAG
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| Protein seq | MPLVYEISKNRKKSLRQGKEDDSWVHDLTLDAGSSITINLLDQLVRLWEAVQNVHLDSEEPDQIVWKFTSSGHYTASSAYHAQCLGAPNTNFNSLIWKVWAPGKCKFHAWLIIQNRVWTSDRLVTRGWRNNGHCPLCRCDTETALHLVTMCRYTKRIWRLVATWAGYQQLEPAQWEEARSVHQWWESLANTPGIPKKGLRSLILLVVWEIWKERNRRIFDHKEMATGVLLAKIKEEASLWALAGAKRLRELIPHSV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.087724 | 0.1066885 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0465300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g39070 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0465300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0009960 | SBH | 0.0 | 0.0 | 6.016103 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0010330 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0010070 | SBH | 0.0 | 0.0 | 9.168191 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0081800 | SBH | 0.0069295 | 0.039311 | 0.0176 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0010100 | SBH | 0.0 | 0.0 | 2.222610 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0366500 | RBH | 0.1729535 | 0.1210545 | 0.113918 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0009880 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0009850 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0009890 | SBH | 0.0 | 0.0 | 0.522067 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G010200 | SBH | 0.0 | 0.0 | 1.959094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
