Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0034000 | OGI:10007400 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:2371800-2377106 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGTGACTTTCTGGTGCTCCAAATATTTTTATTTTTTGGGATAGAGGATAAATGTGAGGACAATAGAGGTGTTATTGAAGATAAAATGGCAGCTGTCAGACGGATTCTGTACTAAATTGAAATCATAAACACATAAGTTCAATAATTGTACTCCCTCGGTCTAAATTGTAGCAACCCATGAAGCTCAATAATTTAAATCAAACCGAGACTTAACCAATTTAGGTAATGATCCAATGGAAATGCAATTACCCAAGGCTTCTTTTGACCAAACAATATTCAGAAACAATATTACAGCCTCACGTTCACCAATGTATCCAGTGATGTTGCGAGGGTAGGGAAGGTCATACTGCTGACGATGTGAAACTCATTCTGTTGGGACGGAATAAGCGTATCTTCCAAAAAAATCCCACAACGGTTGATAGGGTGGCCACCCTAATTCTTCAAGATATTGATCAAAGACTCTTGGCTTTCCAACCTCCTTGATGCTTTTTTTCGTTTTTGTGTTTTTGTTGTTTTCTTGTCTGTAAATAACTTTTATTTCGTCTAATATATTCCGGCAGTCCTTCTGCCGTCGTTCCCCTAAAAAAAAAAGAATCAGGGTCATACAAGACAGCCAGAAAAAAAGGGAAACAGAAAATTGTACCAGATAACTACATGAATACTAATACTACAGACTGCAGAGTGTAGACATGGTTTATTTCTTCAGAAGACACTTCATATAAGCAAGAAAAACCACAAGTAGAGCATCACCTACTGTGTACATTAAGGTCAGATTTTTGTAGAGCGTGAGATCTTCAAGCTGCTTGATCCAATTTACATTACCCAAGATAAGTGGAGATCATGTTTAGAAAGATAACTAATATATTATATTCTCAGTCACTTATGCACCAATCGTGTATCTGGAAGTCGTCCAGCCAGACGCACCAATCGTACTTCACCTGTAGAAAGCAGCAGCAACCAAATTTGACGTTTCAGCTACTAAAACCTATAAATTGAGAATGCACGAGTCAATCTCACAAACCTTCCAGGTAAATCTCCTATAATCAGGTCAGGACATCAATCATCCTGGTTGTACCAATATCCACCACATCCAGGAATAGCATATTTCCAAGACCATGGATCCCTCAATAATGGCCCTAAATGTATAACAGAGAGTCAGAATTCCTCGATGTTAATCTGTGATAAATAAGAGAGAGAGAATTCCTCTATATAAACAAACTTCAAACATGTAAATCAGGTGAGCACTTACTAAAAGAATTAATAGACTAGAGGGTAACCTGCAAATGGAAGTTTCAACTTTCAAGGTTATGAGAACAGGTGACTACAATCCGAAAGTGAAGATTATAATAAGTCGTGCATTTTCATATATATGGGCAAAAGGAAGAAACTAGTATCAAAACCACATGCATGCATGCCATATATGTAGAACTAAGACTGGAAAGCTTTAAAACAATAACAGAGTAGGTGTAGTAGTGATTAAAATTTGAGTTTCTCAACAGGCAAAAAGTACAGCAAGGTAGTACTACTATCAAGGGAAGGTTGATCGAAAGGGACCTTCTTCAGGATTTCTTGAATGAACATCTGATAACTCTCTGATCTCAAGACTATCAATCCGCTGCCCGAGGCGTTCATACAGAGGCTTCACATTTATAGCTGGGCAGTATTTAATCGTAATATCTTGAAGAAGTGGGTAACGACCATGGCACCCTGCTACTGATTGCAAGCGTCTGCATCCCTCAAGACGGAGGATTCGTAGTGACGGAAGATCTCCCAAACAATCCAATGACTCCAGTTTATTACAGTGATCAATAATTAAGAGCTTGAGTGCATCCAGCTGTCCTGAGACGGAACAAAGCTTCTCACAGCCAAATATTAGTAGCTTCTTGAGGGAATGCTTCAGCGCGTCTAGTTGAACAGAATGAAGGTTGTCACACTGACCAATTCCCAGCGACTTGACTGTCGGTGGTAGATGGTTAAGTGTTACCAATCTATGACACCTACCTATGGTTAGACTCTCTAAACATGGCAGAGAATTATTTCTTAGTGATGGAGATTGCTGATCTGGAACAATTGTGGAAGCAAGGTCATTGCAGTGTTCCGACCTGCGTTCCACCTGTATTACACTCTCTGACTCTGTCTTATCCTCTCTCCACATTAGCTGAAGATTTCTGCAATCATGAATAGAAATAGATGTGAGAGATGGTGGAAGTCTAAAGATCTCTTCCAAGCTTTTACATTGCCTTATTGATAGTGACGTTAGATACGGTAACAACTGATCGCTTGGAACTCGAGTTGACTCCCCACTCACATGTCTGTGGCCTATTAGGTTATTACATTTTTCAATGGCCAAATTCTTCAAGGAAACCAAGCATATGAACTCTTCCTCTGGCCAGTACACAAGCACATCACAAGATTCAATTTTCAAATCCACAAGTTGTCCAAACCATTTCCATATCCCAACTGTTGGACGGGATGGGCCTAAGGGGAAGAAGAAGGCGCAGCCACATAACTCCATTTCCGAAAGAGGTGCTTCATAATTCTGATCAAGCTCCAGTCCTGCATTTCCGTCACTGACAGACAGTGTTAGCTTTGATAATGAAGAAAATCTAGACCTCAGAATTAATAAGGATAGCTCTGCCTTTTCTTCAACTAGCTTCAATATCCGAAGCTTTGGTGCTTTTGGAAGGGATTTCAACATTGGACAGTTCATTATACTAGCACTCTCAAGCAGGGGAAATGTCACTTCTTCTCCTTCCGTCGCCGACCATCTCTCCAACCTCTCCAAACGATGTAACTGAAGTTCTCTTAGTGCTGGAAAAAAATTGGATGTTGTGTAGCTGCATAGGCTTGCAAGGTTGTCTAAACTTGTGAGACAAAGAACTTTTAGGACATTCAAATGACAGAATTGAGGAAATTCCTCGCACATTGAACAACCAACTAGATAGAGCTCGGCCAAGTTCTGCAGCACACTGAGATCTGTCATCCAAGTTGGAAAACCATTGCCTTTGTAAAATGCTATTCTTAACATCAGGAGCCCATCATGAGGTTTTAGAGCATCTAGTACCTTCTTTTGGCGATCTGGTTCATCAACAAGGTGGTCATTACTCCATTCAAGAGACAAGTGTGTGAGTTTCACTTTATTTTCAATATTGACTGTGCTTGCTTGTGCCTCTGATACATTTTCTAGACCACACAACTCTAATTCACCACAAAGGTTTAAATTCTGCAATTCTCTGACAGTACTGCAACCAGAGATAGCACCAACCACAAAATATGTTAGTGTCTGTAAAGAAGTTAGATGTCCAAGGTCTGGAGGCATGTACTCCAGGTTTTTGCATCCATTAGTATAGAGGTGCCGTAGGCTTGTCATGTACTTCATATCCTTTGGGAGCCGGCGAAGTCTAATGCAATGAGAAACATTCAATGTCTGTAGATGGTACAGTATGGATATGTCCTCTGGAAGTTCTTTGATGTCGCAGTTTTCTGAGAGATTAAGATACCTTAGGTGCTTTAACTTTATCGGTCTAATTGGAAGTTCTTTGATTTCATATAGCTGCAGTCCACGTAGAGAAATGCACTTCGATAAATGATGTATCGATCCATAAGTATTCCATGTTGGATACAATAATGTCCGGAGAGTTGTAGATTGTTTCCTCAGAAAATCATCGAAATGATCTCCAGTTCTATGCCTTGACACGAGCAAGTGGTAAGTCGAACGATTTGACAACAACTCTTTGCGATAGGACCTATCCGTAATAGTTACGCATTCTTTCCCCATAACATATAGAGCAATGTCATGCATAAGATCATGTATCTTGCATGTGGTGGTGTATCGGAGTTGCACCCTGTCTCCATTATTACTGCACACAAGAGGAGTTTGTTTGACATCTTGAAAGAATGACCTCCAAGCTAGTTCCTTGAAAATTTCTTCCCCTGATGTCGTTTCAAAATGATATTTCTCCTCTAGTGGAATGAAGTCATGTGCCATCCATAGTTGAATCAAATTCTCCACATTAATCTCATAATTTTTGGGGAATATGGCACAGAAAGCAAAACATTGCTTCATGTGCGATGGTAGGTCGGCATAGCTAAGCTTTAGTATAGGTAAAATTCCAGTCTTCTCGTTGCAAATGTCACTTTTGGCTATTATATTCTTCCATTCTAGGATGCTGGTCTTGGTACTCAACATAGAACCAAAGGCTTTTGCAGCTAAAGGAGAACCTTGACATCTGTCCACAAACTTCTGAACAATTTCAGATAGCTCATCACTGCCAGCCAAACTGAATGCTCTAGTCTGTATTATTTCCTTCGTATATTGTTCGCCAAGTTTCTCAAGATTATAGGCTTCAACTACACCAGTGATCATAATTCTAGCTACTTGTGAATCACGAGTAGTTGTTAGTATTGCACTACCCTTGCCACCCAGCTTAAGGCAGGTCTTCAATTTTTCCCACTTATCAGCTTCCCGGTTCCATACATCATCCAAGACAATTAGGTACCTCTTCCCACTTATTGCCTCCTGCAGATCCTGCAATGCCTTTTCATGATCCTTCTCTGTGCTATTGCAGATGCTATTTGCAATATTTCCAACATCAAAATCATCTGACACACAACACCACCTCCAGAGTTCGAAATGGTTCTTGATCTCAGGCTCATTGTAAATGAGCTGAACAAAGGTGGTTTTTCCCAGCCCAGCCATTCCAACAATTGGAAGGACCAACAGATCCCTATTGCTGCTAGCATGATTATGCAATATCTTCACAATCTTCTTTTTCTCCTCATCTCTGGATCTTCTTATAATATCCTTCTCAGAGTCAGCCATTATAGAATCTGTTTGACGCCATTGATTGGATGGTGGAGCTTGCTGCCGGTGTATGAACCCAAAGGAGTTCATCTCTGAGACAAGGACCTCAATGCTCCCCACAATCTTTTGTAGCTTCTTACCCATCTTATTACGAAACATGATAGGGTTATAAGAAGGAAAGAGGCTTACAACGTCCATGCCGAGCATGTTGAACTGCCCCTTCTTCCTTGCGTCGCGCCGGAGGGCTTCGTACTTGAATTCATCAAAGACATCATTTGCCTCATAGGCCACCTTCTTGAGTGCTCTGAGCCAAGCGCTTACTCCAGGTCGAAAAGCTCCCTTCTCCTCCGCATCTTCAATGACATCCAGGATGGCAGGCAGCTTGCGCTCCAGGATCTCGCGCTGCTGCTCCATGCCTTCCATAACCTTGTACTGGTCTAGAAGGTAGCTGGAAACCTTCTCCTTCACCATGGAAACTAGTGGTCCGATAACAACCTCAGCCAT
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| CDS seq | ATGGCTGAGGTTGTTATCGGACCACTAGTTTCCATGGTGAAGGAGAAGGTTTCCAGCTACCTTCTAGACCAGTACAAGGTTATGGAAGGCATGGAGCAGCAGCGCGAGATCCTGGAGCGCAAGCTGCCTGCCATCCTGGATGTCATTGAAGATGCGGAGGAGAAGGGAGCTTTTCGACCTGGAGTAAGCGCTTGGCTCAGAGCACTCAAGAAGGTGGCCTATGAGGCAAATGATGTCTTTGATGAATTCAAGTACGAAGCCCTCCGGCGCGACGCAAGGAAGAAGGGGCAGTTCAACATGCTCGGCATGGACGTTGTAAGCCTCTTTCCTTCTTATAACCCTATCATGTTTCGTAATAAGATGGGTAAGAAGCTACAAAAGATTGTGGGGAGCATTGAGGTCCTTGTCTCAGAGATGAACTCCTTTGGGTTCATACACCGGCAGCAAGCTCCACCATCCAATCAATGGCGTCAAACAGATTCTATAATGGCTGACTCTGAGAAGGATATTATAAGAAGATCCAGAGATGAGGAGAAAAAGAAGATTGTGAAGATATTGCATAATCATGCTAGCAGCAATAGGGATCTGTTGGTCCTTCCAATTGTTGGAATGGCTGGGCTGGGAAAAACCACCTTTGTTCAGCTCATTTACAATGAGCCTGAGATCAAGAACCATTTCGAACTCTGGAGGTGGTGTTGTGTGTCAGATGATTTTGATGTTGGAAATATTGCAAATAGCATCTGCAATAGCACAGAGAAGGATCATGAAAAGGCATTGCAGGATCTGCAGGAGGCAATAAGTGGGAAGAGGTACCTAATTGTCTTGGATGATGTATGGAACCGGGAAGCTGATAAGTGGGAAAAATTGAAGACCTGCCTTAAGCTGGGTGGCAAGGATGTCAAGGTTCTCCTTTAG
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| Protein seq | MAEVVIGPLVSMVKEKVSSYLLDQYKVMEGMEQQREILERKLPAILDVIEDAEEKGAFRPGVSAWLRALKKVAYEANDVFDEFKYEALRRDARKKGQFNMLGMDVVSLFPSYNPIMFRNKMGKKLQKIVGSIEVLVSEMNSFGFIHRQQAPPSNQWRQTDSIMADSEKDIIRRSRDEEKKKIVKILHNHASSNRDLLVLPIVGMAGLGKTTFVQLIYNEPEIKNHFELWRWCCVSDDFDVGNIANSICNSTEKDHEKALQDLQEAISGKRYLIVLDDVWNREADKWEKLKTCLKLGGKDVKVLL |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0034000 | OsMH63_10T0034000.1 | Chr10 | 2371800 | 2377106 | - | maker | ||
| CDS seq | ATGGCTGAGGTTGTTATCGGACCACTAGTTTCCATGGTGAAGGAGAAGGTTTCCAGCTACCTTCTAGACCAGTACAAGGTTATGGAAGGCATGGAGCAGCAGCGCGAGATCCTGGAGCGCAAGCTGCCTGCCATCCTGGATGTCATTGAAGATGCGGAGGAGAAGGGAGCTTTTCGACCTGGAGTAAGCGCTTGGCTCAGAGCACTCAAGAAGGTGGCCTATGAGGCAAATGATGTCTTTGATGAATTCAAGTACGAAGCCCTCCGGCGCGACGCAAGGAAGAAGGGGCAGTTCAACATGCTCGGCATGGACGTTGTAAGCCTCTTTCCTTCTTATAACCCTATCATGTTTCGTAATAAGATGGGTAAGAAGCTACAAAAGATTGTGGGGAGCATTGAGGTCCTTGTCTCAGAGATGAACTCCTTTGGGTTCATACACCGGCAGCAAGCTCCACCATCCAATCAATGGCGTCAAACAGATTCTATAATGGCTGACTCTGAGAAGGATATTATAAGAAGATCCAGAGATGAGGAGAAAAAGAAGATTGTGAAGATATTGCATAATCATGCTAGCAGCAATAGGGATCTGTTGGTCCTTCCAATTGTTGGAATGGCTGGGCTGGGAAAAACCACCTTTGTTCAGCTCATTTACAATGAGCCTGAGATCAAGAACCATTTCGAACTCTGGAGGTGGTGTTGTGTGTCAGATGATTTTGATGTTGGAAATATTGCAAATAGCATCTGCAATAGCACAGAGAAGGATCATGAAAAGGCATTGCAGGATCTGCAGGAGGCAATAAGTGGGAAGAGGTACCTAATTGTCTTGGATGATGTATGGAACCGGGAAGCTGATAAGTGGGAAAAATTGAAGACCTGCCTTAAGCTGGGTGGCAAGGATGTCAAGGTTCTCCTTTAG
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| Protein seq | MAEVVIGPLVSMVKEKVSSYLLDQYKVMEGMEQQREILERKLPAILDVIEDAEEKGAFRPGVSAWLRALKKVAYEANDVFDEFKYEALRRDARKKGQFNMLGMDVVSLFPSYNPIMFRNKMGKKLQKIVGSIEVLVSEMNSFGFIHRQQAPPSNQWRQTDSIMADSEKDIIRRSRDEEKKKIVKILHNHASSNRDLLVLPIVGMAGLGKTTFVQLIYNEPEIKNHFELWRWCCVSDDFDVGNIANSICNSTEKDHEKALQDLQEAISGKRYLIVLDDVWNREADKWEKLKTCLKLGGKDVKVLL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.373701 | 0.8299305 | 0.289687 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0131100 | RBH | 0.746904 | 0.261682 | 0.005167 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g04120 | RBH | 0.479771 | 0.169573 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0131100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0001570 | RBH | 0.075387 | 0.0 | 0.318893 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0001550 | RBH | 0.0 | 0.284498 | 0.421732 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0001570 | RBH | 0.333504 | 1.720591 | 0.897250 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0001480 | RBH | 0.018804 | 0.084415 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001470 | RBH | 0.397988 | 3.623819 | 0.918227 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0033400 | SBH | 0.097713 | 2.177069 | 0.131548 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0001640 | RBH | 0.025597 | 0.084726 | 0.032389 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0038800 | RBH | 0 | 0.383571 | 0.399036 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0001510 | RBH | 0.020393 | 0.016073 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001570 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0001620 | RBH | 0.0 | 3.329804 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0001500 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0001520 | RBH | 0.062469 | 0.366843 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G001570 | RBH | 0.0 | 0.0 | 0.093874 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0001440 | RBH | 0.125727 | 3.130410 | 0.622261 |
