Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0025000 | OGI:10005460 | 9/16 | Minghui 63 | MH63RS3 | HZAU | Chr10:1774743-1777629 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGGACGTCCAGGCATCCGGAAGCATGGCGTACAAGATGGGGTACCTTTAAATCGGAGACTGACTGAGTGAAGGTTGGTTGGTTCACACTTCACACACATCTTTTTCGACCAACTGAAGTACTACTAGTTAATAATCTGCCTTTTTAAGGGAGACCGGCACGCAGGCCCGGCAATACCTACGTACTGCCATGGATGGCACATCTGCCAAGGTTGTGCTCTTCATCGGCGCCAGCTTTAGCTTCTTCCTCATCACGCATGCTCAGCAACAAGCTACTCGTTGCAGACCACAAGAGAGAGACGCCCTCCTGTCCTTCAAGCAAGGCATCACCAACGACAGTGTGGGCCTCCTCTCCTCATGGCGGAGAGGCCATGGCGATTGCTGCTCATGGGCAGGCATCACCTGTAGCAGCAAGACTGGCCATGTCGTCAAGCTCGATGTCAACAGCTTCCTTACTGATGATTCACCTATGGTTGGCCAGATAAGTCCATCTTTGCTGTCTCTCAACTACTTGCAGTACCTCGACCTCAGCTCAAACTTGCTGGCAGGGCCTAACGGCAGTGTCCCAGAGTTCCTAGGTTCAATGAACAGCTTGATACATCTTGACCTCTCCTACATCCCCTTCTCCGGTACACTGCCACCCCTGCTTAGCAACCTTACCAACTTGGAATATCTCGACCTCTCCTTCACATCATTTTCTGGTACACTTCCTCCTCAGCTGGGCAACCTTTCAAATTTACGGTATCTTGATGTTAGTGAGATGCAGAATGTAGTGTATTCGACTGACCTCTCATGGTTAAGTCGTCTGCATTTGTTAGAGTATATTGACATGAGCAATACTATTCTCAGCAAAATAACGAATTTGCCTGCCGTGCTCAACAAGATCCCAACTCTAAAGCATGTCCTCCTTTTGAATTGTTCAATTCCAAGTGCAAACCAATCCATCACACACCTAAACCTTACCCAGCTTGAGGAGCTTGATCTCTCTCTCAACTACTTTGGCCATCCAATTTCATCATGCTGGTTTTGGAAAGTAACAAGCATCAAGTCGCTCCGCCTAGATGAAACCTATCTCCATGGTCCCTTCCCTGACGAGCTAGGCGAAATGGTGTCGCTCCAACACCTAGATTTTTGTTTCAATGGAAATGCAGCCACAATGACTGTGGACTTAAACAACTTATGTGACCTGGAAAGCATATACCTTGACAAGAGTCTCTCATCCGGGAACATAACAGATTTGATGGATAAGTTACAGTGTTCCAGCAAATTGTATAGCTTGAGTTCTATAAGCAATAATATGATAGGAATGCTTCCAAGTAGTATAGAGCACTTCACCAGCTTAAATCACATTGATCTTACTAACAACAGTGTCAGTGGAGTCATGCCACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCAGAAAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTCATGGAACATGTTCTATGGTTCGTTACCAAGGTGGATTGGAGACTTGGTGACCTTGCGTATTCTGCACCTGGGTCATAACATGTTCAATGGAGATATTCCAGTCAACATCACACATCTTACACAACTTCAATACCTGAATTTAGCAGACAATAATATATCAGGTTTAATTCCTCTATCTTTGTCACATTTTAATGAAATGACTCTAAAAGCTGTGGGTGATTCAATCTCGACCCTGGCATTTGATGAGTCATTTGATACATTTTCCCTCGGAATGAAGCATCAAATACTCAAGTATGGATCACATGGGGTCGTTGATATGGTTGGAATCGACTTATCGCTCAATCGCATAACCGGTGGAATTCCAGAGGAAATAACATCTCTCGATAGATTGTCTAATTTAAATTTATCATGGAATCGCTTGAGTGGGAAAATTCCTGAGAACATTGGGTCTATGAAATCAATAGAATCACTCGACCTCTCAAGGAACTACCTTTGTGGTGAAGTCCCATCAAGCTTGACAGATCTTACATATTTAAGCTACCTGGACCTATCGTACAACAATCTTACTGGAAAAGTTCCATCCGGACGCCAACTTGACACCTTGTACTTAGAGAATCCATCCATGTACAATGGAAACATTGGTCTTTGTGGCCCTCCTCTTCAAAGGAATTGTTCAAGCAATGGTTATGCACAAGGGCATGGTGATCACAAAGGACAAGAGAAGGATTCCAATTCAATGTTCTTTTACTATGGTCTTGCATCAGGTTTTGTTGTTGGTTATTGGGTTGTGTTTTGTGCTCTGCTATTCCACAAGTCATGGAGAGTCACTTATTTCTGCCTTGTGGACAAGGTATATGACAAGTTATATGTGTATGTGGTCATTACTTGGACCAGATGGATGAACACTACAAATTAATTAAGCACAGTAAGGAAATGTGTTACTAGCATTAAGCAGGTTCTACTTCCGTTTATAGTCATTTTCTGTTTTTGGTGGCTTTGTAATAATGGATGAATTTACACTTGTGGGACATTTTGAATCCCATACGTGATTCAATTTCCATTAGATTTTTTTTAGTTGTGACTAGAATTTCTATGTGTTATAATGATCCTGCT
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| CDS seq | ATGGATGGCACATCTGCCAAGGTTGTGCTCTTCATCGGCGCCAGCTTTAGCTTCTTCCTCATCACGCATGCTCAGCAACAAGCTACTCGTTGCAGACCACAAGAGAGAGACGCCCTCCTGTCCTTCAAGCAAGGCATCACCAACGACAGTGTGGGCCTCCTCTCCTCATGGCGGAGAGGCCATGGCGATTGCTGCTCATGGGCAGGCATCACCTGTAGCAGCAAGACTGGCCATGTCGTCAAGCTCGATGTCAACAGCTTCCTTACTGATGATTCACCTATGGTTGGCCAGATAAGTCCATCTTTGCTGTCTCTCAACTACTTGCAGTACCTCGACCTCAGCTCAAACTTGCTGGCAGGGCCTAACGGCAGTGTCCCAGAGTTCCTAGGTTCAATGAACAGCTTGATACATCTTGACCTCTCCTACATCCCCTTCTCCGGTACACTGCCACCCCTGCTTAGCAACCTTACCAACTTGGAATATCTCGACCTCTCCTTCACATCATTTTCTGGTACACTTCCTCCTCAGCTGGGCAACCTTTCAAATTTACGGTATCTTGATGTTAGTGAGATGCAGAATGTAGTGTATTCGACTGACCTCTCATGGTTAAGTCGTCTGCATTTGTTAGAGTATATTGACATGAGCAATACTATTCTCAGCAAAATAACGAATTTGCCTGCCGTGCTCAACAAGATCCCAACTCTAAAGCATGTCCTCCTTTTGAATTGTTCAATTCCAAGTGCAAACCAATCCATCACACACCTAAACCTTACCCAGCTTGAGGAGCTTGATCTCTCTCTCAACTACTTTGGCCATCCAATTTCATCATGCTGGTTTTGGAAAGTAACAAGCATCAAGTCGCTCCGCCTAGATGAAACCTATCTCCATGGTCCCTTCCCTGACGAGCTAGGCGAAATGGTGTCGCTCCAACACCTAGATTTTTGTTTCAATGGAAATGCAGCCACAATGACTGTGGACTTAAACAACTTATGTGACCTGGAAAGCATATACCTTGACAAGAGTCTCTCATCCGGGAACATAACAGATTTGATGGATAAGTTACAGTGTTCCAGCAAATTGTATAGCTTGAGTTCTATAAGCAATAATATGATAGGAATGCTTCCAAGTAGTATAGAGCACTTCACCAGCTTAAATCACATTGATCTTACTAACAACAGTGTCAGTGGAGTCATGCCACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCAGAAAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTCATGGAACATGTTCTATGGTTCGTTACCAAGGTGGATTGGAGACTTGGTGACCTTGCGTATTCTGCACCTGGGTCATAACATGTTCAATGGAGATATTCCAGTCAACATCACACATCTTACACAACTTCAATACCTGAATTTAGCAGACAATAATATATCAGGTTTAATTCCTCTATCTTTGTCACATTTTAATGAAATGACTCTAAAAGCTGTGGGTGATTCAATCTCGACCCTGGCATTTGATGAGTCATTTGATACATTTTCCCTCGGAATGAAGCATCAAATACTCAAGTATGGATCACATGGGGTCGTTGATATGGTTGGAATCGACTTATCGCTCAATCGCATAACCGGTGGAATTCCAGAGGAAATAACATCTCTCGATAGATTGTCTAATTTAAATTTATCATGGAATCGCTTGAGTGGGAAAATTCCTGAGAACATTGGGTCTATGAAATCAATAGAATCACTCGACCTCTCAAGGAACTACCTTTGTGGTGAAGTCCCATCAAGCTTGACAGATCTTACATATTTAAGCTACCTGGACCTATCGTACAACAATCTTACTGGAAAAGTTCCATCCGGACGCCAACTTGACACCTTGTACTTAGAGAATCCATCCATGTACAATGGAAACATTGGTCTTTGTGGCCCTCCTCTTCAAAGGAATTGTTCAAGCAATGGTTATGCACAAGGGCATGGTGATCACAAAGGACAAGAGAAGGATTCCAATTCAATGTTCTTTTACTATGGTCTTGCATCAGGTTTTGTTGTTGGTTATTGGGTTGTGTTTTGTGCTCTGCTATTCCACAAGTCATGGAGAGTCACTTATTTCTGCCTTGTGGACAAGGTATATGACAAGTTATATGTGTATGTGGTCATTACTTGGACCAGATGGATGAACACTACAAATTAA
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| Protein seq | MDGTSAKVVLFIGASFSFFLITHAQQQATRCRPQERDALLSFKQGITNDSVGLLSSWRRGHGDCCSWAGITCSSKTGHVVKLDVNSFLTDDSPMVGQISPSLLSLNYLQYLDLSSNLLAGPNGSVPEFLGSMNSLIHLDLSYIPFSGTLPPLLSNLTNLEYLDLSFTSFSGTLPPQLGNLSNLRYLDVSEMQNVVYSTDLSWLSRLHLLEYIDMSNTILSKITNLPAVLNKIPTLKHVLLLNCSIPSANQSITHLNLTQLEELDLSLNYFGHPISSCWFWKVTSIKSLRLDETYLHGPFPDELGEMVSLQHLDFCFNGNAATMTVDLNNLCDLESIYLDKSLSSGNITDLMDKLQCSSKLYSLSSISNNMIGMLPSSIEHFTSLNHIDLTNNSVSGVMPRGFQNMANLEYLHLSSNRLSGQMPLLPTSLKILHAQMNFLSGHLPLEFRAPNLENLIISSNYITGQVPGSICESENMKHLDLSNNLFEGEVPHCRRMRNLRFLLLSNNSFSGKFPQWIQSFSSLVFLDLSWNMFYGSLPRWIGDLVTLRILHLGHNMFNGDIPVNITHLTQLQYLNLADNNISGLIPLSLSHFNEMTLKAVGDSISTLAFDESFDTFSLGMKHQILKYGSHGVVDMVGIDLSLNRITGGIPEEITSLDRLSNLNLSWNRLSGKIPENIGSMKSIESLDLSRNYLCGEVPSSLTDLTYLSYLDLSYNNLTGKVPSGRQLDTLYLENPSMYNGNIGLCGPPLQRNCSSNGYAQGHGDHKGQEKDSNSMFFYYGLASGFVVGYWVVFCALLFHKSWRVTYFCLVDKVYDKLYVYVVITWTRWMNTTN |
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| Function | LRR receptor-like serine/threonine-protein kinase FLS2 [UniProtKB/Swiss-Prot:Q0JA29] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0025000 | OsMH63_10T0025000.1 | Chr10 | 1774743 | 1777629 | + | maker | ||
| CDS seq | ATGGATGGCACATCTGCCAAGGTTGTGCTCTTCATCGGCGCCAGCTTTAGCTTCTTCCTCATCACGCATGCTCAGCAACAAGCTACTCGTTGCAGACCACAAGAGAGAGACGCCCTCCTGTCCTTCAAGCAAGGCATCACCAACGACAGTGTGGGCCTCCTCTCCTCATGGCGGAGAGGCCATGGCGATTGCTGCTCATGGGCAGGCATCACCTGTAGCAGCAAGACTGGCCATGTCGTCAAGCTCGATGTCAACAGCTTCCTTACTGATGATTCACCTATGGTTGGCCAGATAAGTCCATCTTTGCTGTCTCTCAACTACTTGCAGTACCTCGACCTCAGCTCAAACTTGCTGGCAGGGCCTAACGGCAGTGTCCCAGAGTTCCTAGGTTCAATGAACAGCTTGATACATCTTGACCTCTCCTACATCCCCTTCTCCGGTACACTGCCACCCCTGCTTAGCAACCTTACCAACTTGGAATATCTCGACCTCTCCTTCACATCATTTTCTGGTACACTTCCTCCTCAGCTGGGCAACCTTTCAAATTTACGGTATCTTGATGTTAGTGAGATGCAGAATGTAGTGTATTCGACTGACCTCTCATGGTTAAGTCGTCTGCATTTGTTAGAGTATATTGACATGAGCAATACTATTCTCAGCAAAATAACGAATTTGCCTGCCGTGCTCAACAAGATCCCAACTCTAAAGCATGTCCTCCTTTTGAATTGTTCAATTCCAAGTGCAAACCAATCCATCACACACCTAAACCTTACCCAGCTTGAGGAGCTTGATCTCTCTCTCAACTACTTTGGCCATCCAATTTCATCATGCTGGTTTTGGAAAGTAACAAGCATCAAGTCGCTCCGCCTAGATGAAACCTATCTCCATGGTCCCTTCCCTGACGAGCTAGGCGAAATGGTGTCGCTCCAACACCTAGATTTTTGTTTCAATGGAAATGCAGCCACAATGACTGTGGACTTAAACAACTTATGTGACCTGGAAAGCATATACCTTGACAAGAGTCTCTCATCCGGGAACATAACAGATTTGATGGATAAGTTACAGTGTTCCAGCAAATTGTATAGCTTGAGTTCTATAAGCAATAATATGATAGGAATGCTTCCAAGTAGTATAGAGCACTTCACCAGCTTAAATCACATTGATCTTACTAACAACAGTGTCAGTGGAGTCATGCCACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCAGAAAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTCATGGAACATGTTCTATGGTTCGTTACCAAGGTGGATTGGAGACTTGGTGACCTTGCGTATTCTGCACCTGGGTCATAACATGTTCAATGGAGATATTCCAGTCAACATCACACATCTTACACAACTTCAATACCTGAATTTAGCAGACAATAATATATCAGGTTTAATTCCTCTATCTTTGTCACATTTTAATGAAATGACTCTAAAAGCTGTGGGTGATTCAATCTCGACCCTGGCATTTGATGAGTCATTTGATACATTTTCCCTCGGAATGAAGCATCAAATACTCAAGTATGGATCACATGGGGTCGTTGATATGGTTGGAATCGACTTATCGCTCAATCGCATAACCGGTGGAATTCCAGAGGAAATAACATCTCTCGATAGATTGTCTAATTTAAATTTATCATGGAATCGCTTGAGTGGGAAAATTCCTGAGAACATTGGGTCTATGAAATCAATAGAATCACTCGACCTCTCAAGGAACTACCTTTGTGGTGAAGTCCCATCAAGCTTGACAGATCTTACATATTTAAGCTACCTGGACCTATCGTACAACAATCTTACTGGAAAAGTTCCATCCGGACGCCAACTTGACACCTTGTACTTAGAGAATCCATCCATGTACAATGGAAACATTGGTCTTTGTGGCCCTCCTCTTCAAAGGAATTGTTCAAGCAATGGTTATGCACAAGGGCATGGTGATCACAAAGGACAAGAGAAGGATTCCAATTCAATGTTCTTTTACTATGGTCTTGCATCAGGTTTTGTTGTTGGTTATTGGGTTGTGTTTTGTGCTCTGCTATTCCACAAGTCATGGAGAGTCACTTATTTCTGCCTTGTGGACAAGGTATATGACAAGTTATATGTGTATGTGGTCATTACTTGGACCAGATGGATGAACACTACAAATTAA
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| Protein seq | MDGTSAKVVLFIGASFSFFLITHAQQQATRCRPQERDALLSFKQGITNDSVGLLSSWRRGHGDCCSWAGITCSSKTGHVVKLDVNSFLTDDSPMVGQISPSLLSLNYLQYLDLSSNLLAGPNGSVPEFLGSMNSLIHLDLSYIPFSGTLPPLLSNLTNLEYLDLSFTSFSGTLPPQLGNLSNLRYLDVSEMQNVVYSTDLSWLSRLHLLEYIDMSNTILSKITNLPAVLNKIPTLKHVLLLNCSIPSANQSITHLNLTQLEELDLSLNYFGHPISSCWFWKVTSIKSLRLDETYLHGPFPDELGEMVSLQHLDFCFNGNAATMTVDLNNLCDLESIYLDKSLSSGNITDLMDKLQCSSKLYSLSSISNNMIGMLPSSIEHFTSLNHIDLTNNSVSGVMPRGFQNMANLEYLHLSSNRLSGQMPLLPTSLKILHAQMNFLSGHLPLEFRAPNLENLIISSNYITGQVPGSICESENMKHLDLSNNLFEGEVPHCRRMRNLRFLLLSNNSFSGKFPQWIQSFSSLVFLDLSWNMFYGSLPRWIGDLVTLRILHLGHNMFNGDIPVNITHLTQLQYLNLADNNISGLIPLSLSHFNEMTLKAVGDSISTLAFDESFDTFSLGMKHQILKYGSHGVVDMVGIDLSLNRITGGIPEEITSLDRLSNLNLSWNRLSGKIPENIGSMKSIESLDLSRNYLCGEVPSSLTDLTYLSYLDLSYNNLTGKVPSGRQLDTLYLENPSMYNGNIGLCGPPLQRNCSSNGYAQGHGDHKGQEKDSNSMFFYYGLASGFVVGYWVVFCALLFHKSWRVTYFCLVDKVYDKLYVYVVITWTRWMNTTN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.177642 | 0.119935 | 0.0332575 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0120300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g03100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0120300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000690 | SBH | 0.0 | 7.051491 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0001020 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0000680 | SBH | 0.0 | 13.021489 | 0.280552 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001040 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0001060 | SBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000950 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001020 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0001030 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0000940 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000980 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000990 | RBH | 0.103630 | 0.0 | 0.521717 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000880 | RBH | 0.225343 | 3.177912 | 0.224813 |
