Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_09G0033000 | OGI:09006570 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr09:2544821-2549581 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCGCTTGCGGATTTTATCTGTGATCGTAAGAATTACCAACAGAGGTCGTGGTAGGGGCTGTGCTGGAGGCCGTGGAAGAGGTCGTGGTAGAGGTCGCCATAATGAGGCAGCATCCTCGAACCAGATGGAGGATGAGCACATGGAAGAGGAAGAGGGTGATAGCCACTCAGCTGCTGTCTCTGATGATGCTCCTCGAGCTGCTCCGGGGATGACACTCACTAGATGGACATCCATGCGCTTAGACACATTTGATGTGTCTGGTACTCCCGTTAATGCTGCAGACTGGTTACACAAGATGGAGAAGTATATGAGGGGATCTAGAATGACTCCTGAGGAGAAGGTTACTTTCATGCCTTTTCAGTTGACTGGTCAGGCGGACATTTGGTGGGATGGAGTTGTTGAAGCATGGAACCCTGACCATGGTGCTATTACTTGGGAAGTTTTTCTTCAGCAGTTCAGAGCTAAGTATTATCCAGAATCATTTAGGGACAAGATGAGTAATGAGTTAAACAATATCCAACAGGGAAGCAAGACTGTTGATGAGTATGAACGGGAGTTCAACAGTATTGTATGCTTTGTGCCTAGCGTGGCAAGTGATGAGCGTGAGAAGGCTAGAAAGTTTTCTCGAGGGCTCATTGCCCGATATAGAGAAGTGATGGGAAGAAACCCACCTACTATATACCTCAATGCAGTTGAGGAGGCTCGAGGGATGGAGGTTGAGCTCCAAATTACTACTGCACAGAAGAATCGTTCTGGCAATGTCACTGGTAATGAGCAGAAGAGAGCCCATTAGGGAGGGGGTGAGAACTCGCAGCGACCACCTTTCAAGAAGTACAAACAAAATCAGGTCACTCAACCATCATCCAAACCTAGGCAGTGGGGTTCTCAGCCTAATGTAGCTTCACGTCCTACGAAGTCTCAGTTGATTCACCCTGTACCAGGGAAAGGGCTATTTTGCTTTAAGTGTGGAAAGAATCACCATTCAGCAGAGTGTGGGTTTACTGAGGCATGTCGTGGGTGTGGCAAGGCTGGACACATGGAGTTGGTATGTAAGCGTAACCCAAATTCTATCATCAAGTGGCAAAAGCCGAGCTCCTATTCAGCAACCTCTTCGACAGCTAGCTATCCTCGAGGTTCAGGTTCTTCCACTAGTACACCCCGCGGTGCCGTTCAGATGATGACAGCTTATCCACTTCCTTACCAGCAGTTCACACATAATTACCCACCACCACCATTACCAGGACAGTATTGGTCCATGCCTCAATCTCTTGCTCCACGTGCTCCACTCCAGTTGCCTGCATCGCCTATGGCGCAACCTTCTGCTTCAGCTCCACCTCACCAGCAAGCCTCAGGCTCTACTACCCCAGCTATGGCAAGAGTCTACAACATGCCTGCAACTTCATCCCTTGGTCGCCCGGATGTCGTTGCAGGTACACTTTCAGTTGATTTGCATGATGCTCTAGTTCTATTTGATTCTGTTGCTACATTTTCCTTTGTTTCAATTGAGTTTGCGAAAAGAGCTAATCTATTTAGTCAAGAGGTCTCTCGATCTGTCCAAGTCAGCTCTCCAGGGGGTATAATCTCTAGTTCAGTAGTATGTCCAGGTTGAGCAATCTCTATTGATGGGGAGGAATTTGTGGCAAATCTAATTGTGATTCCCTTACCGCTCTTTGATGTGATCTTGGGCATGGATTGGTTGAACCGATATAGTACTATAATCTCTTGTTTCTAGAAGACTATTACCTTGGAATCTCCATCAGGCGAGGAGATGGTTTTCCAAGGGAGCACGCCTCCGCATTCTATTTTCGTGATGGCAAGGTTATTTCCTGGGCAACGTGCTGTAAAGACAGGGTTATTATGGGCCTTAGCCGAGAAGGCATCCAAGCCTTTATTGATTGAAGATGTTCCTGTAGTGCAAGATTATCCTGATGTTTTTCCTGCAGAATTGTCAGGGATGCCACCTGAGCATGATGTAGAGTTTCGTATTGATCTTGTTCCTGGTACACGACCTATCTCAGAGCCCCGTACCGGTTAGCTCGTCCTTTCCAAGAAGAGTTGAAGAAACAATTAGATGATCTATTATCCAAGAAGTTAATCCGACGGAGTGTGTCACCATGGGGTGCACCTGTTATTTTTACTGAGAAGAATGATGGAAGTTGGCGTATGTGTGTGGACTATCGGGCCTTAAATGCTACGACAATCAAGAACAAGCACCCATTGCCTCGTATTGAAGATTTGTTTGATCAGTTAAAGGGAGTGAAGGTGTTTTCTAAAATTGATTTGCAATCTGGTTATAACCAAATTCGAGTGCGAGAAGAGGATATTGAGAAGACCGCATTTTCCACGAGGTATGGGCATTATGAGTATAGAGTAATGTCTTTTGGGCTGACCAATGCTCCGGCCTATTTTATGGAGGCGATGAATAGCATGTTGCATAGCTTTCTAGATAATTTTGTGGTGGTGTTTATTGATGATATTCTAATTTACTCCAAAGATGTAGAGGAGCATGAGCGTCATCTGAGGATGGTACTAGGGACCCTAAGAGAAAACAAGTTCTATGCTAAACTGAAGAAGTGTGAGTTCTGGCTTCCTGAAGTGGCTTTCCTAGGGCATGTAATTAATCAGCAAGGTATCTCAGTTGATCCAAGCAAAGTTTCAAGTGTTGTCGGATGGGAAAGACCAACTAATGTGAAGGATGTGAGGAGTTTTTTTGGGTATGGCGGGGTACTACCGACGCTTCGTAAAGGATTTCTCGATTATCGCTAAACCAATGACGATGCTCACACATAAGGATGTGAAGTTTCAATGGACGGACCAATGTGAGCATAGTTTCCAGCAATTAAAGCAGAGGTTAGTAACTGCTCCGGTGCTTACTTTGCCCCAACCTGGTAAACGTTTCACTGTCTATTCCGATGCTTCACGAGTAGGCCTTGGTTGTGTTCTTATGCAAGAGGGCAATGTTATAGCTTATGCGTCTAGGCAGTTAAAGAAGCATGAGCAGAATTACCCCACTCATGATCTTGAGCTTGCAGCAGTGGTCTTTGCTCTCAAAATTTGGAGGCACTACCTGTATGGAGAATCTTGTGATATTTTCACTGATCATAAGAGTCTGAAATACATCTTCACTCAGAAGGATTTGAACTTAAGACAGAGGAGGTGGCTGGAGTTGATTAAAGATTACGACCTCAACATTCAATATACACCGGGTAAGGCGAATGTGGTTGCAGATGCTTTAAGCCATAAGGTCATTCCTCCAACCGTGAGTTGTTTCATAACTGATTTTGAACGGATGGATATCTCCTATTGTTATGCCGGAGTGGCGAGTACCGAGTCACGAGTCATTCTTGAGTCCGCCATACCCCAACGAGTGCTAGAGGCCCAACAACACGATCAGTTGCTACAACAAGTTAAGAAACGCGTAAAGGAAGGAAAAATTGGAGATTTCACTTTGGATTCCTTGGGAGTTGTGCGATTCCATGGGCGTTTATGTGTTCAACAGAAAGCTGAAGTCAAGAAAGAGATTTTGCGAGAAGCACACCGAACACCATATACTGTGCATCCTGGGGAGAACAAGAAGTATCATGATCTGAAGAAGATCTATTTGTGGAAGAGGATGAAAGTGGATGTGGCCAAGTACGTGGCATCATGTGGGGAATGTCAGCAAGTAAAGGCTGAACATAAGAGTCCTATTGGAAAGTTACAATCATTGGAAGTTCCTGTATGGCCTTGGGATGATATTGCTATGGATTTCGTGGTTGGGCTTCCTCGAACTCCACAAGGAAAGGACGTCATCTGGGTGGTTGTAGATCGTCTGAGTAAGGTGGCACATTTCATTCTTATCCGCATCACTTATTCTGCGAGTGACTTGGCACCGATCTATACATGCGAGGTAGTGAGGTTACATGGTGTGCCCCGCTCGATTGTTTCTGATAGGGATGCTAAGTTTTCTTCTAAGTTCTGGGATTCTGTGCAAGAGGCATTTGATACTCAATTGAAATTCAGTACGGCTTTTCACCCTCAGACTGATGGTCAATCTGAGCAGACTATTCAAACTTTAGAGGATATGTTGAGATCATGTATCCTTTCATGGAAAGGCAGTTGGGAGGATCATTTGCCACTTGTAGAATTTGCTTATAACAATAGTTTCCATGCTAGCATTCGAATGGCACCATATGAGGCACTTTATGGAAGAAAGTGTCGATCCCCATTGTGTTGGGATTCCATAGGGGAGAGAGCTATGTTAGGACCCGATTGGGTTCAACAGACCACAGAACGGATAGCAGAAATACGACAACACATGCTTGCAGCTCAAAGTAGGCAGAAGAGCTACGCCGATGTCAGACGACCGGAATTAGAGTTTGAAGTGGGCGATCAAGTACTTCTAAAGGTATCTCCTTCCAAAGATGTTGTGAGATTTGGAACGAAAGGCAAACTCAGCCCCAGGTATATTGGTCCATTCTTGATAGTGGAAAGAGTTGGAATCCTAGCGTATCGCCTTGAGTTACCAGAGTCCATGAAAGGTGTACATGATGTATTCCATATTTCCGTGTTGAGAAAATATTTGAGAGACCCTGAACATCATATCACCATAGAGCCGGTGACCATTGAGCAAAATTTGACATTTGAGTCTCGCCCTGTAAGAATATTGGTGGAATCTGAGAGGGTGCTCAGGCATATAACTATCAAGTATGTCAAGGTTCTTTGGACGCACCAGACCGAGCGAGAAGCCACATGGGAACTTGAGTCACAGATGCGGTGA
More
|
||||||||||
| CDS seq | ATGCGCTTGCGGATTTTATCTGTGATCGTAAGAATTACCAACAGAGGTCGTGGTAGGGGCTGTGCTGGAGGCCGTGGAAGAGGTCGTGGTAGAGGTCGCCATAATGAGGCAGCATCCTCGAACCAGATGGAGGATGAGCACATGGAAGAGGAAGAGGGTGATAGCCACTCAGCTGCTGTCTCTGATGATGCTCCTCGAGCTGCTCCGGGGATGACACTCACTAGATGGACATCCATGCGCTTAGACACATTTGATGTGTCTGGTACTCCCGTTAATGCTGCAGACTGGTTACACAAGATGGAGAAGTATATGAGGGGATCTAGAATGACTCCTGAGGAGAAGGTTACTTTCATGCCTTTTCAGTTGACTGGTCAGGCGGACATTTGGTGGGATGGAGTTGTTGAAGCATGGAACCCTGACCATGGTGCTATTACTTGGGAAGTTTTTCTTCAGCAGTTCAGAGCTAAGTATTATCCAGAATCATTTAGGGACAAGATGAGTAATGAGTTAAACAATATCCAACAGGGAAGCAAGACTGTTGATGAGTATGAACGGGAGTTCAACAGTATTGTATGCTTTGTGCCTAGCGTGGCAAGTGATGAGCGTGAGAAGGCTAGAAAGTTTTCTCGAGGGCTCATTGCCCGATATAGAGAAGTGATGGGAAGAAACCCACCTACTATATACCTCAATGCAGTTGAGGAGGCTCGAGGGATGGAGGTTGAGCTCCAAATTACTACTGCACAGAAGAATCGTTCTGGCAATGTCACTGGGAAAGGGCTATTTTGCTTTAAGTGTGGAAAGAATCACCATTCAGCAGAGTGTGGGTTTACTGAGGCATGTCGTGGGTGTGGCAAGGCTGGACACATGGAGTTGGTATGTAAGCGTAACCCAAATTCTATCATCAAGTGGCAAAAGCCGAGCTCCTATTCAGCAACCTCTTCGACAGCTAGCTATCCTCGAGGTTCAGGTTCTTCCACTAGTACACCCCGCGGTGCCGTTCAGATGATGACAGCTTATCCACTTCCTTACCAGCAGTTCACACATAATTACCCACCACCACCATTACCAGGACAGTATTGGTCCATGCCTCAATCTCTTGCTCCACGTGCTCCACTCCAGTTGCCTGCATCGCCTATGGCGCAACCTTCTGCTTCAGCTCCACCTCACCAGCAAGCCTCAGGCTCTACTACCCCAGCTATGGCAAGAGTCTACAACATGCCTGCAACTTCATCCCTTGGTCGCCCGGATGTCGTTGCAGGTACACTTTCAGTTGATTTGCATGATGCTCTAGTTCTATTTGATTCTGTTGCTACATTTTCCTTTGTTTCAATTGAGTTTGCGAAAAGAGCTAATCTATTTAGTCAAGAGGTCTCTCGATCTGTCCAAGTCAGCTCTCCAGGGGGTATAATCTCTAGTTCAGTAAAGACTATTACCTTGGAATCTCCATCAGGCGAGGAGATGGTTTTCCAAGGGAGCACGCCTCCGCATTCTATTTTCGTGATGGCAAGGTTATTTCCTGGGCAACGTGCTGTAAAGACAGGGTTATTATGGGCCTTAGCCGAGAAGGCATCCAAGCCTTTATTGATTGAAGATGTTCCTGTAGTGCAAGATTATCCTGATGTTTTTCCTGCAGAATTGTCAGGGATGCCACCTGAGCATGATGTAGAGTTTCGTATTGATCTTGTTCCTGGCCTTGGTTGTGTTCTTATGCAAGAGGGCAATGTTATAGCTTATGCGTCTAGGCAGTTAAAGAAGCATGAGCAGAATTACCCCACTCATGATCTTGAGCTTGCAGCAGTGGTCTTTGCTCTCAAAATTTGGAGGCACTACCTGTATGGAGAATCTTGTGATATTTTCACTGATCATAAGAGTCTGAAATACATCTTCACTCAGAAGGATTTGAACTTAAGACAGAGGAGGTGGCTGGAGTTGATTAAAGATTACGACCTCAACATTCAATATACACCGGGTAAGGCGAATGTGGTTGCAGATGCTTTAAGCCATAAGGTCATTCCTCCAACCAAAGCTGAAGTCAAGAAAGAGATTTTGCGAGAAGCACACCGAACACCATATACTGTGCATCCTGGGGAGAACAAGAAGTATCATGATCTGAAGAAGATCTATTTGTGGAAGAGGATGAAAGTGGATGTGGCCAAGTACGTGGCATCATGTGGGGAATGTCAGCAAGTAAAGGCTGAACATAAGAGTCCTATTGGAAAGTTACAATCATTGGAAGTTCCTGTATGGCCTTGGGATGATATTGCTATGGATTTCGTGGTTGGGCTTCCTCGAACTCCACAAGGAAAGGACGTCATCTGGGTGGTTGTAGATCGTCTGAGTAAGGTGGCACATTTCATTCTTATCCGCATCACTTATTCTGCGAGTGACTTGGCACCGATCTATACATGCGAGGTAGTGAGGTTACATGGTGTGCCCCGCTCGATTGTTTCTGATAGGGATGCTAAGTTTTCTTCTAAGTTCTGGGATTCTGTGCAAGAGGCATTTGATACTCAATTGAAATTCAGTACGGCTTTTCACCCTCAGACTGATGGTCAATCTGAGCAGACTATTCAAACTTTAGAGGATATGTTGAGATCATGTATCCTTTCATGGAAAGGCAGTTGGGAGGATCATTTGCCACTTGTAGAATTTGCTTATAACAATAGTTTCCATGCTAGCATTCGAATGGCACCATATGAGGCACTTTATGGAAGAAAGTGTCGATCCCCATTGTGTTGGGATTCCATAGGGGAGAGAGCTATGTTAGGACCCGATTGGGTTCAACAGACCACAGAACGGATAGCAGAAATACGACAACACATGCTTGCAGCTCAAAGTAGGCAGAAGAGCTACGCCGATGTCAGACGACCGGAATTAGAGTTTGAAGTGGGCGATCAAGTACTTCTAAAGGTATCTCCTTCCAAAGATGTTGTGAGATTTGGAACGAAAGGCAAACTCAGCCCCAGGTATATTGGTCCATTCTTGATAGTGGAAAGAGTTGGAATCCTAGCGTATCGCCTTGAGTTACCAGAGTCCATGAAAGGTGTACATGATGTATTCCATATTTCCGTGTTGAGAAAATATTTGAGAGACCCTGAACATCATATCACCATAGAGCCGGTGACCATTGAGCAAAATTTGACATTTGAGTCTCGCCCTGTAAGAATATTGGTGGAATCTGAGAGGGTGCTCAGGCATATAACTATCAAGTATGTCAAGGTTCTTTGGACGCACCAGACCGAGCGAGAAGCCACATGGGAACTTGAGTCACAGATGCGGTGA
More
|
||||||||||
| Protein seq | MRLRILSVIVRITNRGRGRGCAGGRGRGRGRGRHNEAASSNQMEDEHMEEEEGDSHSAAVSDDAPRAAPGMTLTRWTSMRLDTFDVSGTPVNAADWLHKMEKYMRGSRMTPEEKVTFMPFQLTGQADIWWDGVVEAWNPDHGAITWEVFLQQFRAKYYPESFRDKMSNELNNIQQGSKTVDEYEREFNSIVCFVPSVASDEREKARKFSRGLIARYREVMGRNPPTIYLNAVEEARGMEVELQITTAQKNRSGNVTGKGLFCFKCGKNHHSAECGFTEACRGCGKAGHMELVCKRNPNSIIKWQKPSSYSATSSTASYPRGSGSSTSTPRGAVQMMTAYPLPYQQFTHNYPPPPLPGQYWSMPQSLAPRAPLQLPASPMAQPSASAPPHQQASGSTTPAMARVYNMPATSSLGRPDVVAGTLSVDLHDALVLFDSVATFSFVSIEFAKRANLFSQEVSRSVQVSSPGGIISSSVKTITLESPSGEEMVFQGSTPPHSIFVMARLFPGQRAVKTGLLWALAEKASKPLLIEDVPVVQDYPDVFPAELSGMPPEHDVEFRIDLVPGLGCVLMQEGNVIAYASRQLKKHEQNYPTHDLELAAVVFALKIWRHYLYGESCDIFTDHKSLKYIFTQKDLNLRQRRWLELIKDYDLNIQYTPGKANVVADALSHKVIPPTKAEVKKEILREAHRTPYTVHPGENKKYHDLKKIYLWKRMKVDVAKYVASCGECQQVKAEHKSPIGKLQSLEVPVWPWDDIAMDFVVGLPRTPQGKDVIWVVVDRLSKVAHFILIRITYSASDLAPIYTCEVVRLHGVPRSIVSDRDAKFSSKFWDSVQEAFDTQLKFSTAFHPQTDGQSEQTIQTLEDMLRSCILSWKGSWEDHLPLVEFAYNNSFHASIRMAPYEALYGRKCRSPLCWDSIGERAMLGPDWVQQTTERIAEIRQHMLAAQSRQKSYADVRRPELEFEVGDQVLLKVSPSKDVVRFGTKGKLSPRYIGPFLIVERVGILAYRLELPESMKGVHDVFHISVLRKYLRDPEHHITIEPVTIEQNLTFESRPVRILVESERVLRHITIKYVKVLWTHQTEREATWELESQMR |
||||||||||
| Function | Transposon Tf2-9 polyprotein [UniProtKB/Swiss-Prot:P0CT40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0033000 | OsMH63_09T0033000-mRNA-1 | Chr09 | 2544821 | 2549581 | + | maker | ||
| CDS seq | ATGCGCTTGCGGATTTTATCTGTGATCGTAAGAATTACCAACAGAGGTCGTGGTAGGGGCTGTGCTGGAGGCCGTGGAAGAGGTCGTGGTAGAGGTCGCCATAATGAGGCAGCATCCTCGAACCAGATGGAGGATGAGCACATGGAAGAGGAAGAGGGTGATAGCCACTCAGCTGCTGTCTCTGATGATGCTCCTCGAGCTGCTCCGGGGATGACACTCACTAGATGGACATCCATGCGCTTAGACACATTTGATGTGTCTGGTACTCCCGTTAATGCTGCAGACTGGTTACACAAGATGGAGAAGTATATGAGGGGATCTAGAATGACTCCTGAGGAGAAGGTTACTTTCATGCCTTTTCAGTTGACTGGTCAGGCGGACATTTGGTGGGATGGAGTTGTTGAAGCATGGAACCCTGACCATGGTGCTATTACTTGGGAAGTTTTTCTTCAGCAGTTCAGAGCTAAGTATTATCCAGAATCATTTAGGGACAAGATGAGTAATGAGTTAAACAATATCCAACAGGGAAGCAAGACTGTTGATGAGTATGAACGGGAGTTCAACAGTATTGTATGCTTTGTGCCTAGCGTGGCAAGTGATGAGCGTGAGAAGGCTAGAAAGTTTTCTCGAGGGCTCATTGCCCGATATAGAGAAGTGATGGGAAGAAACCCACCTACTATATACCTCAATGCAGTTGAGGAGGCTCGAGGGATGGAGGTTGAGCTCCAAATTACTACTGCACAGAAGAATCGTTCTGGCAATGTCACTGGGAAAGGGCTATTTTGCTTTAAGTGTGGAAAGAATCACCATTCAGCAGAGTGTGGGTTTACTGAGGCATGTCGTGGGTGTGGCAAGGCTGGACACATGGAGTTGGTATGTAAGCGTAACCCAAATTCTATCATCAAGTGGCAAAAGCCGAGCTCCTATTCAGCAACCTCTTCGACAGCTAGCTATCCTCGAGGTTCAGGTTCTTCCACTAGTACACCCCGCGGTGCCGTTCAGATGATGACAGCTTATCCACTTCCTTACCAGCAGTTCACACATAATTACCCACCACCACCATTACCAGGACAGTATTGGTCCATGCCTCAATCTCTTGCTCCACGTGCTCCACTCCAGTTGCCTGCATCGCCTATGGCGCAACCTTCTGCTTCAGCTCCACCTCACCAGCAAGCCTCAGGCTCTACTACCCCAGCTATGGCAAGAGTCTACAACATGCCTGCAACTTCATCCCTTGGTCGCCCGGATGTCGTTGCAGGTACACTTTCAGTTGATTTGCATGATGCTCTAGTTCTATTTGATTCTGTTGCTACATTTTCCTTTGTTTCAATTGAGTTTGCGAAAAGAGCTAATCTATTTAGTCAAGAGGTCTCTCGATCTGTCCAAGTCAGCTCTCCAGGGGGTATAATCTCTAGTTCAGTAAAGACTATTACCTTGGAATCTCCATCAGGCGAGGAGATGGTTTTCCAAGGGAGCACGCCTCCGCATTCTATTTTCGTGATGGCAAGGTTATTTCCTGGGCAACGTGCTGTAAAGACAGGGTTATTATGGGCCTTAGCCGAGAAGGCATCCAAGCCTTTATTGATTGAAGATGTTCCTGTAGTGCAAGATTATCCTGATGTTTTTCCTGCAGAATTGTCAGGGATGCCACCTGAGCATGATGTAGAGTTTCGTATTGATCTTGTTCCTGGCCTTGGTTGTGTTCTTATGCAAGAGGGCAATGTTATAGCTTATGCGTCTAGGCAGTTAAAGAAGCATGAGCAGAATTACCCCACTCATGATCTTGAGCTTGCAGCAGTGGTCTTTGCTCTCAAAATTTGGAGGCACTACCTGTATGGAGAATCTTGTGATATTTTCACTGATCATAAGAGTCTGAAATACATCTTCACTCAGAAGGATTTGAACTTAAGACAGAGGAGGTGGCTGGAGTTGATTAAAGATTACGACCTCAACATTCAATATACACCGGGTAAGGCGAATGTGGTTGCAGATGCTTTAAGCCATAAGGTCATTCCTCCAACCAAAGCTGAAGTCAAGAAAGAGATTTTGCGAGAAGCACACCGAACACCATATACTGTGCATCCTGGGGAGAACAAGAAGTATCATGATCTGAAGAAGATCTATTTGTGGAAGAGGATGAAAGTGGATGTGGCCAAGTACGTGGCATCATGTGGGGAATGTCAGCAAGTAAAGGCTGAACATAAGAGTCCTATTGGAAAGTTACAATCATTGGAAGTTCCTGTATGGCCTTGGGATGATATTGCTATGGATTTCGTGGTTGGGCTTCCTCGAACTCCACAAGGAAAGGACGTCATCTGGGTGGTTGTAGATCGTCTGAGTAAGGTGGCACATTTCATTCTTATCCGCATCACTTATTCTGCGAGTGACTTGGCACCGATCTATACATGCGAGGTAGTGAGGTTACATGGTGTGCCCCGCTCGATTGTTTCTGATAGGGATGCTAAGTTTTCTTCTAAGTTCTGGGATTCTGTGCAAGAGGCATTTGATACTCAATTGAAATTCAGTACGGCTTTTCACCCTCAGACTGATGGTCAATCTGAGCAGACTATTCAAACTTTAGAGGATATGTTGAGATCATGTATCCTTTCATGGAAAGGCAGTTGGGAGGATCATTTGCCACTTGTAGAATTTGCTTATAACAATAGTTTCCATGCTAGCATTCGAATGGCACCATATGAGGCACTTTATGGAAGAAAGTGTCGATCCCCATTGTGTTGGGATTCCATAGGGGAGAGAGCTATGTTAGGACCCGATTGGGTTCAACAGACCACAGAACGGATAGCAGAAATACGACAACACATGCTTGCAGCTCAAAGTAGGCAGAAGAGCTACGCCGATGTCAGACGACCGGAATTAGAGTTTGAAGTGGGCGATCAAGTACTTCTAAAGGTATCTCCTTCCAAAGATGTTGTGAGATTTGGAACGAAAGGCAAACTCAGCCCCAGGTATATTGGTCCATTCTTGATAGTGGAAAGAGTTGGAATCCTAGCGTATCGCCTTGAGTTACCAGAGTCCATGAAAGGTGTACATGATGTATTCCATATTTCCGTGTTGAGAAAATATTTGAGAGACCCTGAACATCATATCACCATAGAGCCGGTGACCATTGAGCAAAATTTGACATTTGAGTCTCGCCCTGTAAGAATATTGGTGGAATCTGAGAGGGTGCTCAGGCATATAACTATCAAGTATGTCAAGGTTCTTTGGACGCACCAGACCGAGCGAGAAGCCACATGGGAACTTGAGTCACAGATGCGGTGA
More
|
|||||||
| Protein seq | MRLRILSVIVRITNRGRGRGCAGGRGRGRGRGRHNEAASSNQMEDEHMEEEEGDSHSAAVSDDAPRAAPGMTLTRWTSMRLDTFDVSGTPVNAADWLHKMEKYMRGSRMTPEEKVTFMPFQLTGQADIWWDGVVEAWNPDHGAITWEVFLQQFRAKYYPESFRDKMSNELNNIQQGSKTVDEYEREFNSIVCFVPSVASDEREKARKFSRGLIARYREVMGRNPPTIYLNAVEEARGMEVELQITTAQKNRSGNVTGKGLFCFKCGKNHHSAECGFTEACRGCGKAGHMELVCKRNPNSIIKWQKPSSYSATSSTASYPRGSGSSTSTPRGAVQMMTAYPLPYQQFTHNYPPPPLPGQYWSMPQSLAPRAPLQLPASPMAQPSASAPPHQQASGSTTPAMARVYNMPATSSLGRPDVVAGTLSVDLHDALVLFDSVATFSFVSIEFAKRANLFSQEVSRSVQVSSPGGIISSSVKTITLESPSGEEMVFQGSTPPHSIFVMARLFPGQRAVKTGLLWALAEKASKPLLIEDVPVVQDYPDVFPAELSGMPPEHDVEFRIDLVPGLGCVLMQEGNVIAYASRQLKKHEQNYPTHDLELAAVVFALKIWRHYLYGESCDIFTDHKSLKYIFTQKDLNLRQRRWLELIKDYDLNIQYTPGKANVVADALSHKVIPPTKAEVKKEILREAHRTPYTVHPGENKKYHDLKKIYLWKRMKVDVAKYVASCGECQQVKAEHKSPIGKLQSLEVPVWPWDDIAMDFVVGLPRTPQGKDVIWVVVDRLSKVAHFILIRITYSASDLAPIYTCEVVRLHGVPRSIVSDRDAKFSSKFWDSVQEAFDTQLKFSTAFHPQTDGQSEQTIQTLEDMLRSCILSWKGSWEDHLPLVEFAYNNSFHASIRMAPYEALYGRKCRSPLCWDSIGERAMLGPDWVQQTTERIAEIRQHMLAAQSRQKSYADVRRPELEFEVGDQVLLKVSPSKDVVRFGTKGKLSPRYIGPFLIVERVGILAYRLELPESMKGVHDVFHISVLRKYLRDPEHHITIEPVTIEQNLTFESRPVRILVESERVLRHITIKYVKVLWTHQTEREATWELESQMR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0033000 | OsMH63_09T0033000-mRNA-2 | Chr09 | 2545997 | 2549581 | + | maker | ||
| CDS seq | ATGATGACAGCTTATCCACTTCCTTACCAGCAGTTCACACATAATTACCCACCACCACCATTACCAGGACAGTATTGGTCCATGCCTCAATCTCTTGCTCCACGTGCTCCACTCCAGTTGCCTGCATCGCCTATGGCGCAACCTTCTGCTTCAGCTCCACCTCACCAGCAAGCCTCAGGCTCTACTACCCCAGCTATGGCAAGAGTCTACAACATGCCTGCAACTTCATCCCTTGGTCGCCCGGATGTCGTTGCAGAATTGTCAGGGATGCCACCTGAGCATGATGTAGAGTTTCGTATTGATCTTGTTCCTGGCCTTGGTTGTGTTCTTATGCAAGAGGGCAATGTTATAGCTTATGCGTCTAGGCAGTTAAAGAAGCATGAGCAGAATTACCCCACTCATGATCTTGAGCTTGCAGCAGTGGTCTTTGCTCTCAAAATTTGGAGGCACTACCTGTATGGAGAATCTTGTGATATTTTCACTGATCATAAGAGTCTGAAATACATCTTCACTCAGAAGGATTTGAACTTAAGACAGAGGAGGTGGCTGGAGTTGATTAAAGATTACGACCTCAACATTCAATATACACCGGGTAAGGCGAATGTGGTTGCAGATGCTTTAAGCCATAAGGTCATTCCTCCAACCAAAGCTGAAGTCAAGAAAGAGATTTTGCGAGAAGCACACCGAACACCATATACTGTGCATCCTGGGGAGAACAAGAAGTATCATGATCTGAAGAAGATCTATTTGTGGAAGAGGATGAAAGTGGATGTGGCCAAGTACGTGGCATCATGTGGGGAATGTCAGCAAGTAAAGGCTGAACATAAGAGTCCTATTGGAAAGTTACAATCATTGGAAGTTCCTGTATGGCCTTGGGATGATATTGCTATGGATTTCGTGGTTGGGCTTCCTCGAACTCCACAAGGAAAGGACGTCATCTGGGTGGTTGTAGATCGTCTGAGTAAGGTGGCACATTTCATTCTTATCCGCATCACTTATTCTGCGAGTGACTTGGCACCGATCTATACATGCGAGGTAGTGAGGTTACATGGTGTGCCCCGCTCGATTGTTTCTGATAGGGATGCTAAGTTTTCTTCTAAGTTCTGGGATTCTGTGCAAGAGGCATTTGATACTCAATTGAAATTCAGTACGGCTTTTCACCCTCAGACTGATGGTCAATCTGAGCAGACTATTCAAACTTTAGAGGATATGTTGAGATCATGTATCCTTTCATGGAAAGGCAGTTGGGAGGATCATTTGCCACTTGTAGAATTTGCTTATAACAATAGTTTCCATGCTAGCATTCGAATGGCACCATATGAGGCACTTTATGGAAGAAAGTGTCGATCCCCATTGTGTTGGGATTCCATAGGGGAGAGAGCTATGTTAGGACCCGATTGGGTTCAACAGACCACAGAACGGATAGCAGAAATACGACAACACATGCTTGCAGCTCAAAGTAGGCAGAAGAGCTACGCCGATGTCAGACGACCGGAATTAGAGTTTGAAGTGGGCGATCAAGTACTTCTAAAGGTATCTCCTTCCAAAGATGTTGTGAGATTTGGAACGAAAGGCAAACTCAGCCCCAGGTATATTGGTCCATTCTTGATAGTGGAAAGAGTTGGAATCCTAGCGTATCGCCTTGAGTTACCAGAGTCCATGAAAGGTGTACATGATGTATTCCATATTTCCGTGTTGAGAAAATATTTGAGAGACCCTGAACATCATATCACCATAGAGCCGGTGACCATTGAGCAAAATTTGACATTTGAGTCTCGCCCTGTAAGAATATTGGTGGAATCTGAGAGGGTGCTCAGGCATATAACTATCAAGTATGTCAAGGTTCTTTGGACGCACCAGACCGAGCGAGAAGCCACATGGGAACTTGAGTCACAGATGCGGTGA
More
|
|||||||
| Protein seq | MMTAYPLPYQQFTHNYPPPPLPGQYWSMPQSLAPRAPLQLPASPMAQPSASAPPHQQASGSTTPAMARVYNMPATSSLGRPDVVAELSGMPPEHDVEFRIDLVPGLGCVLMQEGNVIAYASRQLKKHEQNYPTHDLELAAVVFALKIWRHYLYGESCDIFTDHKSLKYIFTQKDLNLRQRRWLELIKDYDLNIQYTPGKANVVADALSHKVIPPTKAEVKKEILREAHRTPYTVHPGENKKYHDLKKIYLWKRMKVDVAKYVASCGECQQVKAEHKSPIGKLQSLEVPVWPWDDIAMDFVVGLPRTPQGKDVIWVVVDRLSKVAHFILIRITYSASDLAPIYTCEVVRLHGVPRSIVSDRDAKFSSKFWDSVQEAFDTQLKFSTAFHPQTDGQSEQTIQTLEDMLRSCILSWKGSWEDHLPLVEFAYNNSFHASIRMAPYEALYGRKCRSPLCWDSIGERAMLGPDWVQQTTERIAEIRQHMLAAQSRQKSYADVRRPELEFEVGDQVLLKVSPSKDVVRFGTKGKLSPRYIGPFLIVERVGILAYRLELPESMKGVHDVFHISVLRKYLRDPEHHITIEPVTIEQNLTFESRPVRILVESERVLRHITIKYVKVLWTHQTEREATWELESQMR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0033000 | OsMH63_09T0033000-mRNA-3 | Chr09 | 2545997 | 2549581 | + | maker | ||
| CDS seq | ATGATGACAGCTTATCCACTTCCTTACCAGCAGTTCACACATAATTACCCACCACCACCATTACCAGGACAGTATTGGTCCATGCCTCAATCTCTTGCTCCACGTGCTCCACTCCAGTTGCCTGCATCGCCTATGGCGCAACCTTCTGCTTCAGCTCCACCTCACCAGCAAGCCTCAGGCTCTACTACCCCAGCTATGGCAAGAGTCTACAACATGCCTGCAACTTCATCCCTTGGTCGCCCGGATGTCGTTGCAGAATTGTCAGGGATGCCACCTGAGCATGATGTAGAGTTTCGTATTGATCTTGTTCCTGGCCTTGGTTGTGTTCTTATGCAAGAGGGCAATGTTATAGCTTATGCGTCTAGGCAGTTAAAGAAGCATGAGCAGAATTACCCCACTCATGATCTTGAGCTTGCAGCAGTGGTCTTTGCTCTCAAAATTTGGAGGCACTACCTGTATGGAGAATCTTGTGATATTTTCACTGATCATAAGAGTCTGAAATACATCTTCACTCAGAAGGATTTGAACTTAAGACAGAGGAGGTGGCTGGAGTTGATTAAAGATTACGACCTCAACATTCAATATACACCGGGTAAGGCGAATGTGGTTGCAGATGCTTTAAGCCATAAGGTCATTCCTCCAACCGTGAGTTGTTTCATAACTGATTTTGAACGGATGGATATCTCCTATTGTTATGCCGGAGTGGCGAGTACCGAGTCACGAGTCATTCTTGAGTCCGCCATACCCCAACGAGTGCTAGAGGCCCAACAACACGATCAGTTGCTACAACAAGTTAAGAAACGCGTAAAGGAAGGAAAAATTGGAGATTTCACTTTGGATTCCTTGGGAGTTGTGCGATTCCATGGGCGTTTATGTGTTCAACAGAAAGCTGAAGTCAAGAAAGAGATTTTGCGAGAAGCACACCGAACACCATATACTGTGCATCCTGGGGAGAACAAGAAGTATCATGATCTGAAGAAGATCTATTTGTGGAAGAGGATGAAAGTGGATGTGGCCAAGTACGTGGCATCATGTGGGGAATGTCAGCAAGTAAAGGCTGAACATAAGAGTCCTATTGGAAAGTTACAATCATTGGAAGTTCCTGTATGGCCTTGGGATGATATTGCTATGGATTTCGTGGTTGGGCTTCCTCGAACTCCACAAGGAAAGGACGTCATCTGGGTGGTTGTAGATCGTCTGAGTAAGGTGGCACATTTCATTCTTATCCGCATCACTTATTCTGCGAGTGACTTGGCACCGATCTATACATGCGAGGTAGTGAGGTTACATGGTGTGCCCCGCTCGATTGTTTCTGATAGGGATGCTAAGTTTTCTTCTAAGTTCTGGGATTCTGTGCAAGAGGCATTTGATACTCAATTGAAATTCAGTACGGCTTTTCACCCTCAGACTGATGGTCAATCTGAGCAGACTATTCAAACTTTAGAGGATATGTTGAGATCATGTATCCTTTCATGGAAAGGCAGTTGGGAGGATCATTTGCCACTTGTAGAATTTGCTTATAACAATAGTTTCCATGCTAGCATTCGAATGGCACCATATGAGGCACTTTATGGAAGAAAGTGTCGATCCCCATTGTGTTGGGATTCCATAGGGGAGAGAGCTATGTTAGGACCCGATTGGGTTCAACAGACCACAGAACGGATAGCAGAAATACGACAACACATGCTTGCAGCTCAAAGTAGGCAGAAGAGCTACGCCGATGTCAGACGACCGGAATTAGAGTTTGAAGTGGGCGATCAAGTACTTCTAAAGGTATCTCCTTCCAAAGATGTTGTGAGATTTGGAACGAAAGGCAAACTCAGCCCCAGGTATATTGGTCCATTCTTGATAGTGGAAAGAGTTGGAATCCTAGCGTATCGCCTTGAGTTACCAGAGTCCATGAAAGGTGTACATGATGTATTCCATATTTCCGTGTTGAGAAAATATTTGAGAGACCCTGAACATCATATCACCATAGAGCCGGTGACCATTGAGCAAAATTTGACATTTGAGTCTCGCCCTGTAAGAATATTGGTGGAATCTGAGAGGGTGCTCAGGCATATAACTATCAAGTATGTCAAGGTTCTTTGGACGCACCAGACCGAGCGAGAAGCCACATGGGAACTTGAGTCACAGATGCGGTGA
More
|
|||||||
| Protein seq | MMTAYPLPYQQFTHNYPPPPLPGQYWSMPQSLAPRAPLQLPASPMAQPSASAPPHQQASGSTTPAMARVYNMPATSSLGRPDVVAELSGMPPEHDVEFRIDLVPGLGCVLMQEGNVIAYASRQLKKHEQNYPTHDLELAAVVFALKIWRHYLYGESCDIFTDHKSLKYIFTQKDLNLRQRRWLELIKDYDLNIQYTPGKANVVADALSHKVIPPTVSCFITDFERMDISYCYAGVASTESRVILESAIPQRVLEAQQHDQLLQQVKKRVKEGKIGDFTLDSLGVVRFHGRLCVQQKAEVKKEILREAHRTPYTVHPGENKKYHDLKKIYLWKRMKVDVAKYVASCGECQQVKAEHKSPIGKLQSLEVPVWPWDDIAMDFVVGLPRTPQGKDVIWVVVDRLSKVAHFILIRITYSASDLAPIYTCEVVRLHGVPRSIVSDRDAKFSSKFWDSVQEAFDTQLKFSTAFHPQTDGQSEQTIQTLEDMLRSCILSWKGSWEDHLPLVEFAYNNSFHASIRMAPYEALYGRKCRSPLCWDSIGERAMLGPDWVQQTTERIAEIRQHMLAAQSRQKSYADVRRPELEFEVGDQVLLKVSPSKDVVRFGTKGKLSPRYIGPFLIVERVGILAYRLELPESMKGVHDVFHISVLRKYLRDPEHHITIEPVTIEQNLTFESRPVRILVESERVLRHITIKYVKVLWTHQTEREATWELESQMR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.145462 | 0.6267135 | 0.0864435 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g04410 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0044700 | RBH | 0.019692 | 0.3413615 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
