Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0434100 | OGI:08077740 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:29153591-29154576 | ||||||||
| Gene Symbol | ERF28, OsERF#028, OsERF028, OsERF28, OsERF#029, OsERF029, OsERF29, ERF29, DERF4, OsDERF4, AP2/EREBP#161, AP2/EREBP161, OsDREB1J, OsDREB1I, OsDREB1G | ||||||||||
| DNA seq | TAGTCTTTGATTATGCATGACATTTTTTTATAATTTCACTCTCGATCACTCAAAACATGCCGAAATGAGGAAACCGTACCTAGGAATCAAAGATTCCAGAGGTAGGAAAAATGTACAGGGATCAAAAAAAAAAAAAAAAACCCTATATACAAGGCCATACATGCTCAGCTGCTGTTAATTAGGAGGTCACTCTTTTATGTACAAGAGCATGACGCGCGTCTGCTTCAATGCTAGTAGCTCCACAGAGACACGTCAGCGATGTCGCCTGAGTCGACGATGGCGTCGTCGTCGTCGTCGGACGATGCGCCGGAAGCCGGCGGCTCCATGAGGAGGCCCTCCGCTAAGCTCGCGTAGTACAGGCTCCAGCCCATGTCGCTCACCACATCCAGCTCGAACGGTGATGCCTCCTCGTCGGCGTCGGTCGTGCTGCTGCTGCTGGTGACGGCGTCGTCGTCGCTCGCGGCGGACGGCTCGGACGTGGCGGACATGGCGTCCTCGGCGACGACGTCGATGGCGAGTGGGAACACGGACGATGATGACTCCCGCTGCTCGAAGTCCTCCAGCGCCCGCGCCACGGCGCGCTGGACGTCGGCGGCGCAGCGGAGGGTGGCCGGGGGCGGCACGGCGAGCAGCCAGGCGGAGTCGGCGAAGTTGAGGCACGCGGCGGCGCGGCCGCGGAGCGCGAGCATGGCGGCGTCGTGGGCGCGCGCGGCGGCGTCGGCGGCGTCGAACGTGCCGAGCCAGAGCCTGCACCCGCGGCGGCCCGGCACGCGGACCTCGCACACCCACCGCCCCGCGCGGCCGCGGCGCCGCACGCCGCGGAACACCGGGTGGCGGGTCTCGTGGAACTTGGTGCGCCCCGCGGGGCGCTTGCTGCTGGGCGGCGAGAGGCGGCGGCACGGCTCCGACGACGACGTCGTGGAGGCGGCCTGCAATGCCGGCGGCGGCCACTCGCCGGTGATCTCCTCTAGTTTGCTCGTACACAT
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| CDS seq | ATGTGTACGAGCAAACTAGAGGAGATCACCGGCGAGTGGCCGCCGCCGGCATTGCAGGCCGCCTCCACGACGTCGTCGTCGGAGCCGTGCCGCCGCCTCTCGCCGCCCAGCAGCAAGCGCCCCGCGGGGCGCACCAAGTTCCACGAGACCCGCCACCCGGTGTTCCGCGGCGTGCGGCGCCGCGGCCGCGCGGGGCGGTGGGTGTGCGAGGTCCGCGTGCCGGGCCGCCGCGGGTGCAGGCTCTGGCTCGGCACGTTCGACGCCGCCGACGCCGCCGCGCGCGCCCACGACGCCGCCATGCTCGCGCTCCGCGGCCGCGCCGCCGCGTGCCTCAACTTCGCCGACTCCGCCTGGCTGCTCGCCGTGCCGCCCCCGGCCACCCTCCGCTGCGCCGCCGACGTCCAGCGCGCCGTGGCGCGGGCGCTGGAGGACTTCGAGCAGCGGGAGTCATCATCGTCCGTGTTCCCACTCGCCATCGACGTCGTCGCCGAGGACGCCATGTCCGCCACGTCCGAGCCGTCCGCCGCGAGCGACGACGACGCCGTCACCAGCAGCAGCAGCACGACCGACGCCGACGAGGAGGCATCACCGTTCGAGCTGGATGTGGTGAGCGACATGGGCTGGAGCCTGTACTACGCGAGCTTAGCGGAGGGCCTCCTCATGGAGCCGCCGGCTTCCGGCGCATCGTCCGACGACGACGACGACGCCATCGTCGACTCAGGCGACATCGCTGACGTGTCTCTGTGGAGCTACTAG
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| Protein seq | MCTSKLEEITGEWPPPALQAASTTSSSEPCRRLSPPSSKRPAGRTKFHETRHPVFRGVRRRGRAGRWVCEVRVPGRRGCRLWLGTFDAADAAARAHDAAMLALRGRAAACLNFADSAWLLAVPPPATLRCAADVQRAVARALEDFEQRESSSSVFPLAIDVVAEDAMSATSEPSAASDDDAVTSSSSTTDADEEASPFELDVVSDMGWSLYYASLAEGLLMEPPASGASSDDDDDAIVDSGDIADVSLWSY |
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| Function | Dehydration-responsive element-binding protein 1I [UniProtKB/Swiss-Prot:Q0J3Y6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0434100 | OsMH63_08T0434100.1 | Chr08 | 29153591 | 29154576 | - | maker | ||
| CDS seq | ATGTGTACGAGCAAACTAGAGGAGATCACCGGCGAGTGGCCGCCGCCGGCATTGCAGGCCGCCTCCACGACGTCGTCGTCGGAGCCGTGCCGCCGCCTCTCGCCGCCCAGCAGCAAGCGCCCCGCGGGGCGCACCAAGTTCCACGAGACCCGCCACCCGGTGTTCCGCGGCGTGCGGCGCCGCGGCCGCGCGGGGCGGTGGGTGTGCGAGGTCCGCGTGCCGGGCCGCCGCGGGTGCAGGCTCTGGCTCGGCACGTTCGACGCCGCCGACGCCGCCGCGCGCGCCCACGACGCCGCCATGCTCGCGCTCCGCGGCCGCGCCGCCGCGTGCCTCAACTTCGCCGACTCCGCCTGGCTGCTCGCCGTGCCGCCCCCGGCCACCCTCCGCTGCGCCGCCGACGTCCAGCGCGCCGTGGCGCGGGCGCTGGAGGACTTCGAGCAGCGGGAGTCATCATCGTCCGTGTTCCCACTCGCCATCGACGTCGTCGCCGAGGACGCCATGTCCGCCACGTCCGAGCCGTCCGCCGCGAGCGACGACGACGCCGTCACCAGCAGCAGCAGCACGACCGACGCCGACGAGGAGGCATCACCGTTCGAGCTGGATGTGGTGAGCGACATGGGCTGGAGCCTGTACTACGCGAGCTTAGCGGAGGGCCTCCTCATGGAGCCGCCGGCTTCCGGCGCATCGTCCGACGACGACGACGACGCCATCGTCGACTCAGGCGACATCGCTGACGTGTCTCTGTGGAGCTACTAG
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| Protein seq | MCTSKLEEITGEWPPPALQAASTTSSSEPCRRLSPPSSKRPAGRTKFHETRHPVFRGVRRRGRAGRWVCEVRVPGRRGCRLWLGTFDAADAAARAHDAAMLALRGRAAACLNFADSAWLLAVPPPATLRCAADVQRAVARALEDFEQRESSSSVFPLAIDVVAEDAMSATSEPSAASDDDAVTSSSSTTDADEEASPFELDVVSDMGWSLYYASLAEGLLMEPPASGASSDDDDDAIVDSGDIADVSLWSY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0431145 | 0.028191 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0565200 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g43210 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0565200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0024260 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0024040 | SBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0024040 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0024370 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0024010 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0342100 | RBH | 10.581579 | 228.6122745 | 2.5187155 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023860 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0453400 | SBH | 0.039021 | 0.63105 | 0.014159 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0023240 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023610 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0023420 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0024270 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0023500 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G023720 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023880 | SBH | 0.0 | 0.0 | 0.0 |
