Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0428200 | OGI:08076600 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:28790071-28793849 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCACCGAACTCGTATATATTATTTATTTCTTTTGGATATGTAATAACAACTGAAATTGTTAATAGCGCATTGTAGTAGTGCTATTTCATTCGTACCTTTTTAGTGAAGAGTTGGAGTGCTTGATCATTTTCTAGTCCACTGAGCTTGTATATATGTGCATTAGTTGTTTCTTTTGAACAATGCTTAGCAATATTCTCTTCCCTTGTGGTGACTATGATGCAGCTTCCAGCTTTGTTGGGAAATTGTGCCACCATATCATCCCATTCCTTGGTATCCCATAGATCATCGAGAACAACCAAATATCTCTTTCCTTCTAAGAGTTTGGACAAATCTCTCTCTTTCTCATTTCCAAACTGCTTAGCTAAGCTGTGAATGAGTTGCCCAGAGTTAAAAGGGCGCAATACTGTAACACAGGCACGTGCACCAAAATAACTGCTAACATCTTGACTTCGATATATATCTTGGACTAGAGCGGTTTTTCCAAGGCCACCCATTCCCCAAATAGAGATCACTTGAGATTGTTGACTCACTTGGTTTTTAATTAGCTTGATAATGTCAGATTTTTCTTTTGCACGACCGATGAGCTGAGATTCCTCCAAGGTTGATACCATCGTCTCAGTGCGACCGAGCTTTTTATTAGCTGTGAGATTGTTGTTACCATTAGTCGTGGTTATGTTTGAGCTAGAACTTGGCTCCACTAAGAGTGTTCCGTCTTGAGAGCCCTACACACAAGTGAGTTGTTAGGTATATATATACCCTTCCTTTACCAAAAACAATATTTTTCTTGTGTTTAAAGCTTGTAAATTTATTTATAAGGCCTTTTTTGGCAGGCCACAAATCTTGGCCCATCCCTCATGGAATCCTGGCCCACCCATGGAGAATGGGATGGGAATGAGGCCTGCCAAATAAGGCCTAAAAGATTTTGGACTATATGAAAAACTAAATAAATAATGTTTGTATGGTTTGGATCTCAAAGGAATTATATATCTGGTGACAATATTGCTGGATCAATGAAAGAAATAGATTTAGGTAGGCAAGGGATATGAACAAAGCCACAAAATTTGCACACTCAATGCATTAAAAAAAATCTTCCATAGTTGAAGTTATTTTGCAACATGATGATAAATTTCATAATTTTTTCCATGATGCATATAGTGACAACAAGTTTGTTTAGGGTTTTTATCTATCTACTCTTTCCATCTTAAAATATAGCTATATTTAGGATTTTTTTAGGGATTAACTATTAAGGAAAAGTGGAAAATCGAATCGGATAATGTTGTGACCAGTTGATATGAGAAAACATGTGGAGAAAGTAGTCATATTTTAAGATAAATTTTGAATGCTAAATGCATTATATGTTGGGGGGCCAAGAAGTATTTATCAAGACACATTTATCAACATCTAACAACTCTCAAGTCTATAATTTTATTTTTGTATGACACAAGTAATACTCTAAATCTCTAACTTGAAAATAAAAAGAATAAATTTCATAGAACCACAAATACTTTGGTTAAATTATCACAAAACTGCAGATTTAAGATAATGTATAAAAAACTACAGATTTAACACAAAATTTATTGGATAACTACAAATTTAACATGAAATTTATCACAGAACTATAAGTGGAGTATTTCTGTTTATCAAGTACGGGATTACCGGTTTGTCTCCTTAATAAAGAATTGAGGAATATGAGGTGAATCCCCTAGGAAACAACTAGAGTTTTTCAGATTCACTGGACAGAGAATAGTATCCTCTCACACTAGGTCACATTTTTCTTCCTCGTTAAGCAAGAAAGAAAGGAGAGTTTTCACAAGAAAGAACTACGATCAGTTTTGTAAGGCTATCTTACCGACCATCACTTATCCTTTGTATGTGCTGAAGACGCAAGTAGCCCAATGACAGGCATGTGTTGGAGGACAACATGCATAGGTCTTTTGGCAAAATTGGGGGCTTGTTGATCTGACCGTCAATGGTGGCGAGAATTTTGCATTTGGCCTCAACTATTATGCAGTATATGCCCCAAATCGACTTCCACCACTCCCTAATCGGATTAGGGATGGAGCGATGATTAGGGCAGCGGCGCAGTGCAATTTGAAAGTGGTGGAGTCGATATGAGATAATGTAGCGGAGGAGTCTAAATGCAATATTCTCGCTATAGTGGATGGCCACTTTAGCGCCCGAGCCATATCATGTGCACTTTGAACTTTGGGTGGTACATTAAACCAAGATTTTATATCTAAATGTGTATTTTATAAGTTTATGAAATTAGATGACACCTTGATACAAGTTTAAGAACCAATCATGCATTTTTTTTAAAGAAAAGATGATAGAACATGGGTAACAGCATGTCAACTATAGTATGTTGGGCCGGATGAAAGTGGCGCCGACGTGTGAGACGACATCTATGAGACTACGACGGTAATTGCAGTTAACTGGGACCAACTAAGTAATCAGTATATCTTGTATATTTGCTAGTATTCTAGGTTTGAATGAAATTTAACTACATTAGAAGTTGAGCTAGATGAATAACTAGCTAGGTTGTACTGACTAACTAGATGATTTTAGTAGTTTAAAATTTACCTCCCCATTTAGTTTCAAAAAGAAAAAAAAGGTTACCTTCTCATAGAAAGCATAGATAATCTGATCATCGAGCAATTTCTTGTGCTCTGGGGGTACACTGTCTTGCGGTACACATAGTCTGGCAACTTCAACATGCTCTGTGCACAATATGATTCGGCTCCCTCTATCATTGCTTGGGAAGCATATTTTTATCTTATTCCACTCTTCCAGAGAGGATAAGTCAGTAAGCACAATCAAGTAACTCTTCTCATTCAGATATCCCTCAAATGCACTCACCAAATCATCTTCCTCCATGTTTCCCATCTTCTGTAGAATTCGGTCCACTAAATCAGTTGCTTCCATTTTAAATTCCCTAGTCTCTTGAAGAGAATTCTCGTACAATTGCCTGCTAATGCTCTGCAGCAACCATGTTTGATTGCAAAGACTTTTTAGCCTGATCCAAGCGTAGCACTCAAACTTCCTCATCTTGAGATCATCATAGGCCCTTCTGATAATAGATTTATCATCGAGAAGACCATTTTTTCTCCATACCCCGATCACTCTAAGCTCCTTGTCATTGGTGTTGATCAGTCCAACAAGATCCATTTTAGCTTTGTCCTGTTGCCGCCTTGTTTCTTCCAATTCAGACATGGTCGTTGCACCGGCAATCCTAGACTGCATGCCATCAGTTGCCTTGGAGGCAGAACCATCGATGAGGCGGTAGCGGTTGTTCCTCTGGCTGACATCCTCAACCTTGGCTCTTAGCTCCTTCATCTTCTGAGCCACACGACGCCGCTCAAGCAGCATTCTTGGGCTGCACTTGCGCCACCAAGATGGCTTCCCGACACGGACGGCCATGTCCTGGAGGCAGTCCTCGACATCGTAGGCGACATCACGGACCTGCTGCACCCAGGCCTTGACAACCTTGTGCTTGTCACGCTCCTCGTCCGCGGCCATGAGGAAGGCCTGCATCATATGGAGCTCGTCCCTGATGAAGGCATGGTCCCGCTGGATGCCGAGCTGCAGGGCCACCTCCTCCGCGACAGCGGATTGGGCGTAGCCAAGCGCTCCACTCAGCACGGACTTGCCAAGGCTCAGCACCGTCGACTCCATCACCACCCTGGCTCTCTCTCCCTCTCCACACACTGTACACACCCAACTCTTGGTTGATTTGTGCAGATTCTGTGGTTGAGGAAGTTGCAGCAGGCAGCTAGCGCAAT
More
|
||||||||||
| CDS seq | ATGGAGTCGACGGTGCTGAGCCTTGGCAAGTCCGTGCTGAGTGGAGCGCTTGGCTACGCCCAATCCGCTGTCGCGGAGGAGGTGGCCCTGCAGCTCGGCATCCAGCGGGACCATGCCTTCATCAGGGACGAGCTCCATATGATGCAGGCCTTCCTCATGGCCGCGGACGAGGAGCGTGACAAGCACAAGGTTGTCAAGGCCTGGGTGCAGCAGGTCCGTGATGTCGCCTACGATGTCGAGGACTGCCTCCAGGACATGGCCGTCCGTGTCGGGAAGCCATCTTGGTGGCGCAAGTGCAGCCCAAGAATGCTGCTTGAGCGGCGTCGTGTGGCTCAGAAGATGAAGGAGCTAAGAGCCAAGGTTGAGGATGTCAGCCAGAGGAACAACCGCTACCGCCTCATCGATGGTTCTGCCTCCAAGGCAACTGATGGCATGCAGTCTAGGATTGCCGGTGCAACGACCATGTCTGAATTGGAAGAAACAAGGCGGCAACAGGACAAAGCTAAAATGGATCTTGTTGGACTGATCAACACCAATGACAAGGAGCTTAGAGTGATCGGGGTATGGAGAAAAAATGGTCTTCTCGATGATAAATCTATTATCAGAAGGGCCTATGATGATCTCAAGATGAGGAAGTTTGAGTGCTACGCTTGGATCAGGCTAAAAAGTCTTTGCAATCAAACATGGTTGCTGCAGAGCATTAGCAGGCAATTGTACGAGAATTCTCTTCAAGAGACTAGGGAATTTAAAATGGAAGCAACTGATTTAGTGGACCGAATTCTACAGAAGATGGGAAACATGGAGGAAGATGATTTGGTGAGTGCATTTGAGGGATATCTGAATGAGAAGAGTTACTTGATTGTGCTTACTGACTTATCCTCTCTGGAAGAGTGGAATAAGATAAAAATATGCTTCCCAAGCAATGATAGAGGGAGCCGAATCATATTGTGCACAGAGCATGTTGAAGTTGCCAGACTATGTGTACCGCAAGACAGTGTACCCCCAGAGCACAAGAAATTGCTCGATGATCAGATTATCTATGCTTTCTATGAGAAGGGCTCTCAAGACGGAACACTCTTAGTGGAGCCAAGTTCTAGCTCAAACATAACCACGACTAATGGTAACAACAATCTCACAGCTAATAAAAAGCTCGGTCGCACTGAGACGATGGTATCAACCTTGGAGGAATCTCAGCTCATCGGTCGTGCAAAAGAAAAATCTGACATTATCAAGCTAATTAAAAACCAAGTGAGTCAACAATCTCAAGTGATCTCTATTTGGGGAATGGGTGGCCTTGGAAAAACCGCTCTAGTCCAAGATATATATCGAAGTCAAGATGTTAGCAGTTATTTTGGTGCACGTGCCTGTGTTACAGTATTGCGCCCTTTTAACTCTGGGCAACTCATTCACAGCTTAGCTAAGCAGTTTGGAAATGAGAAAGAGAGAGATTTGTCCAAACTCTTAGAAGGAAAGAGATATTTGGTTGTTCTCGATGATCTATGGGATACCAAGGAATGGGATGATATGGTGGCACAATTTCCCAACAAAGCTGGAAGCTGCATCATAGTCACCACAAGGGAAGAGAATATTGCTAAGCATTGTTCAAAAGAAACAACTAATGCACATATATACAAGCTCAGTGGACTAGAAAATGATCAAGCACTCCAACTCTTCACTAAAAAGGTACGAATGAAATAG
More
|
||||||||||
| Protein seq | MESTVLSLGKSVLSGALGYAQSAVAEEVALQLGIQRDHAFIRDELHMMQAFLMAADEERDKHKVVKAWVQQVRDVAYDVEDCLQDMAVRVGKPSWWRKCSPRMLLERRRVAQKMKELRAKVEDVSQRNNRYRLIDGSASKATDGMQSRIAGATTMSELEETRRQQDKAKMDLVGLINTNDKELRVIGVWRKNGLLDDKSIIRRAYDDLKMRKFECYAWIRLKSLCNQTWLLQSISRQLYENSLQETREFKMEATDLVDRILQKMGNMEEDDLVSAFEGYLNEKSYLIVLTDLSSLEEWNKIKICFPSNDRGSRIILCTEHVEVARLCVPQDSVPPEHKKLLDDQIIYAFYEKGSQDGTLLVEPSSSSNITTTNGNNNLTANKKLGRTETMVSTLEESQLIGRAKEKSDIIKLIKNQVSQQSQVISIWGMGGLGKTALVQDIYRSQDVSSYFGARACVTVLRPFNSGQLIHSLAKQFGNEKERDLSKLLEGKRYLVVLDDLWDTKEWDDMVAQFPNKAGSCIIVTTREENIAKHCSKETTNAHIYKLSGLENDQALQLFTKKVRMK |
||||||||||
| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0428200 | OsMH63_08T0428200.1 | Chr08 | 28790071 | 28793849 | - | maker | ||
| CDS seq | ATGGAGTCGACGGTGCTGAGCCTTGGCAAGTCCGTGCTGAGTGGAGCGCTTGGCTACGCCCAATCCGCTGTCGCGGAGGAGGTGGCCCTGCAGCTCGGCATCCAGCGGGACCATGCCTTCATCAGGGACGAGCTCCATATGATGCAGGCCTTCCTCATGGCCGCGGACGAGGAGCGTGACAAGCACAAGGTTGTCAAGGCCTGGGTGCAGCAGGTCCGTGATGTCGCCTACGATGTCGAGGACTGCCTCCAGGACATGGCCGTCCGTGTCGGGAAGCCATCTTGGTGGCGCAAGTGCAGCCCAAGAATGCTGCTTGAGCGGCGTCGTGTGGCTCAGAAGATGAAGGAGCTAAGAGCCAAGGTTGAGGATGTCAGCCAGAGGAACAACCGCTACCGCCTCATCGATGGTTCTGCCTCCAAGGCAACTGATGGCATGCAGTCTAGGATTGCCGGTGCAACGACCATGTCTGAATTGGAAGAAACAAGGCGGCAACAGGACAAAGCTAAAATGGATCTTGTTGGACTGATCAACACCAATGACAAGGAGCTTAGAGTGATCGGGGTATGGAGAAAAAATGGTCTTCTCGATGATAAATCTATTATCAGAAGGGCCTATGATGATCTCAAGATGAGGAAGTTTGAGTGCTACGCTTGGATCAGGCTAAAAAGTCTTTGCAATCAAACATGGTTGCTGCAGAGCATTAGCAGGCAATTGTACGAGAATTCTCTTCAAGAGACTAGGGAATTTAAAATGGAAGCAACTGATTTAGTGGACCGAATTCTACAGAAGATGGGAAACATGGAGGAAGATGATTTGGTGAGTGCATTTGAGGGATATCTGAATGAGAAGAGTTACTTGATTGTGCTTACTGACTTATCCTCTCTGGAAGAGTGGAATAAGATAAAAATATGCTTCCCAAGCAATGATAGAGGGAGCCGAATCATATTGTGCACAGAGCATGTTGAAGTTGCCAGACTATGTGTACCGCAAGACAGTGTACCCCCAGAGCACAAGAAATTGCTCGATGATCAGATTATCTATGCTTTCTATGAGAAGGGCTCTCAAGACGGAACACTCTTAGTGGAGCCAAGTTCTAGCTCAAACATAACCACGACTAATGGTAACAACAATCTCACAGCTAATAAAAAGCTCGGTCGCACTGAGACGATGGTATCAACCTTGGAGGAATCTCAGCTCATCGGTCGTGCAAAAGAAAAATCTGACATTATCAAGCTAATTAAAAACCAAGTGAGTCAACAATCTCAAGTGATCTCTATTTGGGGAATGGGTGGCCTTGGAAAAACCGCTCTAGTCCAAGATATATATCGAAGTCAAGATGTTAGCAGTTATTTTGGTGCACGTGCCTGTGTTACAGTATTGCGCCCTTTTAACTCTGGGCAACTCATTCACAGCTTAGCTAAGCAGTTTGGAAATGAGAAAGAGAGAGATTTGTCCAAACTCTTAGAAGGAAAGAGATATTTGGTTGTTCTCGATGATCTATGGGATACCAAGGAATGGGATGATATGGTGGCACAATTTCCCAACAAAGCTGGAAGCTGCATCATAGTCACCACAAGGGAAGAGAATATTGCTAAGCATTGTTCAAAAGAAACAACTAATGCACATATATACAAGCTCAGTGGACTAGAAAATGATCAAGCACTCCAACTCTTCACTAAAAAGGTACGAATGAAATAG
More
|
|||||||
| Protein seq | MESTVLSLGKSVLSGALGYAQSAVAEEVALQLGIQRDHAFIRDELHMMQAFLMAADEERDKHKVVKAWVQQVRDVAYDVEDCLQDMAVRVGKPSWWRKCSPRMLLERRRVAQKMKELRAKVEDVSQRNNRYRLIDGSASKATDGMQSRIAGATTMSELEETRRQQDKAKMDLVGLINTNDKELRVIGVWRKNGLLDDKSIIRRAYDDLKMRKFECYAWIRLKSLCNQTWLLQSISRQLYENSLQETREFKMEATDLVDRILQKMGNMEEDDLVSAFEGYLNEKSYLIVLTDLSSLEEWNKIKICFPSNDRGSRIILCTEHVEVARLCVPQDSVPPEHKKLLDDQIIYAFYEKGSQDGTLLVEPSSSSNITTTNGNNNLTANKKLGRTETMVSTLEESQLIGRAKEKSDIIKLIKNQVSQQSQVISIWGMGGLGKTALVQDIYRSQDVSSYFGARACVTVLRPFNSGQLIHSLAKQFGNEKERDLSKLLEGKRYLVVLDDLWDTKEWDDMVAQFPNKAGSCIIVTTREENIAKHCSKETTNAHIYKLSGLENDQALQLFTKKVRMK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.4150525 | 0.478164 | 0.1981385 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0539400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g42670 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0539400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023800 | RBH | 0.0 | 1.263842 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023610 | RBH | 0.0 | 0.000000 | 0.076976 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023590 | RBH | 0.0 | 0.539559 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0023940 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023590 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0427500 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023390 | RBH | 0.0 | 0.042137 | 0.015939 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0448500 | SBH | 0.1837225 | 0.1158555 | 0.102834 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0022790 | SBH | 0.0 | 0.055270 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023200 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0023020 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023850 | RBH | 0.0 | 0.062494 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0023090 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G023280 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023410 | SBH | 0.0 | 0.0 | 0.0 |
