Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0410500 | OGI:08073800 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:27590712-27591659 | ||||||||
| Gene Symbol | C10122 | ||||||||||
| DNA seq | ATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGACTCTACAACATCGTCATCATCTCCTTCTACAGCCTCTTCGGCCATGGCCGCTACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAATCCGCCGCCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCGCCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGGCGCTGGAAACCTACCTTTTCCGGCGAATCCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCGCCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAA
More
|
||||||||||
| CDS seq | ATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGACTCTACAACATCGTCATCATCTCCTTCTACAGCCTCTTCGGCCATGGCCGCTACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAATCCGCCGCCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCGCCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGGCGCTGGAAACCTACCTTTTCCGGCGAATCCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCGCCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAA
More
|
||||||||||
| Protein seq | MASEQQRRRSPPTILAAILLLSFLATANLAGAIDPAGRRRNVVVFWGGNKNEGSLRSVCDSGLYNIVIISFYSLFGHGRYWDDLSGHDLRHIGADITHCHFKAVYVLLSIGGGDGKDYSLPSSKSAADVADNLYNSFLGGSRPGVYHPFGDDVTVVGIDFFIDRGQPDHYYEIAERINYDTRHWRDPIGFKLTATVSCAYDDSDPRMKKALETYLFRRIHVRFYDDPRCSYNHAGLAGVMAQWNRWSASYPYNGKIYLGLAAANLTGKNDMVAVGELYRKLLPAVQKTDTYGGVMLWNSYYDSITHYGRYVSAWA |
||||||||||
| Function | Xylanase inhibitor protein 1 [UniProtKB/Swiss-Prot:Q7GCM7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0410500 | OsMH63_08T0410500.1 | Chr08 | 27590712 | 27591659 | + | maker | ||
| CDS seq | ATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGACTCTACAACATCGTCATCATCTCCTTCTACAGCCTCTTCGGCCATGGCCGCTACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAATCCGCCGCCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCGCCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGGCGCTGGAAACCTACCTTTTCCGGCGAATCCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCGCCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAA
More
|
|||||||
| Protein seq | MASEQQRRRSPPTILAAILLLSFLATANLAGAIDPAGRRRNVVVFWGGNKNEGSLRSVCDSGLYNIVIISFYSLFGHGRYWDDLSGHDLRHIGADITHCHFKAVYVLLSIGGGDGKDYSLPSSKSAADVADNLYNSFLGGSRPGVYHPFGDDVTVVGIDFFIDRGQPDHYYEIAERINYDTRHWRDPIGFKLTATVSCAYDDSDPRMKKALETYLFRRIHVRFYDDPRCSYNHAGLAGVMAQWNRWSASYPYNGKIYLGLAAANLTGKNDMVAVGELYRKLLPAVQKTDTYGGVMLWNSYYDSITHYGRYVSAWA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0420995 | 0.995877 | 33.1635425 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0518900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g40690 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0518900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0022330 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0022220 | RBH | 0.000000 | 3.355242 | 0.664057 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0022110 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0022210 | RBH | 0.0 | 0.041834 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0022100 | RBH | 0.0 | 7.171383 | 0.821102 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0022010 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0431600 | RBH | 0.17043 | 2.2451685 | 0.1345635 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0021360 | RBH | 0.0 | 0.782181 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0021660 | RBH | 0.018603 | 40.326168 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021480 | RBH | 0.0 | 13.119416 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0022310 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0021670 | RBH | 0.0 | 2.046373 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021840 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0022010 | RBH | 0.0 | 2.558226 | 1.113355 |
